List of works - Markus Brinkmann

1st Young Environmental Scientists (YES) Meeting—New challenges in environmental sciences

A Novel Multispecies Toxicokinetic Modeling Approach in Support of Chemical Risk Assessment

scientific article published in 2021

A combined hydraulic and toxicological approach to assess re-suspended sediments during simulated flood events. Part I–multiple biomarkers in rainbow trout

article by Markus Brinkmann et al published 17 July 2010 in Journal of Soils and Sediments

A combined hydraulic and toxicological approach to assess re-suspended sediments during simulated flood events—part II: an interdisciplinary experimental methodology

article by Catrina Cofalla et al published 3 February 2012 in Journal of Soils and Sediments

A new approach to investigate the interactions between sediment transport and ecotoxicological processes during flood events

scientific article published in 2011

A physiologically based toxicokinetic (PBTK) model for moderately hydrophobic organic chemicals in the European eel (Anguilla anguilla).

scientific article published on 25 July 2015

A rapid and sensitive fluorometric method for determination of aldehyde oxidase activity.

scientific article published on 9 January 2018

A versatile and low-cost open source pipetting robot for automation of toxicological and ecotoxicological bioassays

scientific article

Acute Toxicity of the Tire Rubber-Derived Chemical 6PPD-quinone to Four Fishes of Commercial, Cultural, and Ecological Importance

scientific article published in 2022

Advancing In Vitro-In Vivo Extrapolations of Mechanism-Specific Toxicity Data Through Toxicokinetic Modeling

scientific article

An attempt to assess the relevance of flood events-biomarker response of rainbow trout exposed to resuspended natural sediments in an annular flume

scientific article published on 15 December 2013

An individual-based modeling approach for evaluation of endpoint sensitivity in harpacticoid copepod life-cycle tests and optimization of test design.

scientific article published on 12 August 2011

Are Honey Bees at Risk from Microplastics?

scientific article published on 17 May 2021

Are sediments a risk? An ecotoxicological assessment of sediments from a quarry pond of the Upper Rhine River

Assessing the fate of brown trout (Salmo trutta) environmental DNA in a natural stream using a sensitive and specific dual-labelled probe

scientific article published on 17 November 2018

Bioactivation of Quinolines in a Recombinant Estrogen Receptor Transactivation Assay Is Catalyzed by N-Methyltransferases

scientific article published on 28 March 2019

Bioanalytical and instrumental screening of the uptake of sediment-borne, dioxin-like compounds in roach (Rutilus rutilus).

scientific article published on 11 March 2016

Bioavailability and impacts of estrogenic compounds from suspended sediment on rainbow trout (Oncorhynchus mykiss)

scientific article published on 09 December 2020

Bone resorption and body reorganization during maturation induce maternal transfer of toxic metals in anguillid eels

scientific article published on 13 May 2019

Characterisation of transcriptional responses to dioxins and dioxin-like contaminants in roach (Rutilus rutilus) using whole transcriptome analysis

scientific article

Combined sediment desorption and bioconcentration model to predict levels of dioxin-like chemicals in fish

scientific article published on 09 December 2020

Comparative analysis of transcriptomic points-of-departure (tPODs) and apical responses in embryo-larval fathead minnows exposed to fluoxetine

scientific article published in 2022

Comparison of six sewage effluents treated with different treatment technologies--population level responses in the harpacticoid copepod Nitocra spinipes

scientific article published on 22 November 2009

Contrast-enhanced ultrasound imaging for assessing organ perfusion in rainbow trout (Oncorhynchus mykiss)

scientific article published on 05 August 2020

Contribution of priority PAHs and POPs to Ah receptor-mediated activities in sediment samples from the River Elbe Estuary, Germany

scientific article (publication date: 2013)

Corrigendum to "Assessing the fate of brown trout (Salmo trutta) environmental DNA in a natural stream using a sensitive and specific dual-labelled probe" [Sci. Total Environ. 655 (2019) 321-327]

scientific article published on 17 April 2019

Cross-Species Extrapolation of Uptake and Disposition of Neutral Organic Chemicals in Fish Using a Multispecies Physiologically-Based Toxicokinetic Model Framework

scientific article

Detection of SARS-CoV-2 in raw and treated wastewater in Germany - Suitability for COVID-19 surveillance and potential transmission risks

scientific article published on 18 August 2020

Determination of the CYP1A-inducing potential of single substances, mixtures and extracts of samples in the micro-EROD assay with H4IIE cells

scientific article published on 8 October 2015

Developing an Approach for Integrating Chemical Analysis and Transcriptional Changes to Assess Contaminants in Water, Sediment, and Fish

scientific article published in 2024

Development of a sensor and measurement platform for water quality observations: design, sensor integration, 3D printing, and open-source hardware ⬇️

scientific article

Differences in the subcellular distribution of cadmium and copper in the gills and liver of white sturgeon (Acipenser transmontanus) and rainbow trout (Oncorhynchus mykiss)

scientific article published on 01 December 2020

Differential responses of gut microbiota of male and female fathead minnow (Pimephales promelas) to a short-term environmentally-relevant, aqueous exposure to benzo[a]pyrene

scientific article published on 12 March 2020

Dioxin in the Elbe river basin: policy and science under the water framework directive 2000-2015 and toward 2021.

scientific article

Ecotoxicity of Nitrogen, Sulfur, or Oxygen Heterocycles and Short-Chained Alkyl Phenols Commonly Detected in Contaminated Groundwater

scientific article published on 13 May 2019

Effect-directed analysis of aryl hydrocarbon receptor agonists in sediments from the Three Gorges Reservoir, China

scientific article published on 18 September 2016

Effects of in situ experimental selenium exposure on finescale dace (Phoxinus neogaeus) gut microbiome

scientific article published in 2022

Effects of weathered sediment-bound dilbit on freshwater amphipods (Hyalella azteca)

scientific article published on 12 September 2020

Exposure to the Tire Rubber-Derived Contaminant 6PPD-Quinone Causes Mitochondrial Dysfunction In Vitro

scientific article published in 2022

Fipronil and two of its transformation products in water and European eel from the river Elbe

scientific article published on 9 June 2016

Generalized concentration addition accurately predicts estrogenic potentials of mixtures and environmental samples containing partial agonists

scientific article published on 21 October 2017

Genotoxicity of heterocyclic PAHs in the micronucleus assay with the fish liver cell line RTL-W1

scientific article (publication date: 2014)

Heterocyclic aromatic hydrocarbons show estrogenic activity upon metabolization in a recombinant transactivation assay

scientific article published on 29 April 2014

How flood events affect rainbow trout: evidence of a biomarker cascade in rainbow trout after exposure to PAH contaminated sediment suspensions.

scientific article

Impact of (18)F-FDG-PET/CT on staging and irradiation of patients with locally advanced rectal cancer

scientific article

In search for the ecological and toxicological relevance of sediment re-mobilisation and transport during flood events

In vitro bioassays for detecting dioxin-like activity--application potentials and limits of detection, a review

scientific article published on 22 April 2014

In vitro tools for the toxicological evaluation of sediments and dredged materials: intra- and inter-laboratory comparisons of chemical and bioanalytical methods

scientific article

In vitro-in vivo and cross-life stage extrapolation of uptake and biotransformation of benzo[a]pyrene in the fathead minnow (Pimephales promelas)

scientific article published on 15 September 2020

Levels of pesticides and trace metals in water, sediment, and fish of a large, agriculturally-dominated river

scientific article published in 2022

Looking back - Looking forward: A novel multi-time slice weight-of-evidence approach for defining reference conditions to assess the impact of human activities on lake systems

article

Mechanisms of pH-dependent uptake of ionizable organic chemicals by fish from oil sands process-affected water (OSPW)

scientific article published on 08 July 2020

Micro-computed tomography (μCT) as a novel method in ecotoxicology--determination of morphometric and somatic data in rainbow trout (Oncorhynchus mykiss).

scientific article

Morphological alterations in the liver of yellow perch (Perca flavescens) from a biological mercury hotspot

scientific article

New Insights into the Toxicokinetics of 3,4-Dichloroaniline in Early Life Stages of Zebrafish (Danio rerio)

scientific article published on 01 March 2020

News from the SETAC Europe Student Advisory Council (April 2013) - the 3rd Young Environmental Scientists (YES) meeting at the Jagiellonian University, Poland

article

News from the SETAC Europe Student Advisory Council - September 2012

scientific article published in 2012

Occurrences of Tire Rubber-Derived Contaminants in Cold-Climate Urban Runoff

scientific article

PAH metabolites, GST and EROD in European eel (Anguilla anguilla) as possible indicators for eel habitat quality in German rivers

scientific article published on 2 October 2013

Physiologically-based toxicokinetic models help identifying the key factors affecting contaminant uptake during flood events

scientific article

Population-level effects in Amphiascus tenuiremis: contrasting matrix- and individual-based population models

scientific article published on 23 October 2014

Project house water: a novel interdisciplinary framework to assess the environmental and socioeconomic consequences of flood-related impacts

scientific article

Quantitative assessment of the embryotoxic potential of NSO-heterocyclic compounds using zebrafish (Danio rerio)

article

Remobilization of pollutants during extreme flood events poses severe risks to human and environmental health

scientific article

SETAC Europe 19th annual meeting, Gothenburg, Sweden: Next step towards fulfilling students’ needs

scholarly article by Markus Brinkmann et al published 14 July 2009 in Environmental Sciences Europe

Sensitivity of a Model Reptile, the Common Snapping Turtle (Chelydra serpentina), to In Ovo Exposure to 2,3,7,8‐Tetrachlorodibenzo‐p‐Dioxin and Other Dioxin‐Like Chemicals

scientific article published in 2021

Solving freshwater conservation challenges through next-generation sequencing approaches

scientific article published in 2024

Some heterocyclic aromatic compounds are Ah receptor agonists in the DR-CALUX assay and the EROD assay with RTL-W1 cells

scientific article published on 23 March 2011

Temperature and food quantity effects on the harpacticoid copepod Nitocra spinipes: Combining in vivo bioassays with population modeling

scientific article

The 2015 Annual Meeting of SETAC German Language Branch in Zurich (7-10 September, 2015): Ecotoxicology and environmental chemistry-from research to application

scientific article

The Second Young Environmental Scientist (YES) meeting 2011 at RWTH Aachen University - environmental challenges in a changing world

scientific article published in 2011

The dioRAMA project: assessment of dioxin-like activity in sediments and fish (Rutilus rutilus) in support of the ecotoxicological characterization of sediments

The impact of extraction methodologies on the toxicity of sediments in the zebrafish (Danio rerio) embryo test

article

Toward Streamlined Identification of Dioxin-like Compounds in Environmental Samples through Integration of Suspension Bioassay

scientific article published on 13 February 2017

Toward understanding the impacts of sediment contamination on a native fish species: transcriptional effects, EROD activity, and biliary PAH metabolites

scientific article

Towards science-based sediment quality standards-Effects of field-collected sediments in rainbow trout (Oncorhynchus mykiss).

scientific article

Towards the review of the European Union Water Framework Directive: Recommendations for more efficient assessment and management of chemical contamination in European surface water resources

scientific article published on 27 October 2016

Toxizität und Risk Assessment fluvialer Sedimente und Schwebstoffe: Eine kurze Übersicht bisheriger und neuerer Entwicklungen

article published in 2010

Understanding receptor-mediated effects in rainbow trout: in vitro-in vivo extrapolation using physiologically based toxicokinetic models

scientific article published on 28 February 2014

Validation of the micro-EROD assay with H4IIE cells for assessing sediment contamination with dioxin-like chemicals

scientific article published on 09 June 2020

List of works by Markus Brinkmann

1st Young Environmental Scientists (YES) Meeting—New challenges in environmental sciences

A Novel Multispecies Toxicokinetic Modeling Approach in Support of Chemical Risk Assessment

A combined hydraulic and toxicological approach to assess re-suspended sediments during simulated flood events. Part I–multiple biomarkers in rainbow trout

A combined hydraulic and toxicological approach to assess re-suspended sediments during simulated flood events—part II: an interdisciplinary experimental methodology

A new approach to investigate the interactions between sediment transport and ecotoxicological processes during flood events

A physiologically based toxicokinetic (PBTK) model for moderately hydrophobic organic chemicals in the European eel (Anguilla anguilla).

A rapid and sensitive fluorometric method for determination of aldehyde oxidase activity.

A versatile and low-cost open source pipetting robot for automation of toxicological and ecotoxicological bioassays

Acute Toxicity of the Tire Rubber-Derived Chemical 6PPD-quinone to Four Fishes of Commercial, Cultural, and Ecological Importance

Advancing In Vitro-In Vivo Extrapolations of Mechanism-Specific Toxicity Data Through Toxicokinetic Modeling

An attempt to assess the relevance of flood events-biomarker response of rainbow trout exposed to resuspended natural sediments in an annular flume

An individual-based modeling approach for evaluation of endpoint sensitivity in harpacticoid copepod life-cycle tests and optimization of test design.

Are Honey Bees at Risk from Microplastics?

Are sediments a risk? An ecotoxicological assessment of sediments from a quarry pond of the Upper Rhine River

Assessing the fate of brown trout (Salmo trutta) environmental DNA in a natural stream using a sensitive and specific dual-labelled probe

Bioactivation of Quinolines in a Recombinant Estrogen Receptor Transactivation Assay Is Catalyzed by N-Methyltransferases

Bioanalytical and instrumental screening of the uptake of sediment-borne, dioxin-like compounds in roach (Rutilus rutilus).

Bioavailability and impacts of estrogenic compounds from suspended sediment on rainbow trout (Oncorhynchus mykiss)

Bone resorption and body reorganization during maturation induce maternal transfer of toxic metals in anguillid eels

Characterisation of transcriptional responses to dioxins and dioxin-like contaminants in roach (Rutilus rutilus) using whole transcriptome analysis

Combined sediment desorption and bioconcentration model to predict levels of dioxin-like chemicals in fish

Comparative analysis of transcriptomic points-of-departure (tPODs) and apical responses in embryo-larval fathead minnows exposed to fluoxetine

Comparison of six sewage effluents treated with different treatment technologies--population level responses in the harpacticoid copepod Nitocra spinipes

Contrast-enhanced ultrasound imaging for assessing organ perfusion in rainbow trout (Oncorhynchus mykiss)

Contribution of priority PAHs and POPs to Ah receptor-mediated activities in sediment samples from the River Elbe Estuary, Germany

Corrigendum to "Assessing the fate of brown trout (Salmo trutta) environmental DNA in a natural stream using a sensitive and specific dual-labelled probe" [Sci. Total Environ. 655 (2019) 321-327]

Cross-Species Extrapolation of Uptake and Disposition of Neutral Organic Chemicals in Fish Using a Multispecies Physiologically-Based Toxicokinetic Model Framework

Detection of SARS-CoV-2 in raw and treated wastewater in Germany - Suitability for COVID-19 surveillance and potential transmission risks

Determination of the CYP1A-inducing potential of single substances, mixtures and extracts of samples in the micro-EROD assay with H4IIE cells

Developing an Approach for Integrating Chemical Analysis and Transcriptional Changes to Assess Contaminants in Water, Sediment, and Fish

Development of a sensor and measurement platform for water quality observations: design, sensor integration, 3D printing, and open-source hardware ⬇️

Differences in the subcellular distribution of cadmium and copper in the gills and liver of white sturgeon (Acipenser transmontanus) and rainbow trout (Oncorhynchus mykiss)

Differential responses of gut microbiota of male and female fathead minnow (Pimephales promelas) to a short-term environmentally-relevant, aqueous exposure to benzo[a]pyrene

Dioxin in the Elbe river basin: policy and science under the water framework directive 2000-2015 and toward 2021.

Ecotoxicity of Nitrogen, Sulfur, or Oxygen Heterocycles and Short-Chained Alkyl Phenols Commonly Detected in Contaminated Groundwater

Effect-directed analysis of aryl hydrocarbon receptor agonists in sediments from the Three Gorges Reservoir, China

Effects of in situ experimental selenium exposure on finescale dace (Phoxinus neogaeus) gut microbiome

Effects of weathered sediment-bound dilbit on freshwater amphipods (Hyalella azteca)

Exposure to the Tire Rubber-Derived Contaminant 6PPD-Quinone Causes Mitochondrial Dysfunction <i>In Vitro</i>

Fipronil and two of its transformation products in water and European eel from the river Elbe

Generalized concentration addition accurately predicts estrogenic potentials of mixtures and environmental samples containing partial agonists

Genotoxicity of heterocyclic PAHs in the micronucleus assay with the fish liver cell line RTL-W1

Heterocyclic aromatic hydrocarbons show estrogenic activity upon metabolization in a recombinant transactivation assay

How flood events affect rainbow trout: evidence of a biomarker cascade in rainbow trout after exposure to PAH contaminated sediment suspensions.

Impact of (18)F-FDG-PET/CT on staging and irradiation of patients with locally advanced rectal cancer

In search for the ecological and toxicological relevance of sediment re-mobilisation and transport during flood events

In vitro bioassays for detecting dioxin-like activity--application potentials and limits of detection, a review

In vitro tools for the toxicological evaluation of sediments and dredged materials: intra- and inter-laboratory comparisons of chemical and bioanalytical methods

In vitro-in vivo and cross-life stage extrapolation of uptake and biotransformation of benzo[a]pyrene in the fathead minnow (Pimephales promelas)

Levels of pesticides and trace metals in water, sediment, and fish of a large, agriculturally-dominated river

Looking back - Looking forward: A novel multi-time slice weight-of-evidence approach for defining reference conditions to assess the impact of human activities on lake systems

Mechanisms of pH-dependent uptake of ionizable organic chemicals by fish from oil sands process-affected water (OSPW)

Micro-computed tomography (μCT) as a novel method in ecotoxicology--determination of morphometric and somatic data in rainbow trout (Oncorhynchus mykiss).

Morphological alterations in the liver of yellow perch (Perca flavescens) from a biological mercury hotspot

New Insights into the Toxicokinetics of 3,4-Dichloroaniline in Early Life Stages of Zebrafish (Danio rerio)

News from the SETAC Europe Student Advisory Council (April 2013) - the 3rd Young Environmental Scientists (YES) meeting at the Jagiellonian University, Poland

News from the SETAC Europe Student Advisory Council - September 2012

Occurrences of Tire Rubber-Derived Contaminants in Cold-Climate Urban Runoff

PAH metabolites, GST and EROD in European eel (Anguilla anguilla) as possible indicators for eel habitat quality in German rivers

Physiologically-based toxicokinetic models help identifying the key factors affecting contaminant uptake during flood events

Population-level effects in Amphiascus tenuiremis: contrasting matrix- and individual-based population models

Project house water: a novel interdisciplinary framework to assess the environmental and socioeconomic consequences of flood-related impacts

Quantitative assessment of the embryotoxic potential of NSO-heterocyclic compounds using zebrafish (Danio rerio)

Remobilization of pollutants during extreme flood events poses severe risks to human and environmental health

SETAC Europe 19th annual meeting, Gothenburg, Sweden: Next step towards fulfilling students’ needs

Sensitivity of a Model Reptile, the Common Snapping Turtle (<i>Chelydra serpentina</i>), to In Ovo Exposure to 2,3,7,8‐Tetrachlorodibenzo‐<i>p</i>‐Dioxin and Other Dioxin‐Like Chemicals

Solving freshwater conservation challenges through next-generation sequencing approaches

Some heterocyclic aromatic compounds are Ah receptor agonists in the DR-CALUX assay and the EROD assay with RTL-W1 cells

Temperature and food quantity effects on the harpacticoid copepod Nitocra spinipes: Combining in vivo bioassays with population modeling

The 2015 Annual Meeting of SETAC German Language Branch in Zurich (7-10 September, 2015): Ecotoxicology and environmental chemistry-from research to application

The Second Young Environmental Scientist (YES) meeting 2011 at RWTH Aachen University - environmental challenges in a changing world

The dioRAMA project: assessment of dioxin-like activity in sediments and fish (Rutilus rutilus) in support of the ecotoxicological characterization of sediments

The impact of extraction methodologies on the toxicity of sediments in the zebrafish (Danio rerio) embryo test

Toward Streamlined Identification of Dioxin-like Compounds in Environmental Samples through Integration of Suspension Bioassay

Toward understanding the impacts of sediment contamination on a native fish species: transcriptional effects, EROD activity, and biliary PAH metabolites

Towards science-based sediment quality standards-Effects of field-collected sediments in rainbow trout (Oncorhynchus mykiss).

Towards the review of the European Union Water Framework Directive: Recommendations for more efficient assessment and management of chemical contamination in European surface water resources

Toxizität und Risk Assessment fluvialer Sedimente und Schwebstoffe: Eine kurze Übersicht bisheriger und neuerer Entwicklungen

Understanding receptor-mediated effects in rainbow trout: in vitro-in vivo extrapolation using physiologically based toxicokinetic models