List of works by Judith B Zaugg

A genomic model of condition-specific nucleosome behavior explains transcriptional activity in yeast.

scientific article

Backmasking in the yeast genome: encoding overlapping information for protein-coding and RNA degradation

scientific article

Bacterial adaptation through distributed sensing of metabolic fluxes

scientific article

CDK7/12/13 inhibition targets an oscillating leukemia stem cell network and synergizes with venetoclax in acute myeloid leukemia

scientific article published on 07 March 2022

Cell-specific proteome analyses of human bone marrow reveal molecular features of age-dependent functional decline

scientific article published in Nature Communications

Data-driven hypothesis weighting increases detection power in genome-scale multiple testing

scientific article

Extensive variation in chromatin states across humans

scientific article

Gene loops enhance transcriptional directionality

scientific article published on 27 September 2012

Genetic Control of Chromatin States in Humans Involves Local and Distal Chromosomal Interactions

scientific article

Hepatic leukemia factor is a novel leukemic stem cell regulator in DNMT3A, NPM1, and FLT3-ITD triple-mutated AML

scientific article published on 10 May 2019

Landscape of cohesin-mediated chromatin loops in the human genome

scientific article published on 29 July 2020

Lysine 4 of histone H3.3 is required for embryonic stem cell differentiation, histone enrichment at regulatory regions and transcription accuracy

scientific article published on 05 March 2020

Mechanistic insights into transcription factor cooperativity and its impact on protein-phenotype interactions

scientific article published on 08 January 2020

Plasmodium falciparum malaria drives epigenetic reprogramming of human monocytes toward a regulatory phenotype

scientific article published on 21 October 2020

Plasmodium falciparum malaria drives epigenetic reprogramming of human monocytes toward a regulatory phenotype

scientific article published in 2021

Predictive features of gene expression variation reveal mechanistic link with differential expression

scientific article published on 01 August 2020

Remodeling of active endothelial enhancers is associated with aberrant gene-regulatory networks in pulmonary arterial hypertension

scientific article published on 03 April 2020

Role of histone modifications and early termination in pervasive transcription and antisense-mediated gene silencing in yeast.

scientific article published on 04 February 2014

SNPhood: investigate, quantify and visualise the epigenomic neighbourhood of SNPs using NGS data

scientific article

Structure determination of a flexible cyclic peptide based on NMR and MD simulation 3J-coupling.

scientific article published in March 2010

TET2 binding to enhancers facilitates transcription factor recruitment in hematopoietic cells

scientific article published on 22 February 2019

Transcription factors: Bridge between cell signaling and gene regulation

scientific article published in 2021