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List of works by Vera Pancaldi

A Boolean gene regulatory model of heterosis and speciation

scientific article

A Gene Regulatory Network Simulation of Heterosis

article

Abstract LB-155: Epigenetic profiling of chemotherapy sensitivity

AnGeLi: A Tool for the Analysis of Gene Lists from Fission Yeast

scientific article

Automatic identification of informative regions with epigenomic changes associated to hematopoiesis

Automatic identification of informative regions with epigenomic changes associated to hematopoiesis.

scientific article published on September 2017

Biological noise to get a sense of direction: an analogy between chemotaxis and stress response

scientific article published on 13 March 2014

ChiCMaxima: a robust and simple pipeline for detection and visualization of chromatin looping in Capture Hi-C

scientific article published on 22 May 2019

Chromatin Regulators as a Guide for Cancer Treatment Choice

scientific article published on 16 May 2016

Community-wide hackathons to identify central themes in single-cell multi-omics

publication published in 2021

Comparative analysis of neutrophil and monocyte epigenomes

Epigenetic and Transcriptional Variability Shape Phenotypic Plasticity

scientific article published on 18 December 2017

Genetic Drivers of Epigenetic and Transcriptional Variation in Human Immune Cells

scientific article

Genome-wide analysis of differential transcriptional and epigenetic variability across human immune cell types

scientific article published on 26 January 2017

Hierarchical coarse-graining transform

scientific article published on 18 March 2009

Higher gene expression variability in the more aggressive subtype of chronic lymphocytic leukemia

scientific article

In silico characterization and prediction of global protein-mRNA interactions in yeast

scientific article

Insights on TAM Formation from a Boolean Model of Macrophage Polarization Based on In Vitro Studies

scientific article published on 07 December 2020

Integrating epigenomic data and 3D genomic structure with a new measure of chromatin assortativity

scientific article

Interpreting molecular similarity between patients as a determinant of disease comorbidity relationships

scientific article published on 05 June 2020

Meta-analysis of genome regulation and expression variability across hundreds of environmental and genetic perturbations in fission yeast

scientific article published on 15 December 2009

Molecular Inverse Comorbidity between Alzheimer's Disease and Lung Cancer: New Insights from Matrix Factorization

scientific article published on 26 June 2019

Permeability up-scaling using Haar Wavelets

Predicting the fission yeast protein interaction network

scientific article

Preface to the special issue “Complexity in the Oil Industry 2007”

STAG2 loss-of-function affects short-range genomic contacts and modulates the basal-luminal transcriptional program of bladder cancer cells

scientific article published on 01 November 2021

Stress induces remodelling of yeast interaction and co-expression networks

scientific article published on 7 March 2013

Systematic screen for mutants resistant to TORC1 inhibition in fission yeast reveals genes involved in cellular ageing and growth.

scientific article

Topology of functional networks predicts physical binding of proteins.

scientific article published on 19 June 2012

Transcriptomic metaanalyses of autistic brains reveals shared gene expression and biological pathway abnormalities with cancer

article

Unveiling new disease, pathway, and gene associations via multi-scale neural network

scientific article published on 06 April 2020

Upscaling of the Saturation Equation

Wavelet-based upscaling of advection equations

Whole-genome fingerprint of the DNA methylome during human B cell differentiation

scientific article

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