List of works - Hideo Matsumura

A CIN-like TCP transcription factor (LsTCP4) having retrotransposon insertion associates with a shift from Salinas type to Empire type in crisphead lettuce (Lactuca sativa L.).

scientific article published on 01 February 2020

A Novel MAPKK Involved in Cell Death and Defense Signaling

scientific article published in September 2007

A cytochrome P450, OsDSS1, is involved in growth and drought stress responses in rice (Oryza sativa L.).

scientific article published on 24 March 2015

A high-throughput screen of cell-death-inducing factors in Nicotiana benthamiana identifies a novel MAPKK that mediates INF1-induced cell death signaling and non-host resistance to Pseudomonas cichorii

article by Yoshihiro Takahashi et al published 22 February 2007 in The Plant Journal

A multifaceted genomics approach allows the isolation of the rice Pia-blast resistance gene consisting of two adjacent NBS-LRR protein genes

scientific article published on 7 March 2011

Association genetics reveals three novel avirulence genes from the rice blast fungal pathogen Magnaporthe oryzae

scientific article published on 19 May 2009

Functional genomics in a non-model crop: transcriptomics or proteomics?

scientific article

Gene expression analysis of plant host-pathogen interactions by SuperSAGE

scientific article

Genome sequencing of the staple food crop white Guinea yam enables the development of a molecular marker for sex determination

scientific article published on 19 September 2017

Genome sequencing reveals agronomically important loci in rice using MutMap

scientific article published on 22 January 2012

High-throughput SuperSAGE for digital gene expression analysis of multiple samples using next generation sequencing

scientific article (publication date: 6 August 2010)

High-throughput in planta expression screening identifies a class II ethylene-responsive element binding factor-like protein that regulates plant cell death and non-host resistance

scientific article published in August 2005

Large-scale gene disruption in Magnaporthe oryzae identifies MC69, a secreted protein required for infection by monocot and dicot fungal pathogens

scientific article

Long-read bitter gourd (Momordica charantia) genome and the genomic architecture of nonclassic domestication ⬇️

scientific article published on 27 May 2020

Mapping of the gynoecy in bitter gourd (Momordica charantia) using RAD-seq analysis

scientific article

Molecular characterization of the CRa gene conferring clubroot resistance in Brassica rapa

scientific article published on 04 October 2012

MutMap accelerates breeding of a salt-tolerant rice cultivar

scientific article

MutMap+: genetic mapping and mutant identification without crossing in rice

scientific article

MutMap-Gap: whole-genome resequencing of mutant F2 progeny bulk combined with de novo assembly of gap regions identifies the rice blast resistance gene Pii.

scientific article published on 24 June 2013

OsHKT1;5 mediates Na+ exclusion in the vasculature to protect leaf blades and reproductive tissues from salt toxicity in rice

scientific article published on 10 May 2017

Regulatory mechanisms of ROI generation are affected by rice spl mutations.

scientific article

Reply to Renner: Meticulous investigation, not sequencing effort, leads to robust conclusion

scientific article published on 29 September 2020

Rice alcohol dehydrogenase 1 promotes survival and has a major impact on carbohydrate metabolism in the embryo and endosperm when seeds are germinated in partially oxygenated water

scientific article published on 14 January 2014

SuperSAGE as an analytical tool for host and viral gene expression.

scientific article published on January 2015

SuperSAGE combined with PCR walking allows global gene expression profiling of banana (Musa acuminata), a non-model organism

scientific article

Technical advance: transcript profiling in rice (Oryza sativa L.) seedlings using serial analysis of gene expression (SAGE)

scientific article published on 01 December 1999

The cell death factor, cell wall elicitor of rice blast fungus (Magnaporthe grisea) causes metabolic alterations including GABA shunt in rice cultured cells

scientific article published in November 2008

The gene expression landscape of thermogenic skunk cabbage suggests critical roles for mitochondrial and vacuolar metabolic pathways in the regulation of thermogenesis

scientific article

Unraveling the roles of sphingolipids in plant innate immunity.

scientific article published on June 2009

List of works by Hideo Matsumura

A CIN-like TCP transcription factor (LsTCP4) having retrotransposon insertion associates with a shift from Salinas type to Empire type in crisphead lettuce (Lactuca sativa L.).

A Novel MAPKK Involved in Cell Death and Defense Signaling

A cytochrome P450, OsDSS1, is involved in growth and drought stress responses in rice (Oryza sativa L.).

A high-throughput screen of cell-death-inducing factors in Nicotiana benthamiana identifies a novel MAPKK that mediates INF1-induced cell death signaling and non-host resistance to Pseudomonas cichorii

A multifaceted genomics approach allows the isolation of the rice Pia-blast resistance gene consisting of two adjacent NBS-LRR protein genes

Association genetics reveals three novel avirulence genes from the rice blast fungal pathogen Magnaporthe oryzae

Functional genomics in a non-model crop: transcriptomics or proteomics?

Gene expression analysis of plant host-pathogen interactions by SuperSAGE

Genome sequencing of the staple food crop white Guinea yam enables the development of a molecular marker for sex determination

Genome sequencing reveals agronomically important loci in rice using MutMap

High-throughput SuperSAGE for digital gene expression analysis of multiple samples using next generation sequencing

High-throughput in planta expression screening identifies a class II ethylene-responsive element binding factor-like protein that regulates plant cell death and non-host resistance

Large-scale gene disruption in Magnaporthe oryzae identifies MC69, a secreted protein required for infection by monocot and dicot fungal pathogens

Long-read bitter gourd (Momordica charantia) genome and the genomic architecture of nonclassic domestication ⬇️

Mapping of the gynoecy in bitter gourd (Momordica charantia) using RAD-seq analysis

Molecular characterization of the CRa gene conferring clubroot resistance in Brassica rapa

MutMap accelerates breeding of a salt-tolerant rice cultivar

MutMap+: genetic mapping and mutant identification without crossing in rice

MutMap-Gap: whole-genome resequencing of mutant F2 progeny bulk combined with de novo assembly of gap regions identifies the rice blast resistance gene Pii.

OsHKT1;5 mediates Na+ exclusion in the vasculature to protect leaf blades and reproductive tissues from salt toxicity in rice

Regulatory mechanisms of ROI generation are affected by rice spl mutations.

Reply to Renner: Meticulous investigation, not sequencing effort, leads to robust conclusion

Rice alcohol dehydrogenase 1 promotes survival and has a major impact on carbohydrate metabolism in the embryo and endosperm when seeds are germinated in partially oxygenated water

SuperSAGE as an analytical tool for host and viral gene expression.

SuperSAGE combined with PCR walking allows global gene expression profiling of banana (Musa acuminata), a non-model organism

Technical advance: transcript profiling in rice (Oryza sativa L.) seedlings using serial analysis of gene expression (SAGE)

The cell death factor, cell wall elicitor of rice blast fungus (Magnaporthe grisea) causes metabolic alterations including GABA shunt in rice cultured cells

The gene expression landscape of thermogenic skunk cabbage suggests critical roles for mitochondrial and vacuolar metabolic pathways in the regulation of thermogenesis

Unraveling the roles of sphingolipids in plant innate immunity.