Search filters

List of works by Ioannis Tsamardinos

'Reduced' HUNT model outperforms NLST and NELSON study criteria in predicting lung cancer in the Danish screening trial

scientific article published on 11 November 2019

A Unified Approach for Sparse Dynamical System Inference from Temporal Measurements

scientific article published on 01 September 2019

A Validated Clinical Risk Prediction Model for Lung Cancer in Smokers of All Ages and Exposure Types: A HUNT Study.

scientific article published on 30 March 2018

A comparative evaluation of data-merging and meta-analysis methods for reconstructing gene-gene interactions

scientific article

A comparison of Bayesian network learning algorithms from continuous data.

scientific article

A comprehensive evaluation of multicategory classification methods for microarray gene expression cancer diagnosis.

scientific article

A data driven approach reveals disease similarity on a molecular level

scientific article published on 25 October 2019

A greedy feature selection algorithm for Big Data of high dimensionality

scientific article published on 07 August 2018

A novel algorithm for scalable and accurate Bayesian network learning

scientific article published in January 2004

A systematic review of predictive risk models for diabetes complications based on large scale clinical studies ⬇️

scientific article published on December 27, 2012

A vision and strategy for the virtual physiological human in 2010 and beyond.

scientific article

A vision and strategy for the virtual physiological human: 2012 update.

scientific article published on April 2013

Accurate Blood-Based Diagnostic Biosignatures for Alzheimer's Disease via Automated Machine Learning

scientific article published on 18 September 2020

Applicability of an Automated Model and Parameter Selection in the Prediction of Screening-Level PTSD in Danish Soldiers Following Deployment: Development Study of Transferable Predictive Models Using Automated Machine Learning

scientific article published on 22 July 2020

BioDataome: a collection of uniformly preprocessed and automatically annotated datasets for data-driven biology

scientific article published on 01 January 2018

Biomarker signature identification in "omics" data with multi-class outcome

scientific article

Bootstrapping the out-of-sample predictions for efficient and accurate cross-validation

Challenges in the Multivariate Analysis of Mass Cytometry Data: The Effect of Randomization

scientific article published on 06 November 2019

Challenges in the analysis of mass-throughput data: a technical commentary from the statistical machine learning perspective.

scientific article

Circulating cell-free DNA in breast cancer: size profiling, levels, and methylation patterns lead to prognostic and predictive classifiers

scientific article published on 14 January 2019

Combining evidence from four immune cell types identifies DNA methylation patterns that implicate functionally distinct pathways during Multiple Sclerosis progression

scientific article

Constraint-based causal discovery with mixed data

scientific article published on 02 February 2018

Development and validation of risk assessment models for diabetes-related complications based on the DCCT/EDIC data

scientific article published on 6 March 2015

Don't use a cannon to kill the ... miRNA mosquito

scientific article published on 10 March 2014

Erratum to: A comparative evaluation of data-merging and meta-analysis methods for reconstructing gene-gene interactions

scientific article published on 27 July 2016

Excerpts from the 1st international NTNU symposium on current and future clinical biomarkers of cancer: innovation and implementation, June 16th and 17th 2016, Trondheim, Norway

scientific article published on 19 October 2016

Factors influencing the statistical power of complex data analysis protocols for molecular signature development from microarray data

scientific article

Feature selection for high-dimensional temporal data.

scientific article published on 23 January 2018

Feature selection with the R package MXM

scientific article published on 20 September 2018

Feedforward regulation of Myc coordinates lineage-specific with housekeeping gene expression during B cell progenitor cell differentiation

article

GATA-1 genome-wide occupancy associates with distinct epigenetic profiles in mouse fetal liver erythropoiesis

scientific article published on 21 March 2013

GEMS: a system for automated cancer diagnosis and biomarker discovery from microarray gene expression data

scientific article

Hidden treasures in "ancient" microarrays: gene-expression portrays biology and potential resistance pathways of major lung cancer subtypes and normal tissue

scientific article published on 29 September 2014

Learning Pathway Dynamics from Single-Cell Proteomic Data: A Comparative Study

scientific article published on 25 February 2020

Learning biologically-interpretable latent representations for gene expression data

scientific article published in 2022

MatureBayes: a probabilistic algorithm for identifying the mature miRNA within novel precursors

scientific article

MatureP: prediction of secreted proteins with exclusive information from their mature regions.

scientific article published on 12 June 2017

Methods for multi-category cancer diagnosis from gene expression data: a comprehensive evaluation to inform decision support system development.

scientific article

MiRduplexSVM: A High-Performing MiRNA-Duplex Prediction and Evaluation Methodology

scientific article published on 11 May 2015

Non-parametric combination analysis of multiple data types enables detection of novel regulatory mechanisms in T cells of multiple sclerosis patients

scientific article published on 19 August 2019

Predicting Causal Relationships from Biological Data: Applying Automated Causal Discovery on Mass Cytometry Data of Human Immune Cells

scientific article published on 5 October 2017

Realization of a service for the long-term risk assessment of diabetes-related complications

scientific article published on 25 March 2015

SCENERY: a web application for (causal) network reconstruction from cytometry data.

scientific article

STATegra, a comprehensive multi-omics dataset of B-cell differentiation in mouse

scientific article published on 31 October 2019

Structural Basis of the Subcellular Topology Landscape of Escherichia coli

scientific article published on 24 July 2019

Structure-based variable selection for survival data

scientific article

T-ReCS: stable selection of dynamically formed groups of features with application to prediction of clinical outcomes

scientific article

Text categorization models for high-quality article retrieval in internal medicine

scientific article

The max-min hill-climbing Bayesian network structure learning algorithm

The morphological classification of heartbeats as dominant and non-dominant in ECG signals

scientific article published on 22 March 2010

The γ-OMP algorithm for feature selection with application to gene expression data

scientific article published on 09 October 2020

Toward Automatic Risk Assessment to Support Suicide Prevention

scientific article published on 26 November 2018

Translating vitamin D transcriptomics to clinical evidence: Analysis of data in asthma and chronic obstructive pulmonary disease, followed by clinical data meta-analysis

scientific article published on 24 October 2019

Using Constraint Optimization for Conflict Resolution and Detail Control in Activity Recognition

omicsNPC: Applying the Non-Parametric Combination Methodology to the Integrative Analysis of Heterogeneous Omics Data

scientific article

Paulina is supported by:

About Paulina

Help