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List of works by Gunter P Wagner

1,2,3 = 2,3,4: a solution to the problem of the homology of the digits in the avian hand

scientific article

A model based criterion for gene expression calls using RNA-seq data.

scientific article

A model of developmental evolution: selection, pleiotropy and compensation.

scientific article published on 03 March 2012

A molecular footprint of limb loss: sequence variation of the autopodial identity gene Hoxa-13.

scientific article published in December 2008

A simple model of co-evolutionary dynamics caused by epistatic selection

scientific article published on 07 September 2007

A stochastic model for the evolution of transcription factor binding site abundance.

scientific article published on 7 March 2007

ACP5 (Uteroferrin): phylogeny of an ancient and conserved gene expressed in the endometrium of mammals

scientific article (publication date: April 2012)

Adaptive changes in the transcription factor HoxA-11 are essential for the evolution of pregnancy in mammals

scientific article (publication date: 30 September 2008)

Adaptive evolution of Hox-gene homeodomains after cluster duplications

scientific article

Aggregation of variables and system decomposition: Applications to fitness landscape analysis

scientific article published in June 2004

An experimental test of the ovulatory homolog model of female orgasm

scientific article published on 30 September 2019

An independent genome duplication inferred from Hox paralogs in the American paddlefish--a representative basal ray-finned fish and important comparative reference

scientific article (publication date: 2012)

Ancient transposable elements transformed the uterine regulatory landscape and transcriptome during the evolution of mammalian pregnancy.

scientific article published on 29 January 2015

Animal evolution: when did the 'Hox system' arise?

scientific article

Are there general laws for digit evolution in squamates? The loss and re-evolution of digits in a clade of fossorial lizards (Brachymeles , Scincinae)

scientific article published on 8 June 2018

Author Correction: Evolution of placental invasion and cancer metastasis are causally linked

scientific article published on 01 February 2020

Bichir HoxA cluster sequence reveals surprising trends in ray-finned fish genomic evolution.

scientific article

Cell-type phylogenetics and the origin of endometrial stromal cells.

scientific article

Character identity mechanisms: a conceptual model for comparative-mechanistic biology

scientific article published on 30 July 2020

Character trees from transcriptome data: Origin and individuation of morphological characters and the so-called "species signal".

scientific article

Coevolution of functionally constrained characters: prerequisites for adaptive versatility

scientific article published on 01 January 1984

Convergent evolution of endometrial prolactin expression in primates, mice, and elephants through the independent recruitment of transposable elements.

scientific article published on 2 August 2011

Co‐option of stress mechanisms in the origin of evolutionary novelties

scientific article published in 2022

Decidualization of Human Endometrial Stromal Fibroblasts is a Multiphasic Process Involving Distinct Transcriptional Programs

scientific article published on 11 October 2018

Did egg-laying boas break Dollo's law? Phylogenetic evidence for reversal to oviparity in sand boas (Eryx: Boidae).

scientific article

Directionality of epistasis in a murine intercross population

scientific article

Divergence of Conserved Non-Coding Sequences: Rate Estimates and Relative Rate Tests

article

Duplication of modules facilitates the evolution of functional specialization.

scientific article published in January 2000

Editorial: A new series of Vignettes on the History of Evolutionary Developmental Biology ⬇️

scientific article published on October 15, 2003

Entorhinal lesions result in shrinkage of the outer molecular layer of rat dentate gyrus leading subsequently to an apparent increase of glutamate decarboxylase and cytochrome oxidase activities ⬇️

scientific article published on September 9, 1983

Epistasis in polygenic traits and the evolution of genetic architecture under stabilizing selection

scientific article published on 02 May 2003

Evidence against tetrapod-wide digit identities and for a limited frame shift in bird wings

scientific article published on 19 July 2019

Evidence for four Hox clusters in the killifish Fundulus heteroclitus (teleostei)

scientific article published on 01 April 1996

Evidence for independent Hox gene duplications in the hagfish lineage: a PCR-based gene inventory of Eptatretus stoutii

article

Evidence for independent evolution of functional progesterone withdrawal in primates and guinea pigs.

scientific article published on January 2013

Evolution of a derived protein-protein interaction between HoxA11 and Foxo1a in mammals caused by changes in intramolecular regulation

scientific article

Evolution of adaptive phenotypic variation patterns by direct selection for evolvability

scientific article published on 24 November 2010

Evolution of digit identity in the three-toed Italian skink Chalcides chalcides: a new case of digit identity frame shift.

scientific article

Evolution of dominance in metabolic pathways.

scientific article published on November 2004

Evolution of functional specialization and division of labor

scientific article published on 24 January 2012

Evolution of genetic architecture under directional selection.

scientific article published in August 2006

Evolution of placental invasion and cancer metastasis are causally linked

scientific article published on 25 November 2019

Evolutionary genetics: the nature of hidden genetic variation unveiled.

scientific article published on December 2003

Evolutionary innovations overcome ancestral constraints: a re-examination of character evolution in male sepsid flies (Diptera: Sepsidae).

scientific article published in January 2002

Evolutionary modification of regenerative capability in vertebrates: a comparative study on teleost pectoral fin regeneration

scientific article published on 01 January 1992

Evolutionary novelties

scientific article published on 01 January 2010

Feedback selection and the evolution of modifiers.

scientific article published in January 1981

Final theory in biology

scientific article published on 01 June 1993

Finding the frame shift: digit loss, developmental variability, and the origin of the avian hand.

scientific article

Frame-shifts of digit identity in bird evolution and Cyclopamine-treated wings.

scientific article

Francis (Frank) Hugh Ruddle (1929–2013) ⬇️

scientific article published on May 6, 2013

Gene phylogenies and protein–protein interactions: possible artifacts resulting from shared protein interaction partners

article

Genetic measurement of theory of epistatic effects.

scientific article published in January 1998

Genetics: The inner life of proteins.

scientific article

Genomic correlates of relationship QTL involved in fore- versus hind limb divergence in mice

scientific article published on January 2013

Heterochronic differences of Hoxa-11 expression in Xenopus fore- and hind limb development: evidence for lower limb identity of the anuran ankle bones.

scientific article published in June 1998

Identity of the avian wing digits: problems resolved and unsolved.

scientific article published on 15 March 2011

Immunohistological study of the endometrial stromal fibroblasts in the opossum, Monodelphis domestica: evidence for homology with eutherian stromal fibroblasts

scientific article published on 16 April 2014

Is Hsp90 a regulator of evolvability?

scientific article published on 01 August 1999

Malignant cancer and invasive placentation: A case for positive pleiotropy between endometrial and malignancy phenotypes

scientific article

Measurement and meaning in biology.

scientific article published on March 2011

Modeling amino acid substitution patterns in orthologous and paralogous genes.

scientific article published on 26 July 2006

Modeling genetic architecture: a multilinear theory of gene interaction

scientific article published on 01 February 2001

Modeling the evolution of genetic architecture: A continuum of alleles model with pairwise AxA epistasis

scientific article published on 01 March 2000

Molecular and developmental evolution editorial.

scientific article published in April 1999

Molecular evolution of HoxA13 and the multiple origins of limbless morphologies in amphibians and reptiles

scientific article

Molecular evolution of duplicated ray finned fish HoxA clusters: increased synonymous substitution rate and asymmetrical co-divergence of coding and non-coding sequences.

scientific article published on May 2005

Molecular evolution of evolutionary novelties: the vagina and uterus of therian mammals.

scientific article published in November 2005

Molecular evolution of the HoxA cluster in the three major gnathostome lineages

scientific article

Multiple chromosomal rearrangements structured the ancestral vertebrate Hox-bearing protochromosomes

scientific article

Mutational robustness can facilitate adaptation

scientific article

Nuclear β-catenin localization supports homology of feathers, avian scutate scales, and alligator scales in early development.

scientific article published on May 2015

Of chicken wings and frog legs: a smorgasbord of evolutionary variation in mechanisms of tetrapod limb development.

scientific article

On the definition and measurement of pleiotropy.

scientific article

On the nature of thumbs.

scientific article published on 04 March 2008

PCR-survey of Hox-genes of the zebrafish: new sequence information and evolutionary implications

scientific article published on 01 February 1996

Paul Kammerer's midwife toads: about the reliability of experiments and our ability to make sense of them.

scientific article published in November 2009

Phylogenetic reconstruction of vertebrate Hox cluster duplications ⬇️

scientific article published on August 1, 1997

Pioneering paradigms and magnificent manifestos--Leigh Van Valen's priceless contributions to evolutionary biology

scientific article published on 22 February 2011

Pleiotropic scaling of gene effects and the 'cost of complexity'.

scientific article published in March 2008

Population Dependent Fourier Decomposition of Fitness Landscapes over Recombination Spaces: Evolvability of Complex Characters

scientific article published on 01 May 2000

Protein structural modularity and robustness are associated with evolvability.

scientific article

Proteotype coevolution and quantitative diversity across 11 mammalian species

scientific article published in 2022

Quasi-independence, homology and the unity of type: a topological theory of characters.

scientific article published in February 2003

Regeneration in Salaria pavo (Blenniidae, Teleostei). Histogenesis of the regenerating pectoral fin suggests different mechanisms for morphogenesis and structural maintenance

scientific article published on 01 July 1992

Regulatory evolution through divergence of a phosphoswitch in the transcription factor CEBPB.

scientific article published on 13 November 2011

Reply to Quintana et al.: Behavior is an unlikely mediator of fluoxetine effects on ovulation in rabbits

scientific article published on 03 December 2019

Repressor domain and nuclear localization signal of the murine Hoxa-11 protein are located in the homeodomain: no evidence for role of poly alanine stretches in transcriptional repression.

scientific article published in September 2005

Resurrecting the role of transcription factor change in developmental evolution.

scientific article published on 28 June 2008

Revisiting a classic example of transcription factor functional equivalence: are Eyeless and Pax6 functionally equivalent or divergent?

scientific article published on 17 September 2010

Self-stabilization of neuronal networks. I. The compensation algorithm for synaptogenesis.

scientific article published in January 1986

Self-stabilization of neuronal networks. II. Stability conditions for synaptogenesis.

scientific article

Simon-Ando decomposability and fitness landscapes

scientific article published in September 2004

Small lesions in the primary visual cortex of rats cause a specific reorganization of associational connections.

scientific article published in January 1985

Stress-Induced Evolutionary Innovation: A Mechanism for the Origin of Cell Types

scientific article published on 01 April 2019

Tangential organization of the infragranular fiber plexus in rat cerebral cortex.

scientific article

Ten years of genetics and genomics: what have we achieved and where are we heading?

scientific article

The "fish-specific" Hox cluster duplication is coincident with the origin of teleosts.

scientific article published on 14 September 2005

The Changing Face of Evolutionary Thinking.

scientific article

The Shark HoxN Cluster Is Homologous to the Human HoxD Cluster

scientific article published on 01 February 2004

The developmental evolution of avian digit homology: an update.

scientific article

The evolution of HoxD-11 expression in the bird wing: insights from Alligator mississippiensis

scientific article

The evolution of colony-level development in the Siphonophora (Cnidaria:Hydrozoa).

scientific article

The evolution of empathy and devo-evo-What is the connection?

scientific article published on 01 March 2018

The evolution of phenotypic correlations and "developmental memory".

scientific article published on February 2014

The evolutionary dynamics of evolvability in a gene network model

article

The hierarchical basis of serial homology and evolutionary novelty

scientific article published in 2022

The logical structure of irreversible systems transformations: a theorem concerning Dollo's law and chaotic movement.

scientific article published in June 1982

The mammalian decidual cell evolved from a cellular stress response

The measurement theory of fitness.

scientific article published on 26 November 2009

The origin of platelets enabled the evolution of eutherian placentation

scientific article published on 10 July 2019

The pleiotropic structure of the genotype-phenotype map: the evolvability of complex organisms.

scientific article published on March 2011

The population genetic theory of hidden variation and genetic robustness.

scientific article

The road to modularity.

scientific article

The statistical geometry of transcriptome divergence in cell-type evolution and cancer.

scientific article published on 14 January 2015

The test distribution of modularity statistics: a correction and clarification

scientific article published on July 2001

The tetrapod limb: a hypothesis on its origin.

scientific article

The topology of the possible: formal spaces underlying patterns of evolutionary change.

scientific article

Tinkering with transcription factor proteins: the role of transcription factor adaptation in developmental evolution.

scientific article published on January 2007

Tissue-specific splicing of disordered segments that embed binding motifs rewires protein interaction networks

scientific article published on June 2012

Transcriptomic analysis of avian digits reveals conserved and derived digit identities in birds.

scientific article published on 4 September 2011

Transformation of a transposon into a derived prolactin promoter with function during human pregnancy ⬇️

scientific article (publication date: 10 July 2012)

Transposable element recruitments in the mammalian placenta: impacts and mechanisms.

scientific article published on 28 June 2012

Transposon-mediated rewiring of gene regulatory networks contributed to the evolution of pregnancy in mammals.

scientific article published on 25 September 2011

Two rules for the detection and quantification of epistasis and other interaction effects

scientific article published in January 2015

Using 3D-digital photogrammetry to examine scaling of the body axis in burrowing skinks

scientific article published on 20 August 2020

Uterine gene expression in the live-bearing lizard, Chalcides ocellatus, reveals convergence of squamate reptile and mammalian pregnancy mechanisms

scientific article published on 14 February 2012

Visualizing vertebrates: new methods in functional morphology.

scientific article published in June 2010

What does it take to evolve behaviorally complex organisms?

scientific article

What is "homology thinking" and what is it for?

scientific article published on 21 October 2015

What is the promise of developmental evolution? III. The crucible of developmental evolution.

scientific article published in December 2003

What is the promise of developmental evolution? Part II: A causal explanation of evolutionary innovations may be impossible ⬇️

scientific article published on December 15, 2001

What is the scientific impact of MDE?

scientific article published on 01 October 2002

What was the ancestral function of decidual stromal cells? A model for the evolution of eutherian pregnancy.

scientific article published on 23 February 2016

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