List of works - Valentin Vasselon

A taxonomy-free approach based on machine learning to assess the quality of rivers with diatoms

scientific article published on 12 March 2020

Application of high-throughput sequencing (HTS) metabarcoding to diatom biomonitoring: Do DNA extraction methods matter?

scientific article published in March 2017

Assessing ecological status with diatoms DNA metabarcoding: Scaling-up on a WFD monitoring network (Mayotte island, France)

scientific article published in November 2017

Avoiding quantification bias in metabarcoding: Application of a cell biovolume correction factor in diatom molecular biomonitoring

scientific article published on 22 January 2018

Benthic Diatom Communities in an Alpine River Impacted by Waste Water Treatment Effluents as Revealed Using DNA Metabarcoding

scientific article published on 09 April 2019

Boosting DNA metabarcoding for biomonitoring with phylogenetic estimation of operational taxonomic units’ ecological profiles

scientific article published on 13 July 2018

DNA metabarcoding and microscopic analyses of sea turtles biofilms: Complementary to understand turtle behavior.

scientific article

Diat.barcode, an open-access curated barcode library for diatoms

scientific article published on 22 October 2019

Do we similarly assess diversity with microscopy and high-throughput sequencing? Case of microalgae in lakes

scientific article published on 2 February 2018

Evaluation and sensitivity analysis of diatom DNA metabarcoding for WFD bioassessment of Mediterranean rivers

scientific article published on 04 April 2020

Freshwater biomonitoring in the Information Age

scientific article published on 15 May 2017

Key Questions for Next-Generation Biomonitoring

scientific article published on 08 January 2020

Metabarcoding of lake benthic diatoms: from structure assemblages to ecological assessment

scientific article published on 10 October 2017

R-Syst::diatom: an open-access and curated barcode database for diatoms and freshwater monitoring

scientific article published on 17 March 2016

River biofilm community changes related to pharmaceutical loads emitted by a wastewater treatment plant

scientific article published on 8 September 2017

Species sensitivity analysis as a tool for interpreting diatom metabarcoding for WFD bioassessment

scientific article published in 2021

Survival and growth of Stenotrophomonas maltophilia in free-living amoebae (FLA) and bacterial virulence properties

scientific article

The Wild Rivers Program: Development of a “Wild Rivers” Conservation Label to be used by River Management

scientific article published in 2021

The future of biotic indices in the ecogenomic era: Integrating (e)DNA metabarcoding in biological assessment of aquatic ecosystems

scientific article published in October 2018

The impact of OTU sequence similarity threshold on diatom-based bioassessment: A case study of the rivers of Mayotte (France, Indian Ocean)

article

The potential of High-Throughput Sequencing (HTS) of natural samples as a source of primary taxonomic information for reference libraries of diatom barcodes

scientific article published on 31 March 2018

Virulence test using nematodes to prescreen Nocardia species capable of inducing neurodegeneration and behavioral disorders