List of works - Heather K Allen

Altered egos: antibiotic effects on food animal microbiomes

scientific article

Antibiotic resistance gene discovery in food-producing animals.

scientific article published on June 2014

Antibiotics in feed induce prophages in swine fecal microbiomes

scientific article

Bacteria, phages and pigs: the effects of in-feed antibiotics on the microbiome at different gut locations.

scientific article

Butyrate-producing bacteria, including mucin degraders, from the swine intestinal tract.

scientific article published on 12 April 2013

Butyricicoccus porcorum sp. nov., a butyrate-producing bacterium from swine intestinal tract

scientific article published on 5 April 2018

Carbadox has both temporary and lasting effects on the swine gut microbiota.

scientific article

Collateral effects of antibiotics on mammalian gut microbiomes

scientific article

Construction and validation of two metagenomic DNA libraries from Cerrado soil with high clay content.

scientific article

Effect of sole or combined administration of nitrate and 3-nitro-1-propionic acid on fermentation and Salmonella survivability in alfalfa-fed rumen cultures in vitro.

scientific article published on 12 January 2017

Estimating population diversity with CatchAll.

scientific article published on 13 February 2012

Estimation of viral richness from shotgun metagenomes using a frequency count approach

scientific article

Fermentation products as feed additives mitigate some ill-effects of heat stress in pigs.

scientific article published in January 2017

Finding alternatives to antibiotics

scientific article

Function and Phylogeny of Bacterial Butyryl Coenzyme A:Acetate Transferases and Their Diversity in the Proximal Colon of Swine.

scientific article published on 09 September 2016

Intracellular screen to identify metagenomic clones that induce or inhibit a quorum-sensing biosensor

scientific article published in October 2005

Isolation, characterization and strain selection of a Paenibacillus species for use as a probiotic to aid in ruminal methane mitigation, nitrate/nitrite detoxification and food safety

scientific article published on 30 April 2018

Meta-analysis To Define a Core Microbiota in the Swine Gut.

scientific article

Pipeline for amplifying and analyzing amplicons of the V1-V3 region of the 16S rRNA gene

scientific article

Porcine Response to a Multidrug-Resistant Salmonella enterica serovar I 4,[5],12:i:- Outbreak Isolate

scientific article published on 7 February 2018

Practical implications of erythromycin resistance gene diversity on surveillance and monitoring of resistance

scientific article published on 15 January 2018

Profiling the gastrointestinal microbiota in response to Salmonella: low versus high Salmonella shedding in the natural porcine host.

scientific article

Prophylactic Administration of Vector-Encoded Porcine Granulocyte-Colony Stimulating Factor Reduces Salmonella Shedding, Tonsil Colonization, and Microbiota Alterations of the Gastrointestinal Tract in Salmonella-Challenged Swine

scientific article published on 25 August 2016

Psychrotrophic strain of Janthinobacterium lividum from a cold Alaskan soil produces prodigiosin.

scientific article

Resident microbiota of the gypsy moth midgut harbors antibiotic resistance determinants

scientific article

Summer Workshop in Metagenomics: One Week Plus Eight Students Equals Gigabases of Cloned DNA ⬇️

scientific article published on January 1, 2011

Telomerase activity as a potential diagnostic marker for triage of abnormal Pap smears.

scientific article

That's disturbing! An exploration of the bacteriophage biology of change.

scientific article

The In-Feed Antibiotic Carbadox Induces Phage Gene Transcription in the Swine Gut Microbiome.

scientific article

The agricultural antibiotic carbadox induces phage-mediated gene transfer in Salmonella.

scientific article published on 11 February 2014

Treatment, promotion, commotion: antibiotic alternatives in food-producing animals.

scientific article published on March 2013

Virus ecology and disturbances: impact of environmental disruption on the viruses of microorganisms.

scientific article published on 12 December 2014

List of works by Heather K Allen

Altered egos: antibiotic effects on food animal microbiomes

Antibiotic resistance gene discovery in food-producing animals.

Antibiotics in feed induce prophages in swine fecal microbiomes

Bacteria, phages and pigs: the effects of in-feed antibiotics on the microbiome at different gut locations.

Butyrate-producing bacteria, including mucin degraders, from the swine intestinal tract.

Butyricicoccus porcorum sp. nov., a butyrate-producing bacterium from swine intestinal tract

Carbadox has both temporary and lasting effects on the swine gut microbiota.

Collateral effects of antibiotics on mammalian gut microbiomes

Construction and validation of two metagenomic DNA libraries from Cerrado soil with high clay content.

Effect of sole or combined administration of nitrate and 3-nitro-1-propionic acid on fermentation and Salmonella survivability in alfalfa-fed rumen cultures in vitro.

Estimating population diversity with CatchAll.

Estimation of viral richness from shotgun metagenomes using a frequency count approach

Fermentation products as feed additives mitigate some ill-effects of heat stress in pigs.

Finding alternatives to antibiotics

Function and Phylogeny of Bacterial Butyryl Coenzyme A:Acetate Transferases and Their Diversity in the Proximal Colon of Swine.

Intracellular screen to identify metagenomic clones that induce or inhibit a quorum-sensing biosensor

Isolation, characterization and strain selection of a Paenibacillus species for use as a probiotic to aid in ruminal methane mitigation, nitrate/nitrite detoxification and food safety

Meta-analysis To Define a Core Microbiota in the Swine Gut.

Pipeline for amplifying and analyzing amplicons of the V1-V3 region of the 16S rRNA gene

Porcine Response to a Multidrug-Resistant Salmonella enterica serovar I 4,[5],12:i:- Outbreak Isolate

Practical implications of erythromycin resistance gene diversity on surveillance and monitoring of resistance

Profiling the gastrointestinal microbiota in response to Salmonella: low versus high Salmonella shedding in the natural porcine host.

Prophylactic Administration of Vector-Encoded Porcine Granulocyte-Colony Stimulating Factor Reduces Salmonella Shedding, Tonsil Colonization, and Microbiota Alterations of the Gastrointestinal Tract in Salmonella-Challenged Swine

Psychrotrophic strain of Janthinobacterium lividum from a cold Alaskan soil produces prodigiosin.

Resident microbiota of the gypsy moth midgut harbors antibiotic resistance determinants

Summer Workshop in Metagenomics: One Week Plus Eight Students Equals Gigabases of Cloned DNA ⬇️

Telomerase activity as a potential diagnostic marker for triage of abnormal Pap smears.

That's disturbing! An exploration of the bacteriophage biology of change.

The In-Feed Antibiotic Carbadox Induces Phage Gene Transcription in the Swine Gut Microbiome.

The agricultural antibiotic carbadox induces phage-mediated gene transfer in Salmonella.

Treatment, promotion, commotion: antibiotic alternatives in food-producing animals.

Virus ecology and disturbances: impact of environmental disruption on the viruses of microorganisms.