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List of works by Aleksandar David Kostić

A Microbiome Foundation for the Study of Crohn's Disease

scientific article published on March 2017

A perfect storm: Genetics and anticommensal antibodies shore up type 1 diabetes

scientific article published on 01 February 2019

A systematic machine learning and data type comparison yields metagenomic predictors of infant age, sex, breastfeeding, antibiotic usage, country of origin, and delivery type

scientific article published on 11 May 2020

Aether: leveraging linear programming for optimal cloud computing in genomics

scientific article published on 8 December 2017

An integrative view of microbiome-host interactions in inflammatory bowel diseases

scientific article published on May 2015

Assessment of the cPAS-based BGISEQ-500 platform for metagenomic sequencing

scientific article published on 23 December 2017

Association of Dietary Patterns With Risk of Colorectal Cancer Subtypes Classified by Fusobacterium nucleatum in Tumor Tissue

scientific article published on 26 January 2017

Bacteroides-Derived Sphingolipids Are Critical for Maintaining Intestinal Homeostasis and Symbiosis

scientific article published on 01 May 2019

Circulating short and medium chain fatty acids are associated with normoalbuminuria in type 1 diabetes of long duration

scientific article published on 21 April 2021

CoproID predicts the source of coprolites and paleofeces using microbiome composition and host DNA content

scientific article published on 17 April 2020

Diet, Genetics, and the Gut Microbiome Drive Dynamic Changes in Plasma Metabolites.

scientific article published in March 2018

Dysbiosis, inflammation, and response to treatment: a longitudinal study of pediatric subjects with newly diagnosed inflammatory bowel disease

scientific article

Emerging Concepts and Technologies for the Discovery of Microorganisms Involved in Human Disease

scientific article published on 5 December 2016

Fusobacterium nucleatum and T Cells in Colorectal Carcinoma

scientific article

Fusobacterium nucleatum in Colorectal Cancer Relates to Immune Response Differentially by Tumor Microsatellite Instability Status

scientific article published on 18 September 2018

Fusobacterium nucleatum in Colorectal Carcinoma Tissue According to Tumor Location

scientific article

Fusobacterium nucleatum in colorectal carcinoma tissue and patient prognosis

scientific article published on 26 August 2015

Fusobacterium nucleatum potentiates intestinal tumorigenesis and modulates the tumor-immune microenvironment

scientific article

Gene-level metagenomic architectures across diseases yield high-resolution microbiome diagnostic indicators

scientific article published on 18 May 2021

Genomic analysis identifies association of Fusobacterium with colorectal carcinoma

scientific article

Gut Microbiota: Small Molecules Modulate Host Cellular Functions

scientific article published in April 2017

Human genome-wide RNAi screen identifies an essential role for inositol pyrophosphates in Type-I interferon response

scientific article (publication date: February 2014)

Intestinal virome changes precede autoimmunity in type I diabetes-susceptible children

scientific article published on 10 July 2017

Keystone microbiome meeting 2012: a mountain top experience.

scientific article

Meta-omics analysis of elite athletes identifies a performance-enhancing microbe that functions via lactate metabolism

scientific article published on 24 June 2019

Microbes and inflammation in colorectal cancer

scientific article

Predictive metabolomic profiling of microbial communities using amplicon or metagenomic sequences

scientific article published on 17 July 2019

Prognostically relevant gene signatures of high-grade serous ovarian carcinoma

scientific article

Reconstruction of ancient microbial genomes from the human gut

scientific article published on 12 May 2021

The Crohn's disease polymorphism, ATG16L1 T300A, alters the gut microbiota and enhances the local Th1/Th17 response

January 2019 scholarly article in eLife

The Landscape of Genetic Content in the Gut and Oral Human Microbiome

scientific article published on 01 August 2019

The TPR-containing domain within Est1 homologs exhibits species-specific roles in telomerase interaction and telomere length homeostasis

scientific journal article

The dynamics of the human infant gut microbiome in development and in progression toward type 1 diabetes

scientific article published on 5 February 2015

The genomic landscape of Mexican Indigenous populations brings insights into the peopling of the Americas

scientific article published on 12 October 2021

The predictive power of the microbiome exceeds that of genome-wide association studies in the discrimination of complex human disease

scientific article published on 2 January 2020

The treatment-naive microbiome in new-onset Crohn's disease

scientific article

Understanding the growing epidemic of type 2 diabetes in the Hispanic population living in the United States

scientific article published on 04 December 2018

Using Cartesian Doubt To Build a Sequencing-Based View of Microbiology

publication published on 12 October 2021

Variation in Microbiome LPS Immunogenicity Contributes to Autoimmunity in Humans

scientific article

Variation in Microbiome LPS Immunogenicity Contributes to Autoimmunity in Humans

scientific article published on 01 June 2016

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