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List of works by Sri Harsha Ramarathinam

A Systems Approach to Understand Antigen Presentation and the Immune Response.

scientific article published in January 2016

A class of γδ T cell receptors recognize the underside of the antigen-presenting molecule MR1

scientific article published on 01 December 2019

A comprehensive analysis of constitutive naturally processed and presented HLA-C*04:01 (Cw4)-specific peptides.

scientific article published on 7 January 2014

A modular BAM complex in the outer membrane of the alpha-proteobacterium Caulobacter crescentus.

scientific article

An open-source computational and data resource to analyze digital maps of immunopeptidomes

scientific article

Can alpha- and beta-alanine containing peptides be distinguished based on the CID spectra of their protonated ions?

scientific article published on 12 September 2008

Discovery of an archetypal protein transport system in bacterial outer membranes.

scientific article

Employing proteomics in the study of antigen presentation: an update

scientific article published on 13 August 2018

HIVed, a knowledgebase for differentially expressed human genes and proteins during HIV infection, replication and latency

scientific article

HLA Class II Specificity Assessed by High-Density Peptide Microarray Interactions

scientific article published on 01 June 2020

Identification of Native and Post-Translationally Modified HLA-B*57:01-Restricted HIV Envelope Derived Epitopes Using Immunoproteomics

scientific article published on 13 February 2018

Immunopeptidomic analysis reveals that deamidated HLA-bound peptides arise predominantly from deglycosylated precursors

scientific article published on 01 May 2020

Improved peptide-MHC class II interaction prediction through integration of eluted ligand and peptide affinity data

scientific article published on 10 June 2019

MHC-I peptides get out of the groove and enable a novel mechanism of HIV-1 escape.

scientific article published on 20 February 2017

Mass spectrometry-based identification of MHC-bound peptides for immunopeptidomics

scientific article published on 15 May 2019

Phosphorylated self-peptides alter human leukocyte antigen class I-restricted antigen presentation and generate tumor-specific epitopes

scientific article

Prevention of Cytotoxic T Cell Escape Using a Heteroclitic Subdominant Viral T Cell Determinant

scientific article

Rapid microscale in-gel processing and digestion of proteins using surface acoustic waves

scientific article

Resourcing, annotating, and analysing synthetic peptides of SARS-CoV-2 for immunopeptidomics and other immunological studies

scientific article published on 14 April 2021

Response to Comment on "A subset of HLA-I peptides are not genomically templated: Evidence for cis- and trans-spliced peptide ligands"

scientific article published on 01 August 2019

Secreted HLA recapitulates the immunopeptidome and allows in-depth coverage of HLA A*02:01 ligands

scientific article published on 17 March 2012

Spliced Peptides and Cytokine-Driven Changes in the Immunopeptidome of Melanoma

scientific article published on 16 September 2020

Stable isotope shifted matrices enable the use of low mass ion precursor scanning for targeted metabolite identification

scientific article published on 17 January 2011

The differentiation state of the Schwann cell progenitor drives phenotypic variation between two contagious cancers

scientific article published on 15 November 2021

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