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List of works by Pierre-Yves Dupont

A Core Gene Set Describes the Molecular Basis of Mutualism and Antagonism in Epichloë spp.

scientific article published in March 2015

An outbreak of multiple genotypes of Listeria monocytogenes in New Zealand linked to contaminated ready-to-eat meats-a retrospective analysis using whole-genome sequencing

scientific article published on 21 October 2019

Analysis of simple sequence repeat (SSR) structure and sequence within Epichloë endophyte genomes reveals impacts on gene structure and insights into ancestral hybridization events

scientific article published on 8 September 2017

Chromatin-level regulation of the fragmented dothistromin gene cluster in the forest pathogen Dothistroma septosporum

scientific article published on 14 December 2017

Complex epigenetic regulation of alkaloid biosynthesis and host interaction by heterochromatin protein I in a fungal endophyte-plant symbiosis

scientific article published on 04 February 2019

Computational analysis of the transcriptional regulation of the adenine nucleotide translocator isoform 4 gene and its role in spermatozoid glycolytic metabolism

scientific article

Computational identification of transcriptionally co-regulated genes, validation with the four ANT isoform genes ⬇️

scientific article published on September 15, 2012

Epichloë hybrida, sp. nov., an emerging model system for investigating fungal allopolyploidy.

scientific article

Evolution of polyketide synthesis in a Dothideomycete forest pathogen

scientific article published on 6 July 2017

Evolutionary relics dominate the small number of secondary metabolism genes in the hemibiotrophic fungus Dothistroma septosporum

scientific article published on 27 February 2019

Fungal endophyte infection of ryegrass reprograms host metabolism and alters development

scientific article

Genomic Data Quality Impacts Automated Detection of Lateral Gene Transfer in Fungi

scientific article

Global population genomics of the forest pathogen Dothistroma septosporum reveal chromosome duplications in high dothistromin-producing strains

scientific article published on 01 April 2019

Host Tissue Environment Directs Activities of an Epichloë Endophyte, While It Induces Systemic Hormone and Defense Responses in Its Native Perennial Ryegrass Host

scientific article

HyLiTE: accurate and flexible analysis of gene expression in hybrid and allopolyploid species.

scientific article

Microsatellite marker analysis reveals the complex phylogeographic history of Rhododendron ferrugineum (Ericaceae) in the Pyrenees

scientific article

Reduced Virulence of an Introduced Forest Pathogen over 50 Years

scientific article published on 05 October 2019

Repeat elements organise 3D genome structure and mediate transcription in the filamentous fungus Epichloë festucae

article

Repeat elements organize 3D genome structure and mediate transcription in the filamentous fungus Epichloë festucae

article

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