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List of works by Francisco Fernandez-Lima

A Study of Ion-Neutral Collision Cross Section Values for Low Charge States of Peptides, Proteins, and Peptide/Protein Complexes.

scientific article

A new copper containing MALDI matrix that yields high abundances of [peptide + Cu]+ ions

scientific article

A novel approach to collision-induced dissociation (CID) for ion mobility-mass spectrometry experiments

scientific article

A theoretical and experimental study of positive and neutral LiF clusters produced by fast ion impact on a polycrystalline LiF target.

scientific article published in March 2009

AT-hook peptides bind the major and minor groove of AT-rich DNA duplexes

scientific article published on 01 March 2022

Alkali Halide Nanotubes: Structure and Stability.

scientific article published on March 2012

Alkali halide clusters produced by fast ion impact

scientific article published on February 2012

Amino acid influence on copper binding to peptides: cysteine versus arginine

scientific article

Analysis of Chemotherapeutic Drug Delivery at the Single Cell Level Using 3D-MSI-TOF-SIMS.

scientific article published on 31 August 2016

Analysis of Fluorescent Proteins with a Nanoparticle Probe ⬇️

scientific article published on February 2, 2012

Analysis of Photoirradiated Water Accommodated Fractions of Crude Oils Using Tandem TIMS and FT-ICR MS.

scientific article published on May 2017

Analysis of isomeric opioids in urine using LC-TIMS-TOF MS.

scientific article published on 19 February 2018

Analysis of native biological surfaces using a 100 kV massive gold cluster source.

scientific article

Bidirectional Ion Emission from Massive Gold Cluster Impacts on Nanometric Carbon Foils ⬇️

scientific article published on March 12, 2012

Biochemical Basis of E. coli Topoisomerase I Relaxation Activity Reduction by Nonenzymatic Lysine Acetylation.

scientific article

Changes in lipid distribution in E. coli strains in response to norfloxacin

scientific article

Characteristics of positive and negative secondary ions emitted from [Formula: see text] and [Formula: see text] impacts.

scientific article published on January 2013

Characterization of (NH3)(n=1-6)NH+ clusters produced by 252Cf fragments impact onto a NH3 condensed target

scientific article published on 08 August 2007

Characterization of Intramolecular Interactions of Cytochrome c Using Hydrogen-Deuterium Exchange-Trapped Ion Mobility Spectrometry-Mass Spectrometry and Molecular Dynamics.

scientific article published on 25 July 2017

Characterization of individual nano-objects with nanoprojectile-SIMS

scientific article

Characterization of the Photophysical, Thermodynamic, and Structural Properties of the Terbium(III)-DREAM Complex.

scientific article

Chemical Analysis of Water-accommodated Fractions of Crude Oil Spills Using TIMS-FT-ICR MS.

scientific article published on 3 March 2017

Coupling trapped ion mobility spectrometry to mass spectrometry: trapped ion mobility spectrometry-time-of-flight mass spectrometry versus trapped ion mobility spectrometry-Fourier transform ion cyclotron resonance mass spectrometry

scientific article published on 01 August 2018

Differentiating Parallel and Antiparallel DNA Duplexes in the Gas Phase Using Trapped Ion Mobility Spectrometry

scientific article published on 27 June 2018

Direct observation of differences of carotenoid polyene chain cis/trans isomers resulting from structural topology.

scientific article published on 28 January 2014

Discovery and targeted monitoring of polychlorinated biphenyl metabolites in blood plasma using LC-TIMS-TOF MS

scientific article published on 21 November 2017

Effective Liquid Chromatography-Trapped Ion Mobility Spectrometry-Mass Spectrometry Separation of Isomeric Lipid Species

scientific article published on 04 April 2019

Effects of gamma radiation on phase behaviour and critical micelle concentration of Triton X-100 aqueous solutions.

scientific article

Evidence of Cis/Trans-Isomerization at Pro7/Pro16 in the Lasso Peptide Microcin J25

scientific article published on 04 March 2019

Experimental and theoretical studies of (CsI)n Cs+ cluster ions produced by 355 nm laser desorption ionization.

scientific article

Exploring the Conformational Space of Growth-Hormone-Releasing Hormone Analogues Using Dopant Assisted Trapped Ion Mobility Spectrometry-Mass Spectrometry

scientific article published on 12 July 2019

Fast Screening of Polycyclic Aromatic Hydrocarbons using Trapped Ion Mobility Spectrometry - Mass Spectrometry

scientific article

Fast and Effective Ion Mobility-Mass Spectrometry Separation of d-Amino-Acid-Containing Peptides

scientific article

Flavin adenine dinucleotide structural motifs: from solution to gas phase

scientific article

Gas-phase separation using a trapped ion mobility spectrometer.

scientific article published on September 2011

Identification of Lasso Peptide Topologies Using Native Nanoelectrospray Ionization-Trapped Ion Mobility Spectrometry-Mass Spectrometry

scientific article published on 03 April 2018

Increasing Analytical Separation and Duty Cycle with Nonlinear Analytical Mobility Scan Functions in TIMS-FT-ICR MS.

scientific article published on 27 January 2018

Increasing Polyaromatic Hydrocarbon (PAH) Molecular Coverage during Fossil Oil Analysis by Combining Gas Chromatography and Atmospheric-Pressure Laser Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry (FT-ICR MS).

scientific article

Insights from ion mobility-mass spectrometry, infrared spectroscopy, and molecular dynamics simulations on nicotinamide adenine dinucleotide structural dynamics: NAD+vs. NADH.

scientific article

Ion dynamics in a trapped ion mobility spectrometer

scientific article

Ion mobility-mass spectrometer interface for collisional activation of mobility separated ions

scientific article

Isomer Separation of Polybrominated Diphenyl Ether Metabolites using nanoESI-TIMS-MS

scientific article

Isomerization kinetics of AT hook decapeptide solution structures.

scientific article published on 08 January 2014

JH biosynthesis and hemolymph titers in adult male Aedes aegypti mosquitoes

scientific article published on 8 March 2018

Juvenile hormone controls ovarian development in female Anopheles albimanus mosquitoes

scientific article published in Scientific Reports

Kinetic intermediates of holo- and apo-myoglobin studied using HDX-TIMS-MS and molecular dynamic simulations

scientific article

Laser induced formation of CsI ion clusters analyzed by delayed extraction time-of-flight mass spectrometry.

scientific article

Linear and Differential Ion Mobility Separations of Middle-Down Proteoforms.

scientific article published on 23 January 2018

Lipid specific molecular ion emission as a function of the primary ion characteristics in TOF-SIMS.

scientific article published on 24 August 2016

Mapping chemotherapeutic drug distribution in cancer cell spheroids using 2D-TOF-SIMS and LESA-TIMS-MS

scientific article published on 23 September 2020

Measuring the Integrity of Gas-Phase Conformers of Sodiated 25-Hydroxyvitamin D3 by Drift Tube, Traveling Wave, Trapped, and High-Field Asymmetric Ion Mobility

scientific article published on 08 March 2019

Metal ions induced secondary structure rearrangements: mechanically interlocked lasso vs. unthreaded branched-cyclic topoisomers

scientific article published on 01 May 2018

Microheterogeneity of Topoisomerase IA/IB and Their DNA-Bound States

scientific article published on 18 February 2019

Molecular level characterization of DOM along a freshwater-to-estuarine coastal gradient in the Florida Everglades

scientific article published in 2022

Multimodal, in Situ Imaging of Ex Vivo Human Skin Reveals Decrease of Cholesterol Sulfate in the Neoepithelium during Acute Wound Healing

scientific article published on 17 December 2019

Note: Integration of trapped ion mobility spectrometry with mass spectrometry.

scientific article published on December 2011

Novel detection of post-translational modifications in human monocyte-derived dendritic cells after chronic alcohol exposure: Role of inflammation regulator H4K12ac

scientific article published on 11 September 2017

On the Surface Mapping using Individual Cluster Impacts

scientific article published on February 2012

Oversampling Selective Accumulation Trapped Ion Mobility Spectrometry Coupled to FT-ICR MS: Fundamentals and Applications.

scientific article published on 24 June 2016

Peptide Sequence Influence on the Conformational Dynamics and DNA binding of the Intrinsically Disordered AT-Hook 3 Peptide

scientific article published on 17 July 2018

Petroleum Crude Oil Characterization by IMS-MS and FTICR MS

scientific article published on 01 December 2009

Photon emission from massive projectile impacts on solids ⬇️

scientific article published on January 1, 2011

Photon, Electron, and Secondary Ion Emission from Single C60 keV Impacts ⬇️

scientific article published on December 16, 2010

Secondary ion mass spectrometry imaging of Dictyostelium discoideum aggregation streams

scientific article published on 9 June 2014

Simultaneous detection and localization of secondary ions and electrons from single large cluster impacts

scientific article

Single-stranded DNA structural diversity: TAGGGT from monomers to dimers to tetramer formation

scientific article published on 18 February 2019

Structural Heterogeneity of Human Histone H2A.1.

scientific article published on 11 May 2021

Structural Motif Descriptors as a Way To Elucidate the Agonistic or Antagonistic Activity of Growth Hormone-Releasing Hormone Peptide Analogues

scientific article published on 06 July 2018

Structures of the kinetically trapped i-motif DNA intermediates.

scientific article published on September 2016

Surface characterization of biological nanodomains using NP-ToF-SIMS.

scientific article published on January 2013

Targeted high-resolution ion mobility separation coupled to ultrahigh-resolution mass spectrometry of endocrine disruptors in complex mixtures

scientific article (publication date: 21 April 2015)

The Dimerization State of the Mammalian High Mobility Group Protein AT-Hook 2 (HMGA2)

scientific article

The effects of solution additives and gas-phase modifiers on the molecular environment and conformational space of common heme proteins

scientific article published on 01 March 2019

Theoretical and experimental analysis of ammonia ionic clusters produced by 252Cf fragment impact on an NH3 ice target

scientific article published on 01 August 2006

Theoretical predictor for candidate structure assignment from IMS data of biomolecule-related conformational space.

scientific article

Towards Discovery and Targeted Peptide Biomarker Detection Using nanoESI-TIMS-TOF MS.

scientific article published on 9 September 2017

Towards the Analysis of High Molecular Weight Proteins and Protein complexes using TIMS-MS.

scientific article published on 7 June 2016

Towards unsupervised polyaromatic hydrocarbons structural assignment from SA-TIMS-FTMS data

scientific article

UV laser-induced desorption mechanism analyzed through two-layer alkali halide samples.

scientific article

Understanding the structural complexity of dissolved organic matter: isomeric diversity

scientific article published on 01 August 2019

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