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List of works by Annegret Kohler

A Comprehensive Analysis of Genes Encoding Small Secreted Proteins Identifies Candidate Effectors inMelampsora larici-populina(Poplar Leaf Rust)

article

A Transcriptomic Atlas of the Ectomycorrhizal Fungus Laccaria bicolor

scientific article published on 20 December 2021

A gene repertoire for nitrogen transporters in Laccaria bicolor

scientific article published on 28 July 2008

A secreted effector protein of Laccaria bicolor is required for symbiosis development

scientific article published on 14 July 2011

Alterations in the phenylpropanoid pathway affect poplar ability for ectomycorrhizal colonisation and susceptibility to root-knot nematodes

scientific article published on 09 July 2020

An ectomycorrhizal fungus alters sensitivity to jasmonate, salicylate, gibberellin, and ethylene in host roots

scientific article published on 05 February 2020

Analysis of expressed sequence tags from the ectomycorrhizal basidiomycetes Laccaria bicolor and Pisolithus microcarpus

article

Benzothiadiazole-induced priming for potentiated responses to pathogen infection, wounding, and infiltration of water into leaves requires the NPR1/NIM1 gene in Arabidopsis

scientific article published in March 2002

Biosynthesis of ferulic acid esters of plant cell wall polysaccharides in endomembranes from parsley cells ⬇️

scientific article published on 01 September 1991

Broad-specificity GH131 β-glucanases are a hallmark of fungi and oomycetes that colonize plants

scientific article published on 21 April 2019

Carbohydrate utilization and metabolism is highly differentiated in Agaricus bisporus

scientific article

Comparative Transcriptomics Analysis of the Symbiotic Germination of <i>D. officinale</i> (Orchidaceae) With Emphasis on Plant Cell Wall Modification and Cell Wall-Degrading Enzymes

scientific article published on 06 May 2022

Comparative genomics and transcriptomics depict ericoid mycorrhizal fungi as versatile saprotrophs and plant mutualists

scientific article published on 7 January 2018

Comparative genomics, proteomics and transcriptomics give new insight into the exoproteome of the basidiomycete Hebeloma cylindrosporum and its involvement in ectomycorrhizal symbiosis.

scientific article

Comparison of the thiol-dependent antioxidant systems in the ectomycorrhizal Laccaria bicolor and the saprotrophic Phanerochaete chrysosporium

scientific article

Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists

scientific article

Desert truffle genomes reveal their reproductive modes and new insights into plant-fungal interaction and ectendomycorrhizal lifestyle

scientific article published on 28 October 2020

Development and validation of an oligonucleotide microarray to characterise ectomycorrhizal fungal communities

scientific article

Development of the Poplar-Laccaria bicolor Ectomycorrhiza Modifies Root Auxin Metabolism, Signaling, and Response

scientific article

Diversity and evolution of ABC proteins in mycorrhiza-forming fungi

scientific article published on 28 December 2015

Draft Genome Sequence of Tuber borchii Vittad., a Whitish Edible Truffle.

scientific article

Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum.

scientific article

Effector MiSSP7 of the mutualistic fungus Laccaria bicolor stabilizes the Populus JAZ6 protein and represses jasmonic acid (JA) responsive genes.

scientific article

Ethylene and jasmonic acid act as negative modulators during mutualistic symbiosis between Laccaria bicolor and Populus roots

scientific article published on 03 January 2014

Expanding genomics of mycorrhizal symbiosis

scientific article

Expansion of signal pathways in the ectomycorrhizal fungus Laccaria bicolor- evolution of nucleotide sequences and expression patterns in families of protein kinases and RAS small GTPases

scientific article

Expression analysis of the impact of culture filtrates from the biocontrol agent, Phlebiopsis gigantea on the conifer pathogen, Heterobasidion annosum s.s. Transcriptome

scientific article published on 28 June 2013

Fatty acid metabolism in the ectomycorrhizal fungus Laccaria bicolor

scientific article published in June 2009

Functional guild classification predicts the enzymatic role of fungi in litter and soil biogeochemistry

scientific article published in 2015

Fungal and plant gene expression in the Tulasnella calospora-Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas

scientific article published on 11 November 2016

Fungal ecological strategies reflected in gene transcription - a case study of two litter decomposers

scientific article published on 08 December 2019

Fungi have three tetraspanin families with distinct functions

scientific article

Gene expression analysis of Populus deltoides roots subjected to copper stress

article

Gene expression profiling of the nitrogen starvation stress response in the mycorrhizal ascomycete Tuber borchii

scientific article published on 15 May 2006

Gene organization of the mating type regions in the ectomycorrhizal fungus Laccaria bicolor reveals distinct evolution between the two mating type loci

scientific article published on 12 June 2008

Genetic determinants of endophytism in the Arabidopsis root mycobiome

scientific article published on 10 December 2021

Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis

scientific article

Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche

scientific article published on 8 October 2012

Genome-Wide Analysis of Corynespora cassiicola Leaf Fall Disease Putative Effectors

scientific article published on 2 March 2018

Genome-wide analysis of cell wall-related genes in Tuber melanosporum

scientific article

Genome-wide identification of NBS resistance genes in Populus trichocarpa

scientific article

Genome-wide inventory of metal homeostasis-related gene products including a functional phytochelatin synthase in the hypogeous mycorrhizal fungus Tuber melanosporum ⬇️

scientific article published on November 19, 2010

Genome‐wide search and functional identification of transcription factors in the mycorrhizal fungus Tuber melanosporum ⬇️

scientific article published on November 8, 2010

Genomic Resources Notes Accepted 1 August 2015 - 31 September 2015.

scientific article published on January 2016

Genomic and transcriptomic analysis of Laccaria bicolor CAZome reveals insights into polysaccharides remodelling during symbiosis establishment

scientific article

Hyphal and cytoskeleton polarization in Tuber melanosporum: a genomic and cellular analysis

scientific article published on 19 December 2010

Identification of genes differentially expressed in extraradical mycelium and ectomycorrhizal roots during Paxillus involutus-Betula pendula ectomycorrhizal symbiosis

scientific article

Identification, evolution and functional characterization of two Zn CDF-family transporters of the ectomycorrhizal fungus Suillus luteus

scientific article published on 30 May 2017

Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen

scientific article published on 28 March 2012

Intra-species genetic variability drives carbon metabolism and symbiotic host interactions in the ectomycorrhizal fungus Pisolithus microcarpus

scientific article published on 13 November 2020

Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits

scientific article published on 12 October 2020

Laser capture microdissection of uredinia formed by Melampsora larici-populina revealed a transcriptional switch between biotrophy and sporulation

scientific article

Laser microdissection and microarray analysis of Tuber melanosporum ectomycorrhizas reveal functional heterogeneity between mantle and Hartig net compartments

scientific article

Living in harmony in the wood underground: ectomycorrhizal genomics

scientific article published on 8 February 2007

Mapping the proteome of poplar and application to the discovery of drought-stress responsive proteins

scientific article

Melampsora larici-populina transcript profiling during germination and timecourse infection of poplar leaves reveals dynamic expression patterns associated with virulence and biotrophy

scientific article published in July 2011

Metagenome sequence of Elaphomyces granulatus from sporocarp tissue reveals Ascomycota ectomycorrhizal fingerprints of genome expansion and a Proteobacteria-rich microbiome

scientific article published on 6 March 2015

Modulation of Plant and Fungal Gene Expression Upon Cd Exposure and Symbiosis in Ericoid Mycorrhizal Vaccinium myrtillus

scientific article published on 09 March 2020

Molecular Changes Concomitant with Vascular System Development in Mature Galls Induced by Root-Knot Nematodes in the Model Tree Host Populus tremula × P. alba

scientific article published on 09 January 2020

Multi-omic analyses of exogenous nutrient bag decomposition by the black morel Morchella importuna reveal sustained carbon acquisition and transferring

scientific article published on 06 August 2019

Multi-omic analyses of extensively decayed reveal expression of diverse array of lignocellulose degrading enzymes

scientific article published on 01 October 2018

Mycorrhizal effector PaMiSSP10b alters polyamine biosynthesis in Eucalyptus root cells and promotes root colonization

scientific article published on 20 June 2020

Mycorrhiza‐induced mycocypins of <i>Laccaria bicolor</i> are potent protease inhibitors with nematotoxic and collembola antifeedant activity

scientific article published in 2022

Oak genome reveals facets of long lifespan

scientific article published on 18 June 2018

Obligate biotrophy features unraveled by the genomic analysis of rust fungi

scientific article

Pezizomycetes genomes reveal the molecular basis of ectomycorrhizal truffle lifestyle

scientific article published on 12 November 2018

Photoreceptors in the dark: A functional white collar-like complex and other putative light-sensing components encoded by the genome of the subterranean fungus Tuber melanosporum

scientific article published on 5 January 2017

Phylogenetic, genomic organization and expression analysis of hydrophobin genes in the ectomycorrhizal basidiomycete Laccaria bicolor

scientific article

Poplar metal tolerance protein 1 confers zinc tolerance and is an oligomeric vacuolar zinc transporter with an essential leucine zipper motif

scientific article published on 20 November 2003

Populus trichocarpa and Populus deltoides exhibit different metabolomic responses to colonization by the symbiotic fungus Laccaria bicolor

scientific article published on 01 June 2014

Populus trichocarpa encodes small, effector-like secreted proteins that are highly induced during mutualistic symbiosis.

scientific article

PtaRHE1, a Populus tremula × Populus alba RING-H2 protein of the ATL family, has a regulatory role in secondary phloem fibre development.

scientific article published on 25 April 2015

Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis

scientific article

RNA-Seq of early-infected poplar leaves by the rust pathogen Melampsora larici-populina uncovers PtSultr3;5, a fungal-induced host sulfate transporter

scientific article

Secretome Analysis from the Ectomycorrhizal Ascomycete Cenococcum geophilum.

scientific article

Secretome of the free-living mycelium from the ectomycorrhizal basidiomycete Laccaria bicolor

scientific article published on 29 November 2011

SlZRT2 Encodes a ZIP Family Zn Transporter With Dual Localization in the Ectomycorrhizal Fungus Suillus luteus

scientific article published on 10 October 2019

Structure and expression profile of the phosphate Pht1 transporter gene family in mycorrhizal Populus trichocarpa

scientific article published on 24 June 2011

Tapping genomics to unravel ectomycorrhizal symbiosis

scientific article

The AINTEGUMENTA LIKE1 homeotic transcription factor PtAIL1 controls the formation of adventitious root primordia in poplar

scientific article published on 17 October 2012

The Hydrophobin-Like OmSSP1 May Be an Effector in the Ericoid Mycorrhizal Symbiosis.

scientific article

The Mutualist Laccaria bicolor Expresses a Core Gene Regulon During the Colonization of Diverse Host Plants and a Variable Regulon to Counteract Host-Specific Defenses

scientific article

The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes

scientific article

The Perigord black truffle responds to cold temperature with an extensive reprogramming of its transcriptional activity

scientific article published on 25 September 2010

The Plant Cell Wall-Decomposing Machinery Underlies the Functional Diversity of Forest Fungi

scientific article

The SlZRT1 Gene Encodes a Plasma Membrane-Located ZIP (Zrt-, Irt-Like Protein) Transporter in the Ectomycorrhizal Fungus Suillus luteus

scientific article published on 28 November 2017

The ectomycorrhizal basidiomycete Hebeloma cylindrosporum undergoes early waves of transcriptional reprogramming prior to symbiotic structures differentiation

scientific article published on 11 January 2017

The ectomycorrhizal basidiomycete Laccaria bicolor releases a secreted β-1,4 endoglucanase that plays a key role in symbiosis development.

scientific article published on 6 April 2018

The ectomycorrhizal fungus Laccaria bicolor stimulates lateral root formation in poplar and Arabidopsis through auxin transport and signaling

article by Judith Felten et al published 23 October 2009 in Plant Physiology

The effect of elevated carbon dioxide on the interaction between Eucalyptus grandis and diverse isolates of Pisolithus sp. is associated with a complex shift in the root transcriptome

scientific article

The genomic tool-kit of the truffle Tuber melanosporum programmed cell death.

scientific article

The mutualism effector MiSSP7 of Laccaria bicolor alters the interactions between the poplar JAZ6 protein and its associated proteins

scientific article published on 23 November 2020

The poplar root transcriptome: analysis of 7000 expressed sequence tags

scientific article

The small secreted effector protein MiSSP7.6 of Laccaria bicolor is required for the establishment of ectomycorrhizal symbiosis

scientific article published on 02 March 2020

The transcriptional landscape of basidiosporogenesis in mature Pisolithus microcarpus basidiocarp

scientific article

Transcript profiling of poplar leaves upon infection with compatible and incompatible strains of the foliar rust Melampsora larici-populina

scientific article

Transcriptome analysis of poplar rust telia reveals overwintering adaptation and tightly coordinated karyogamy and meiosis processes

scientific article

Transcriptome analysis of the Populus trichocarpa-Rhizophagus irregularis Mycorrhizal Symbiosis: Regulation of Plant and Fungal Transportomes under Nitrogen Starvation

scientific article published on 6 April 2017

Transcriptomic profiles of Heterobasidion annosum under abiotic stresses and during saprotrophic growth in bark, sapwood and heartwood.

scientific article published on 28 November 2013

Transcriptomic responses of Phanerochaete chrysosporium to oak acetonic extracts: focus on a new glutathione transferase

scientific article

Unearthing the roots of ectomycorrhizal symbioses

scientific article published on 31 October 2016

iTRAQ and RNA-Seq Analyses Provide New Insights into Regulation Mechanism of Symbiotic Germination of Dendrobium officinale Seeds (Orchidaceae).

scientific article

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