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List of works by Toma Tebaldi

A Computing System for Discovering Causal Relationships Among Human Genes to Improve Drug Repositioning

scientific article published in 2021

A highly efficient and faithful MDS patient-derived xenotransplantation model for pre-clinical studies

scientific article published in Nature Communications

AURA 2: Empowering discovery of post-transcriptional networks

scientific article (publication date: 2014)

AURA: Atlas of UTR Regulatory Activity

scientific article

Active Ribosome Profiling with RiboLace

article

Cancer cell metabolic plasticity allows resistance to NAMPT inhibition but invariably induces dependence on LDHA.

scientific article published on 8 March 2018

Cooperative interactions between p53 and NFκB enhance cell plasticity.

scientific article

Downregulation of HuR as a new mechanism of doxorubicin resistance in breast cancer cells.

scientific article published on 21 March 2012

Global translation variations in host cells upon attack of lytic and sublytic Staphylococcus aureus α-haemolysin.

scientific article published on 14 September 2015

High-Spatial-Resolution Multi-Omics Sequencing via Deterministic Barcoding in Tissue

scientific article published on 09 November 2020

HuD Is a Neural Translation Enhancer Acting on mTORC1-Responsive Genes and Counteracted by the Y3 Small Non-coding RNA

article

Hydrogen peroxide is a neuronal alarmin that triggers specific RNAs, local translation of Annexin A2, and cytoskeletal remodeling in Schwann cells.

scientific article

Hypomorphic mutation of the mouse Huntington's disease gene orthologue

article

Identification and dynamic changes of RNAs isolated from RALY-containing ribonucleoprotein complexes

scientific article

Increased frequency of minimal homozygous deletions is associated with poor prognosis in primary malignant melanoma patients

scientific article published on 24 February 2014

Integration of heterogeneous expression data sets extends the role of the retinol pathway in diabetes and insulin resistance

scientific article published on 28 September 2009

In Vivo Translatome Profiling in Spinal Muscular Atrophy Reveals a Role for SMN Protein in Ribosome Biology

scientific article published in October 2017

Low iron promotes megakaryocytic commitment of megakaryocytic-erythroid progenitors in humans and mice

scientific article published on 01 October 2019

Natural SINEUP RNAs in Autism Spectrum Disorders: <i>RAB11B-AS1</i> Dysregulation in a Neuronal <i>CHD8</i> Suppression Model Leads to RAB11B Protein Increase

publication published on 22 November 2021

PTRcombiner: mining combinatorial regulation of gene expression from post-transcriptional interaction maps

scientific article

Publisher Correction: Regulation of cellular sterol homeostasis by the oxygen responsive noncoding RNA lincNORS

scientific article published on 06 November 2020

RNAcommender: genome-wide recommendation of RNA-protein interactions.

scientific article published on 8 August 2016

Regulation of cellular sterol homeostasis by the oxygen responsive noncoding RNA lincNORS

scientific article published on 21 September 2020

RiboAbacus: a model trained on polyribosome images predicts ribosome density and translational efficiency from mammalian transcriptomes

scientific article

SMN-primed ribosomes modulate the translation of transcripts related to spinal muscular atrophy

scientific article published on 21 September 2020

SRSF2 mutations drive oncogenesis by activating a global program of aberrant alternative splicing in hematopoietic cells

scientific article published on 01 June 2018

The Typhoid Toxin Promotes Host Survival and the Establishment of a Persistent Asymptomatic Infection

scientific article

The Unexpected Tuners: Are LncRNAs Regulating Host Translation during Infections?

scientific article published on 3 November 2017

The altered transcriptome of pediatric myelodysplastic syndrome revealed by RNA sequencing

scientific article published on 12 October 2020

The hnRNP RALY regulates transcription and cell proliferation by modulating the expression of specific factors including the proliferation marker E2F1.

scientific article published on 27 September 2017

Three distinct ribosome assemblies modulated by translation are the building blocks of polysomes

scientific article

Transcriptome-wide quantification of double-stranded RNAs in live mouse tissues by dsRIP-Seq

scientific article published on 18 March 2021

Translational downregulation of HSP90 expression by iron chelators in neuroblastoma cells.

scientific article

TrkA is amplified in malignant melanoma patients and induces an anti-proliferative response in cell lines.

scientific article published on 24 October 2015

Whole-genome cartography of p53 response elements ranked on transactivation potential.

scientific article published on 17 June 2015

Widespread association of the Argonaute protein AGO2 with meiotic chromatin suggests a distinct nuclear function in mammalian male reproduction

scientific article published in 2022

Widespread uncoupling between transcriptome and translatome variations after a stimulus in mammalian cells.

scientific article

eIF6 coordinates insulin sensitivity and lipid metabolism by coupling translation to transcription

scientific journal article

p53-directed translational control can shape and expand the universe of p53 target genes.

scientific article

riboWaltz: Optimization of ribosome P-site positioning in ribosome profiling data

scientific article published on 13 August 2018

tRanslatome: an R/Bioconductor package to portray translational control

scientific article published on 12 November 2013

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