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List of works by Denes Turei

Adipocyte-secreted BMP8b mediates adrenergic-induced remodeling of the neuro-vascular network in adipose tissue

scientific article published in Nature Communications

Autophagy Regulatory Network - a systems-level bioinformatics resource for studying the mechanism and regulation of autophagy.

scientific article published in January 2015

Benchmark and integration of resources for the estimation of human transcription factor activities

Benchmark and integration of resources for the estimation of human transcription factor activities

scientific article published on 24 July 2019

Bringing data from curated pathway resources to Cytoscape with OmniPath

scientific article published on 30 December 2019

COVID-19 Disease Map, a computational knowledge repository of SARS-CoV-2 virus-host interaction mechanisms

COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms ⬇️

journal article from 'Molecular Systems Biology' published in 2021

Complex regulation of autophagy in cancer - integrated approaches to discover the networks that hold a double-edged sword.

scientific article published on 28 June 2013

Democratising Knowledge Representation with BioCypher

scientific article published on 27 December 2022

Integrated intra‐ and intercellular signaling knowledge for multicellular omics analysis

scientific article published on 22 March 2021

Integration of Structured Biological Data Sources using Biological Expression Language

BioRxiv scholarly article describing Bio2BEL

Mapping the epithelial-immune cell interactome upon infection in the gut and the upper airways

scientific article published on 02 May 2022

NRF2-ome: an integrated web resource to discover protein interaction and regulatory networks of NRF2.

scientific article published on 17 April 2013

Network pharmacology modeling identifies synergistic Aurora B and ZAK interaction in triple-negative breast cancer

scientific article published on 08 July 2019

OmniPath: guidelines and gateway for literature-curated signaling pathway resources.

scientific article

SignaFish: A Zebrafish-Specific Signaling Pathway Resource.

scientific article

SignaLink 2 - a signaling pathway resource with multi-layered regulatory networks

scientific article

Targets of drugs are generally, and targets of drugs having side effects are specifically good spreaders of human interactome perturbations

scientific article published on 11 May 2015

The Minimum Information about a Molecular Interaction Causal Statement (MI2CAST)

scientific article published on 30 June 2020

The NRF2-related interactome and regulome contain multifunctional proteins and fine-tuned autoregulatory loops.

scientific article published on 26 May 2012

The orchestra of lipid-transfer proteins at the crossroads between metabolism and signaling

scientific article

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