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List of works by Jiming Jiang

A lineage-specific centromere retrotransposon in Oryza brachyantha

scientific article

Amplification and adaptation of centromeric repeats in polyploid switchgrass species.

scientific article published on 25 March 2018

Boom-Bust Turnovers of Megabase-Sized Centromeric DNA in Solanum Species: Rapid Evolution of DNA Sequences Associated with Centromeres

scientific article published on 11 April 2014

Chorus2: design of genome-scale oligonucleotide-based probes for fluorescence in situ hybridization

scientific article published on 14 May 2021

Chromosome painting in meiosis reveals pairing of specific chromosomes in polyploid Solanum species

scientific article published on 21 September 2018

Chromosome rearrangements during domestication of cucumber as revealed by high-density genetic mapping and draft genome assembly.

scientific article published on 9 July 2012

Chromosome-Specific Painting in Cucumis Species Using Bulked Oligonucleotides

scientific article published on 13 May 2015

Chromosome-scale genome assemblies and annotations for Poales species <i>Carex cristatella</i>, <i>Carex scoparia</i>, <i>Juncus effusus</i>, and <i>Juncus inflexus</i>

scientific article published in 2022

Cold stress induces enhanced chromatin accessibility and bivalent histone modifications H3K4me3 and H3K27me3 of active genes in potato.

scientific article

Comparative oligo-FISH Mapping: An Efficient and Powerful Methodology to Reveal Karyotypic and Chromosomal Evolution.

scientific article published on 13 December 2017

Comparison of Oryza sativa and Oryza brachyantha Genomes Reveals Selection-Driven Gene Escape from the Centromeric Regions

scientific article published on 02 July 2018

Construction of physical maps for the sex-specific regions of papaya sex chromosomes.

scientific article

Copy number variation in potato - an asexually propagated autotetraploid species.

scientific article published on 13 May 2013

Copy number variation of multiple genes at Rhg1 mediates nematode resistance in soybean

scientific article

Distinct Copy Number, Coding Sequence, and Locus Methylation Patterns Underlie Rhg1-Mediated Soybean Resistance to Soybean Cyst Nematode

scientific article published on 14 April 2014

Etiolated Stem Branching Is a Result of Systemic Signaling Associated with Sucrose Level

scientific article published on 31 August 2017

Extraordinarily conserved chromosomal synteny of Citrus species revealed by chromosome-specific painting

scientific article published on 23 June 2020

Fluorescence in situ hybridization in plants: recent developments and future applications.

scientific article published on 9 March 2019

Genome-Wide Nucleosome Occupancy and Positioning and Their Impact on Gene Expression and Evolution in Plants.

scientific article

Genome-Wide Prediction and Validation of Intergenic Enhancers in Arabidopsis Using Open Chromatin Signatures.

scientific article published on 15 September 2015

Genome-wide MNase hypersensitivity assay unveils distinct classes of open chromatin associated with H3K27me3 and DNA methylation in Arabidopsis thaliana

scientific article published on 03 February 2020

Genome-wide identification of regulatory DNA elements and protein-binding footprints using signatures of open chromatin in Arabidopsis.

scientific article published on 5 July 2012

Genome-wide nucleosome positioning is orchestrated by genomic regions associated with DNase I hypersensitivity in rice

scientific article

Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass

scientific article published on 27 January 2021

High-resolution mapping of open chromatin in the rice genome

scientific article published on 22 November 2011

Historical Meiotic Crossover Hotspots Fueled Patterns of Evolutionary Divergence in Rice

scientific article published on 31 January 2019

Insertional mutagenesis using Tnt1 retrotransposon in potato

scientific article published on 29 July 2013

Interstitial telomeric repeats are enriched in the centromeres of chromosomes in Solanum species.

scientific article published on 19 December 2012

LD-CNV: rapid and simple discovery of chromosomal translocations using linkage disequilibrium between copy number variable loci

scientific article published in 2021

Maize centromeres expand and adopt a uniform size in the genetic background of oat.

scientific article published on 07 October 2013

Meiotic crossovers are associated with open chromatin and enriched with Stowaway transposons in potato

scientific article published on 30 October 2017

Meiotic crossovers characterized by haplotype-specific chromosome painting in maize

scientific article published on 10 October 2019

Next-generation sequencing, FISH mapping and synteny-based modeling reveal mechanisms of decreasing dysploidy in Cucumis.

scientific article

Persistent whole-chromosome aneuploidy is generally associated with nascent allohexaploid wheat

scientific article published on 11 February 2013

Preferential meiotic chromosome pairing among homologous chromosomes with cryptic sequence variation in tetraploid maize

scientific article published on 22 November 2020

Proliferation of regulatory DNA elements derived from transposable elements in the maize genome.

scientific article published on 20 February 2018

Repeatless and repeat-based centromeres in potato: implications for centromere evolution.

scientific article published on 11 September 2012

Residual Heterozygosity and Epistatic Interactions Underlie the Complex Genetic Architecture of Yield in Diploid Potato

scientific article published on 18 March 2019

Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species

scientific article

Strong epigenetic similarity between maize centromeric and pericentromeric regions at the level of small RNAs, DNA methylation and H3 chromatin modifications.

scientific article published on 4 November 2011

The B73 Maize Genome: Complexity, Diversity, and Dynamics

scientific article

The CentO satellite confers translational and rotational phasing on cenH3 nucleosomes in rice centromeres

scientific article

Three potato centromeres are associated with distinct haplotypes with or without megabase-sized satellite repeat arrays

scientific article published on 06 December 2013

Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying Oryza genome evolution

scientific article

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