List of works - Paul Macklin

A New Ghost Cell/Level Set Method for Moving Boundary Problems: Application to Tumor Growth

scientific article

A novel, patient-specific mathematical pathology approach for assessment of surgical volume: application to ductal carcinoma in situ of the breast.

scientific article published in January 2011

A persistent invasive phenotype in post-hypoxic tumor cells is revealed by fate mapping and computational modeling

scientific article published on 04 August 2021

Agent-Based Modeling of Cancer Stem Cell Driven Solid Tumor Growth

scientific article published on 05 April 2016

An agent-based model for elasto-plastic mechanical interactions between cells, basement membrane and extracellular matrix.

scientific article published in February 2013

BioFVM: an efficient, parallelized diffusive transport solver for 3-D biological simulations.

scientific article published on 12 December 2015

Correlating nuclear morphometric patterns with estrogen receptor status in breast cancer pathologic specimens

scientific article published on 04 September 2018

Foundations for Open Scholarship Strategy Development

Improved patient-specific calibration for agent-based cancer modeling

scientific article published on 22 October 2012

Integrative physical oncology

scientific article published on 18 August 2011

Introduction: Open Source Cell Simulators

scientific article published in 2017

Learning-accelerated discovery of immune-tumour interactions

scientific article published on 07 June 2019

Maraviroc inhibits SARS-CoV-2 multiplication and s-protein mediated cell fusion in cell culture

scientific article published on 13 August 2020

Multiscale modelling and nonlinear simulation of vascular tumour growth.

scientific article

Nonlinear simulation of the effect of microenvironment on tumor growth.

scientific article published on 12 December 2006

PhysiBoSS: a multi-scale agent based modelling framework integrating physical dimension and cell signalling

PhysiCell: An open source physics-based cell simulator for 3-D multicellular systems

scientific article published on 23 February 2018

Rapid community-driven development of a SARS-CoV-2 tissue simulator ⬇️

scientific article published on 06 April 2020

Supporting <i>Computational Apprenticeship</i> Through Educational and Software Infrastructure: A Case Study in a Mathematical Oncology Research Lab

scientific article published on 27 January 2021

The 2019 mathematical oncology roadmap

scientific article published on 19 June 2019

The Cancer Microbiome: Distinguishing Direct and Indirect Effects Requires a Systemic View

scientific article published on 07 February 2020

The Need for Integrative Computational Oncology: An Illustrated Example through MMP-Mediated Tissue Degradation.

scientific article published on 26 July 2013

xml2jupyter: Mapping parameters between XML and Jupyter widgets

scientific article published on 01 July 2019

List of works by Paul Macklin