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List of works by Richard Bruskiewich

Biolink Model: A Universal Schema for Knowledge Graphs in Clinical, Biomedical, and Translational Science ⬇️

scientific article

Characterization of statistical features for plant microRNA prediction.

scientific article

Characterizing genetic diversity and creating novel gene pools in rice for trait dissection and gene function discovery

article

Chemical- and irradiation-induced mutants of indica rice IR64 for forward and reverse genetics.

scientific article

Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana

scientific article

Development of a novel data mining tool to find cis-elements in rice gene promoter regions

scientific article (publication date: 27 February 2008)

Evaluating methods for isolating total RNA and predicting the success of sequencing phylogenetically diverse plant transcriptomes

scientific article

Generation Challenge Programme (GCP): standards for crop data

scientific article

Genomewide SNP variation reveals relationships among landraces and modern varieties of rice

scholarly article

Identification of candidate genes for drought stress tolerance in rice by the integration of a genetic (QTL) map with the rice genome physical map

scientific article

International crop information system for germplasm data management

scientific article

Interoperability with Moby 1.0--it's better than sharing your toothbrush!

scientific article

KG-Hub -- Building and Exchanging Biological Knowledge Graphs

preprint published in 2023

KG-Hub—building and exchanging biological knowledge graphs

scientific article published in 2023

Knowledge Beacons: Web services for data harvesting of distributed biomedical knowledge

scientific article published on 23 March 2021

Knowledge.Bio: A Web application for exploring, building and sharing webs of biomedical relationships mined from PubMed

Light-regulated and cell-specific methylation of the maize PEPC promoter ⬇️

scientific article published on December 5, 2011

Linking genotype to phenotype: the International Rice Information System (IRIS).

scientific article

Meeting review: plant bioinformatics at the NSF and NPGI (PAMGX satellite) meetings

scientific article published on January 2002

Multifunctional crop trait ontology for breeders' data: field book, annotation, data discovery and semantic enrichment of the literature

scientific article

Physiological and proteomic responses of rice peduncles to drought stress

scientific article published on June 2011

Revealing sequence variation patterns in rice with machine learning methods

scholarly article by Regina Bohnert et al published 2008 in BMC Bioinformatics

RiceGeneThresher: a web-based application for mining genes underlying QTL in rice genome

scientific article published on 27 September 2008

Sequencing multiple and diverse rice varieties. Connecting whole-genome variation with phenotypes

scientific article published in 2006

The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. The DBCLS BioHackathon Consortium*

scientific article (publication date: 21 August 2010)

The Generation Challenge Programme comparative plant stress-responsive gene catalogue

scientific article

The Implicitome: A Resource for Rationalizing Gene-Disease Associations

scientific article

The International Rice Information System. A platform for meta-analysis of rice crop data

scientific article (publication date: October 2005)

The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genes and diseases across species

The Promoter Signatures in Rice LEA Genes Can Be Used to Build a Co-expressing LEA Gene Network

article

The Rice Annotation Project Database (RAP-DB): 2008 update

scientific article

The generation challenge programme platform: semantic standards and workbench for crop science

scientific article

Transcriptional regulatory network triggered by oxidative signals configures the early response mechanisms of japonica rice to chilling stress

scientific article

Transposable element annotation of the rice genome

scientific article published in January 2004

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