List of works by Stefan Janssen

A communal catalogue reveals Earth's multiscale microbial diversity

scientific article published in November 2017

A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium meliloti

scientific article published in 2010

A gut bacterial amyloid promotes α-synuclein aggregation and motor impairment in mice

scientific article published on 11 February 2020

Ambivalent covariance models

scientific article

American Gut: an Open Platform for Citizen Science Microbiome Research

article

Assessing taxonomic metagenome profilers with OPAL

Assessing taxonomic metagenome profilers with OPAL

scientific article published on 04 March 2019

Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

scientific article published on 01 September 2019

Bellman's GAP

article

Bellman's GAP--a language and compiler for dynamic programming in sequence analysis

scientific article published on 25 January 2013

Creating a 3D microbial and chemical snapshot of a human habitat.

scientific article published on 27 February 2018

Critical Assessment of Metagenome Interpretation-a benchmark of metagenomics software.

scientific article published on 2 October 2017

EMPress Enables Tree-Guided, Interactive, and Exploratory Analyses of Multi-omic Data Sets

scientific article published on 15 March 2021

Faster computation of exact RNA shape probabilities

scientific article

Gut Microbiota Regulate Motor Deficits and Neuroinflammation in a Model of Parkinson's Disease

scientific article

Infectious stimuli promote malignant B-cell acute lymphoblastic leukemia in the absence of AID

scientific article published on 05 December 2019

KatharoSeq Enables High-Throughput Microbiome Analysis from Low-Biomass Samples.

scientific article published on 13 March 2018

Lost in folding space? Comparing four variants of the thermodynamic model for RNA secondary structure prediction

scientific article

Microbiome analyses of blood and tissues suggest cancer diagnostic approach

scientific article published on 11 March 2020

Phylogenetic Placement of Exact Amplicon Sequences Improves Associations with Clinical Information.

scientific article published on 17 April 2018

Phylogenomics of 10,575 genomes reveals evolutionary proximity between domains Bacteria and Archaea

scientific article published on 02 December 2019

Prediction of RNA Secondary Structure Including Kissing Hairpin Motifs

article

QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

Qiita: rapid, web-enabled microbiome meta-analysis

scientific article published on 01 October 2018

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

scientific article published on 01 August 2019

Shape based indexing for faster search of RNA family databases

scientific article

The RNA shapes studio

scientific article

The impact of skin care products on skin chemistry and microbiome dynamics

scientific article published on 12 June 2019

Vitamin D metabolites and the gut microbiome in older men

scientific article published on 26 November 2020

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