List of works by Patricio Jeraldo

<i>Porphyromonas somerae</i> Invasion of Endometrial Cancer Cells

scientific article published on 23 July 2021

A Possible Novel Prosthetic Joint Infection Pathogen, Mycoplasma salivarium, Identified by Metagenomic Shotgun Sequencing.

scientific article published on April 2017

Amplification of Femtograms of Bacterial DNA Within 3 h Using a Digital Microfluidics Platform for MinION Sequencing

scientific article published on 23 September 2021

An Immunocompromised Child with Bloodstream Infection Caused by Two Escherichia coli Strains, One Harboring NDM-5 and the Other Harboring OXA-48-Like Carbapenemase

scientific article published on 23 May 2016

An Increased Abundance of Clostridiaceae Characterizes Arthritis in Inflammatory Bowel Disease and Rheumatoid Arthritis: A Cross-sectional Study

scientific article published on 01 April 2019

Anisotropic velocity statistics of topological defects under shear flow.

scientific article published on 31 January 2012

Bacterial Single Cell Whole Transcriptome Amplification in Microfluidic Platform Shows Putative Gene Expression Heterogeneity

scientific article published on 12 June 2019

Capturing One of the Human Gut Microbiome's Most Wanted: Reconstructing the Genome of a Novel Butyrate-Producing, Clostridial Scavenger from Metagenomic Sequence Data.

scientific article

Carbapenem- and Colistin-Resistant Enterobacter cloacae from Delta, Colorado, in 2015.

scientific article

Cellulosomics, a gene-centric approach to investigating the intraspecific diversity and adaptation of Ruminococcus flavefaciens within the rumen

scientific article

Comparison of Three Commercial Tools for Metagenomic Shotgun Sequencing Analysis

scientific article published on 24 February 2020

Comparison of Whole-Genome Sequencing Methods for Analysis of Three Methicillin-Resistant Staphylococcus aureus Outbreaks

scientific article

Comparison of microbial DNA enrichment tools for metagenomic whole genome sequencing

scientific article published on 26 May 2016

Direct Detection and Identification of Prosthetic Joint Infection Pathogens in Synovial Fluid by Metagenomic Shotgun Sequencing

scientific article published on 27 August 2018

Distinct microbes, metabolites, and ecologies define the microbiome in deficient and proficient mismatch repair colorectal cancers

article

Draft Genome Sequences of Nine Pseudomonas aeruginosa Strains, Including Eight Clinical Isolates

scientific article published on 8 October 2015

Draft genome sequences of 24 microbial strains assembled from direct sequencing from 4 stool samples

scientific article published on 28 May 2015

Evaluation of the CosmosID Bioinformatics Platform for Prosthetic Joint-Associated Sonicate Fluid Shotgun Metagenomic Data Analysis

scientific article published on 30 January 2019

IM-TORNADO: a tool for comparison of 16S reads from paired-end libraries

scientific article published on 15 December 2014

Identification of Prosthetic Joint Infection Pathogens Using a Shotgun Metagenomics Approach.

scientific article published on 10 April 2018

Impact of Contaminating DNA in Whole-Genome Amplification Kits Used for Metagenomic Shotgun Sequencing for Infection Diagnosis

scientific article

Individualized medicine and the microbiome in reproductive tract

scientific article

Metronidazole- and carbapenem-resistant bacteroides thetaiotaomicron isolated in Rochester, Minnesota, in 2014.

scientific article published on 4 May 2015

Molecular epidemiology of Staphylococcus aureus bacteremia in a single large Minnesota medical center in 2015 as assessed using MLST, core genome MLST and spa typing

scientific article

Multiple sclerosis patients have a distinct gut microbiota compared to healthy controls

scientific article published on 27 June 2016

Optimizing Nanopore Sequencing for Rapid Detection of Microbial Species and Antimicrobial Resistance in Patients at Risk of Surgical Site Infections

scientific article published on 16 February 2022

Pregnancy's stronghold on the vaginal microbiome

scientific article

Prevotella histicola Protects From Arthritis by Expansion of Allobaculum and Augmenting Butyrate Production in Humanized Mice

scientific article published on 04 May 2021

Quantification of the relative roles of niche and neutral processes in structuring gastrointestinal microbiomes.

scientific article

Robust computational analysis of rRNA hypervariable tag datasets

scientific article (publication date: 31 December 2010)

Suppression of Inflammatory Arthritis by Human Gut-Derived Prevotella histicola in Humanized Mice.

scientific article published on 23 June 2016

Synthesis of multi-omic data and community metabolic models reveals insights into the role of hydrogen sulfide in colon cancer.

scientific article published on 26 April 2018

Systematic Bias Introduced by Genomic DNA Template Dilution in 16S rRNA Gene-Targeted Microbiota Profiling in Human Stool Homogenates.

scientific article published on 14 March 2018

The microbiome of the chicken gastrointestinal tract.

scientific article published on June 2012

Whole-genome sequencing for methicillin-resistant Staphylococcus aureus (MRSA) outbreak investigation in a neonatal intensive care unit

scientific article published on 04 October 2018

uses amino acids associated with gut microbial dysbiosis in a subset of patients with diarrhea

article

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