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List of works by Nina Pastor

A detailed interpretation of OH radical footprints in a TBP-DNA complex reveals the role of dynamics in the mechanism of sequence-specific binding

scientific article published on 01 November 2000

A family 13 thioesterase isolated from an activated sludge metagenome: Insights into aromatic compounds metabolism.

scientific article

A novel TctA citrate transporter from an activated sludge metagenome: Structural and mechanistic predictions for the TTT family

scientific article published on 19 February 2014

Analysis of the Binding of Expansin Exl1, from Pectobacterium carotovorum, to Plant Xylem and Comparison to EXLX1 from Bacillus subtilis

scientific article published on 28 June 2018

Calibrating nucleic acids torsional energetics in force-field: insights from model compounds

article

Computer-based screening of functional conformers of proteins.

scientific article

Convergent mechanisms favor fast amyloid formation in two lambda 6a Ig light chain mutants.

scientific article

Different Dynamics in 6aJL2 Proteins Associated with AL Amyloidosis, a Conformational Disease

scientific article published on 21 August 2019

Dissecting the protein architecture of DNA-binding transcription factors in bacteria and archaea.

scientific article published on 4 August 2017

Early expression of the receptor for advanced glycation end products in a toxic model produced by 6-hydroxydopamine in the rat striatum.

scientific article published on 18 February 2016

Electrostatic analysis of DNA binding properties in lysine to leucine mutants of TATA-box binding proteins

scientific article published on 01 June 1995

Electrostatic analysis of bacterial expansins.

scientific article published on 28 November 2014

Exploring the Role of Phenylalanine Residues in Modulating the Flexibility and Topography of the Active Site in the Peroxygenase Variant PaDa-I

scientific article published on 10 August 2020

FRET-based analysis and molecular modeling of the human GPN-loop GTPases 1 and 3 heterodimer unveils a dominant-negative protein complex

scientific article published on 22 July 2019

Human frataxin: iron and ferrochelatase binding surface.

scientific article

Identification of a Family of Glycoside Derivatives Biologically Active against Acinetobacter baumannii and Other MDR Bacteria Using a QSPR Model

scientific article published in 2023

Identification of a novel carbohydrate esterase from Bjerkandera adusta: structural and function predictions through bioinformatics analysis and molecular modeling

scientific article published on 24 January 2015

In silico analysis of missense mutations in exons 1-5 of the F9 gene that cause hemophilia B

scientific article published on 28 June 2019

In silico structure-based design of GABAB receptor agonists using a combination of docking and QSAR

scientific article published on 04 August 2019

Information flow and protein dynamics: the interplay between nuclear magnetic resonance spectroscopy and molecular dynamics simulations

scientific article published on 05 May 2015

Inhibition of Light Chain 6aJL2-R24G Amyloid Fiber Formation Associated with Light Chain Amyloidosis.

scientific article published on 27 July 2015

Interaction of the IP(3)-Ca(2+) and the FGF-MAPK signaling pathways in the Xenopus laevis embryo: a qualitative approach to the mesodermal induction problem

scientific article published in May 2002

Localized conformational changes trigger the pH-induced fibrillogenesis of an amyloidogenic λ light chain protein

scientific article published on 15 April 2018

Model of the TBP-TFIIB complex from Plasmodium falciparum: interface analysis and perspectives as a new target for antimalarial design.

scientific article published on July 2005

Modeling the interaction between quinolinate and the receptor for advanced glycation end products (RAGE): relevance for early neuropathological processes

scientific article

Molecular evolution of class A ?-lactamases: phylogeny and patterns of sequence conservation

scientific article published on 01 November 1990

Novel-Substituted Heterocyclic GABA Analogues. Enzymatic Activity against the GABA-AT Enzyme from Pseudomonas fluorescens and In Silico Molecular Modeling

scientific article published on 09 May 2018

On the consequences of placing amino groups at the TBP-DNA interface. Does TATA really matter?

scientific article

PcExl1 a novel acid expansin-like protein from the plant pathogen Pectobacterium carotovorum, binds cell walls differently to BsEXLX1.

scientific article

QSAR and Molecular Docking Studies of the Inhibitory Activity of Novel Heterocyclic GABA Analogues over GABA-AT

scientific article published on 15 November 2018

Replacement of oxidizable residues predicted by QM-MM simulation of a fungal laccase generates variants with higher operational stability

scientific article published on 12 October 2017

Revealing the Structural Contributions to Thermal Adaptation of the TATA-Box Binding Protein: Molecular Dynamics and QSPR Analyses

scientific article published on 22 January 2020

Role of a spatial distribution of IP3 receptors in the Ca2+ dynamics of the Xenopus embryo at the mid-blastula transition stage.

scientific article published in February 2005

Segmental motions of rat thymidylate synthase leading to half-the-sites behaviour

scientific article published on 01 June 2010

Soybean dihydrolipoamide dehydrogenase (ferric leghemoglobin reductase 2) interacts with and reduces ferric rice non-symbiotic hemoglobin 1.

scientific article published on January 2013

Synthetic peptide antigens derived from long-chain alpha-neurotoxins: Immunogenicity effect against elapid venoms.

scientific article published on 20 December 2016

The B- to A-DNA transition and the reorganization of solvent at the DNA surface.

scientific article published on 4 March 2005

The TATA-binding Protein DNA-binding domain of eukaryotic parasites is a potentially druggable target

scientific article published on 20 October 2019

The human adenovirus type 5 E1B 55kDa protein interacts with RNA promoting timely DNA replication and viral late mRNA metabolism

article

Two novel mutations in ZAP70 gene that result in human immunodeficiency

scientific article published on 11 September 2017

Use of in silico (computer) methods to predict and analyze the tertiary structure of plant hemoglobins.

scientific article