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List of works by Touati Benoukraf

A chemical biology approach reveals a dependency of glioblastoma on biotin distribution

scientific article published on 03 September 2021

A unique H3K4me2 profile marks tissue-specific gene regulation

scientific article

Acquired resistance to combination treatment through loss of synergy with MEK and PI3K inhibitors in colorectal cancer

scientific article published on 11 April 2016

Assessing the efficiency and significance of Methylated DNA Immunoprecipitation (MeDIP) assays in using in vitro methylated genomic DNA

scientific article

C/EBPα is required for development of dendritic cell progenitors.

scientific article published on April 2013

Characterisation of genome-wide PLZF/RARA target genes

scientific article

CoCAS: a ChIP-on-chip analysis suite

scientific article published on 04 February 2009

DNMT1-interacting RNAs block gene-specific DNA methylation

scientific article published on 09 October 2013

Datasets describing the growth and molecular features of hepatocellular carcinoma patient-derived xenograft cells grown in a three-dimensional macroporous hydrogel.

scientific article published on 17 March 2018

Disruption of the C/EBPα-miR-182 balance impairs granulocytic differentiation.

scientific article

Duality of enhancer functioning mode revealed in a reduced TCR beta gene enhancer knockin mouse model

scientific article published in December 2009

EVI2B is a C/EBPα target gene required for granulocytic differentiation and functionality of hematopoietic progenitors.

scientific article

Feasibility of low-throughput next generation sequencing for germline DNA screening

scientific article

GBSA: a comprehensive software for analysing whole genome bisulfite sequencing data.

scientific article

Generation of matched patient-derived xenograft in vitro-in vivo models using 3D macroporous hydrogels for the study of liver cancer.

scientific article published on 4 January 2018

H3K4 tri-methylation provides an epigenetic signature of active enhancers

scientific article

Increased intron retention is a post-transcriptional signature associated with progressive aging and Alzheimer's disease

scientific article published on 13 March 2019

Initiation of V(D)J recombination by Dbeta-associated recombination signal sequences: a critical control point in TCRbeta gene assembly

scientific article

LPS independent activation of the pro-inflammatory receptor Trem1 by C/EBPε in granulocytes

scientific article

Loss of USP28-mediated BRAF degradation drives resistance to RAF cancer therapies.

scientific article

MethMotif: an integrative cell specific database of transcription factor binding motifs coupled with DNA methylation profiles

scientific article published on 01 January 2019

Methodological aspects of whole-genome bisulfite sequencing analysis.

scientific article published on 27 May 2014

NanoVar: accurate characterization of patients' genomic structural variants using low-depth nanopore sequencing

scientific article published on 03 March 2020

NicE-seq: high resolution open chromatin profiling.

scientific article

PU.1-c-Jun interaction is crucial for PU.1 function in myeloid development

scientific article published in 2022

Pasha: a versatile R package for piling chromatin HTS data

scientific article

Phosphorylation of Tet3 by cdk5 is critical for robust activation of BRN2 during neuronal differentiation

scientific article published on 01 February 2020

Processing ChIP-chip data: from the scanner to the browser.

scientific article

TFregulomeR reveals transcription factors' context-specific features and functions

scientific article published on 01 January 2020

TIP60 represses activation of endogenous retroviral elements.

scientific article published in October 2018

Targeted Inhibition of Purine Metabolism Is Effective in Suppressing Hepatocellular Carcinoma Progression

scientific article published on 27 July 2020

The basic helix-loop-helix transcription factor SHARP1 is an oncogenic driver in MLL-AF6 acute myelogenous leukemia.

scientific article published on 24 April 2018

The gene signature in CCAAT-enhancer-binding protein α dysfunctional acute myeloid leukemia predicts responsiveness to histone deacetylase inhibitors

scientific article

Transposon mutagenesis identifies genes driving hepatocellular carcinoma in a chronic hepatitis B mouse model

scientific article

Wanted DEAD/H or Alive: Helicases Winding Up in Cancers.

scientific article published on 25 January 2017

Whole genome DNA methylation: beyond genes silencing

scientific article

ZNF143 mediates CTCF-bound promoter-enhancer loops required for murine hematopoietic stem and progenitor cell function

scientific article published on 04 January 2021

miREM: an expectation-maximization approach for prioritizing miRNAs associated with gene-set

article

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