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List of works by Surya Saha

A quick guide for student-driven community genome annotation

scientific article published on 03 April 2019

An annotated genetic map of loblolly pine based on microsatellite and cDNA markers.

scientific article

An automated, high-throughput sequence read classification pipeline for preliminary genome characterization.

scientific article published on 10 August 2007

Asian citrus psyllid stylet morphology and applicability to the model for inter-instar stylet replacement in the potato psyllid

scientific article published on 14 August 2018

Bound to Succeed: transcription factor binding-site prediction and its contribution to understanding virulence and environmental adaptation in bacterial plant pathogens.

scientific article published on October 2013

Breedbase: a digital ecosystem for modern plant breeding

scientific article published in 2022

Characterization of the Asian Citrus Psyllid Transcriptome.

scientific article published on January 2014

Combining 'omics and microscopy to visualize interactions between the Asian citrus psyllid vector and the Huanglongbing pathogen Candidatus Liberibacter asiaticus in the insect gut.

scientific article

Comprehensive repeatome annotation reveals strong potential impact of repetitive elements on tomato ripening

scientific article

Critical Assessment of Metagenome Interpretation-a benchmark of metagenomics software.

scientific article published on 2 October 2017

Development on Citrus medica infected with 'Candidatus Liberibacter asiaticus' has sex-specific and -nonspecific impacts on adult Diaphorina citri and its endosymbionts

scientific article published on 06 October 2020

Empirical comparison of ab initio repeat finding programs

scientific article

Genome of Solanum pimpinellifolium provides insights into structural variants during tomato breeding

scientific article published on 16 November 2020

Genome-Assisted Development of a Diagnostic Protocol for Distinguishing High Virulence Pseudomonas syringae pv. tomato Strains

scientific article published on 01 April 2015

Graph pangenome captures missing heritability and empowers tomato breeding

scientific article published on 08 June 2022

Improved annotation of the insect vector of citrus greening disease: biocuration by a diverse genomics community

scientific article published in January 2017

Improved annotation of the insect vector of citrus greening disease: biocuration by a diverse genomics community

scientific article published on 01 January 2019

NCBI's Virus Discovery Codeathon: Building "FIVE" -The Federated Index of Viral Experiments API Index

scientific article published on 10 December 2020

NCBI's Virus Discovery Hackathon: Engaging Research Communities to Identify Cloud Infrastructure Requirements

scientific article published on 16 September 2019

Survey of endosymbionts in the Diaphorina citri metagenome and assembly of a Wolbachia wDi draft genome

scientific article

Targeted genome reconstruction strategy for endosymbionts in eukaryotic genomes

The Sol Genomics Network (SGN)--from genotype to phenotype to breeding

scientific article

Traits of selected Clostridium strains for syngas fermentation to ethanol

scientific article published on 2 September 2015

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