List of works by Thierry Lombardot

A standard MIGS/MIMS compliant XML Schema: toward the development of the Genomic Contextual Data Markup Language (GCDML).

scientific article

Archaea-like genes for C1-transfer enzymes in Planctomycetes: phylogenetic implications of their unexpected presence in this phylum

scientific article published on 01 November 2004

Clustered genes related to sulfate respiration in uncultured prokaryotes support the theory of their concomitant horizontal transfer

scientific article

Comparative genome analysis of four magnetotactic bacteria reveals a complex set of group-specific genes implicated in magnetosome biomineralization and function

scientific article published on 20 April 2007

Complete genome sequence of the marine planctomycete Pirellula sp. strain 1

scientific article

Detailed proteome analysis of growing cells of the planctomycete Rhodopirellula baltica SH1T.

scientific article

Enzyme annotation in UniProtKB using Rhea

scientific article published on 01 March 2020

Evaluation of the phylogenetic position of the planctomycete 'Rhodopirellula baltica' SH 1 by means of concatenated ribosomal protein sequences, DNA-directed RNA polymerase subunit sequences and whole genome trees

scientific article

Genome and proteome characterization of the psychrophilic Flavobacterium bacteriophage 11b.

scientific article

Insights into the genomes of archaea mediating the anaerobic oxidation of methane

scientific article

JCoast - a biologist-centric software tool for data mining and comparison of prokaryotic (meta)genomes

scientific article

Megx.net--database resources for marine ecological genomics

scientific article

MetaLook: a 3D visualisation software for marine ecological genomics

scientific article

MetaMine--a tool to detect and analyse gene patterns in their environmental context

scientific article (publication date: 28 October 2008)

TETRA: a web-service and a stand-alone program for the analysis and comparison of tetranucleotide usage patterns in DNA sequences

scientific article

The SIB Swiss Institute of Bioinformatics' resources: focus on curated databases

scientific article (publication date: 4 January 2016)

The transcriptional regulator pool of the marine bacterium Rhodopirellula baltica SH 1T as revealed by whole genome comparisons.

scientific article published in January 2005

Towards the proteome of the marine bacterium Rhodopirellula baltica: mapping the soluble proteins

scientific article

Updates in Rhea - an expert curated resource of biochemical reactions

scientific article

Updates in Rhea - an expert curated resource of biochemical reactions

scientific article published on 15 December 2016

Updates in Rhea--a manually curated resource of biochemical reactions

scientific article

Updates in Rhea: SPARQLing biochemical reaction data

scientific article

Whole genome analysis of the marine Bacteroidetes'Gramella forsetii' reveals adaptations to degradation of polymeric organic matter

scientific article published on December 2006

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