List of works - Koen Verhoeven

A Latex Metabolite Benefits Plant Fitness under Root Herbivore Attack

scientific article

Adaptive plasticity and epigenetic variation in response to warming in an Alpine plant

scientific article

Changes in genomic methylation patterns during the formation of triploid asexual dandelion lineages.

scientific article published on 14 December 2009

Chytrid epidemics may increase genetic diversity of a diatom spring-bloom.

scientific article published on 09 May 2013

Consistent errors in first strand cDNA due to random hexamer mispriming

scientific article

Correction: Plants Know Where It Hurts: Root and Shoot Jasmonic Acid Induction Elicit Differential Responses in Brassica oleracea.

scientific article

Costs and benefits of admixture between foreign genotypes and local populations in the field.

scientific article published on 5 March 2018

Cross-species interference of gene expression

scientific article published in Nature Communications

Developmental stress does not induce genome‐wide <scp>DNA</scp> methylation changes in wild great tit (<i>Parus major</i>) nestlings

scientific article published in 2023

Ecological fits, mis-fits and lotteries involving insect herbivores on the invasive plant, Bunias orientalis

article

Ecological plant epigenetics: Evidence from model and non-model species, and the way forward

scientific article published on 12 October 2017

Effects of Multi-Generational Stress Exposure and Offspring Environment on the Expression and Persistence of Transgenerational Effects in Arabidopsis thaliana

scientific article

Effects of admixture in native and invasive populations of Lythrum salicaria ⬇️

scientific article published on 21 March 2018

Epigenetic population differentiation in field- and common garden-grown Scabiosa columbaria plants.

scientific article published on 25 February 2018

Epigenetic variation in asexually reproducing organisms.

scientific article published on 13 December 2013

Evidence from pyrosequencing indicates that natural variation in animal personality is associated with DRD4 DNA methylation

scientific article published on 17 December 2015

Evolutionary Significance of Epigenetic Variation

article

Evolutionary responses to climate change in a range expanding plant

scientific article

Evolutionary signals of selection on cognition from the great tit genome and methylome.

scientific article published on 25 January 2016

Experimental evidence of rapid heritable adaptation in the absence of initial standing genetic variation

scientific article published on 15 October 2021

Gene and transposable element methylation in great tit (Parus major) brain and blood

scientific article

Geographic parthenogenesis and plant-enemy interactions in the common dandelion.

scientific article

Heritable gene expression differences between apomictic clone members in Taraxacum officinale: Insights into early stages of evolutionary divergence in asexual plants.

scientific article

Increased transgenerational epigenetic variation, but not predictable epigenetic variants, after environmental exposure in two apomictic dandelion lineages.

scientific article published on 19 February 2018

Intergenerational environmental effects: functional signals in offspring transcriptomes and metabolomes after parental jasmonic acid treatment in apomictic dandelion.

scientific article published on 16 October 2017

LAESI mass spectrometry imaging as a tool to differentiate the root metabolome of native and range-expanding plant species

Local adaptation and the consequences of being dislocated from coevolved enemies.

scientific article

Metabolomic profiling reveals shifts in defenses of an invasive plant

scientific article published in 2023

Natural epigenetic variation contributes to heritable flowering divergence in a widespread asexual dandelion lineage

scientific article published on 28 November 2015

Phenotypic selection and regulation of reproduction in different environments in wild barley.

scientific article published in September 2004

Plant invaders and their novel natural enemies: who is naïve?

scientific article published in February 2009

Plant-soil feedback: experimental approaches, statistical analyses and ecological interpretations

article

Population admixture, biological invasions and the balance between local adaptation and inbreeding depression. ⬇️

scientific article published on 4 August 2010

Recent and dynamic transposable elements contribute to genomic divergence under asexuality.

scientific article

Reduced-representation bisulfite sequencing finds novel epigenome-wide response to oil pollution in the foundation plant Spartina alterniflora

article

Small RNAs reflect grandparental environments in apomictic dandelion

scientific article

Small RNAs reflect grandparental environments in apomictic dandelion

Stress-induced DNA methylation changes and their heritability in asexual dandelions.

scientific article published on 14 December 2009

The epigenetic footprint of poleward range-expanding plants in apomictic dandelions.

scientific article published on 23 July 2015

Transgenerational Effects of Stress Exposure on Offspring Phenotypes in Apomictic Dandelion ⬇️

scientific article published on June 18, 2012

Understanding natural epigenetic variation.

scientific article

Using mating designs to uncover QTL and the genetic architecture of complex traits

scientific article published on 01 February 2006

Variation in DNA Methylation in Avian Nestlings Is Largely Determined by Genetic Effects

scientific article published in 2023

epiGBS: reference-free reduced representation bisulfite sequencing.

scientific article published on 8 February 2016

List of works by Koen Verhoeven

A Latex Metabolite Benefits Plant Fitness under Root Herbivore Attack

Adaptive plasticity and epigenetic variation in response to warming in an Alpine plant

Changes in genomic methylation patterns during the formation of triploid asexual dandelion lineages.

Chytrid epidemics may increase genetic diversity of a diatom spring-bloom.

Consistent errors in first strand cDNA due to random hexamer mispriming

Correction: Plants Know Where It Hurts: Root and Shoot Jasmonic Acid Induction Elicit Differential Responses in Brassica oleracea.

Costs and benefits of admixture between foreign genotypes and local populations in the field.

Cross-species interference of gene expression

Developmental stress does not induce genome‐wide <scp>DNA</scp> methylation changes in wild great tit (<i>Parus major</i>) nestlings

Ecological fits, mis-fits and lotteries involving insect herbivores on the invasive plant, Bunias orientalis

Ecological plant epigenetics: Evidence from model and non-model species, and the way forward

Effects of Multi-Generational Stress Exposure and Offspring Environment on the Expression and Persistence of Transgenerational Effects in Arabidopsis thaliana

Effects of admixture in native and invasive populations of Lythrum salicaria ⬇️

Epigenetic population differentiation in field- and common garden-grown Scabiosa columbaria plants.

Epigenetic variation in asexually reproducing organisms.

Evidence from pyrosequencing indicates that natural variation in animal personality is associated with DRD4 DNA methylation

Evolutionary Significance of Epigenetic Variation

Evolutionary responses to climate change in a range expanding plant

Evolutionary signals of selection on cognition from the great tit genome and methylome.

Experimental evidence of rapid heritable adaptation in the absence of initial standing genetic variation

Gene and transposable element methylation in great tit (Parus major) brain and blood

Geographic parthenogenesis and plant-enemy interactions in the common dandelion.

Heritable gene expression differences between apomictic clone members in Taraxacum officinale: Insights into early stages of evolutionary divergence in asexual plants.

Increased transgenerational epigenetic variation, but not predictable epigenetic variants, after environmental exposure in two apomictic dandelion lineages.

Intergenerational environmental effects: functional signals in offspring transcriptomes and metabolomes after parental jasmonic acid treatment in apomictic dandelion.

LAESI mass spectrometry imaging as a tool to differentiate the root metabolome of native and range-expanding plant species

Local adaptation and the consequences of being dislocated from coevolved enemies.

Metabolomic profiling reveals shifts in defenses of an invasive plant

Natural epigenetic variation contributes to heritable flowering divergence in a widespread asexual dandelion lineage

Phenotypic selection and regulation of reproduction in different environments in wild barley.

Plant invaders and their novel natural enemies: who is naïve?

Plant-soil feedback: experimental approaches, statistical analyses and ecological interpretations

Population admixture, biological invasions and the balance between local adaptation and inbreeding depression. ⬇️

Recent and dynamic transposable elements contribute to genomic divergence under asexuality.

Reduced-representation bisulfite sequencing finds novel epigenome-wide response to oil pollution in the foundation plant Spartina alterniflora

Small RNAs reflect grandparental environments in apomictic dandelion

Small RNAs reflect grandparental environments in apomictic dandelion

Stress-induced DNA methylation changes and their heritability in asexual dandelions.

The epigenetic footprint of poleward range-expanding plants in apomictic dandelions.

Transgenerational Effects of Stress Exposure on Offspring Phenotypes in Apomictic Dandelion ⬇️

Understanding natural epigenetic variation.

Using mating designs to uncover QTL and the genetic architecture of complex traits

Variation in DNA Methylation in Avian Nestlings Is Largely Determined by Genetic Effects

epiGBS: reference-free reduced representation bisulfite sequencing.