List of works - Eric D Merkley

A temperature-dependent conformational change of NADH oxidase from Thermus thermophilus HB8.

scientific article published on 12 November 2011

Applications and challenges of forensic proteomics

scientific article published on 22 January 2019

Conformational changes below the Tm: molecular dynamics studies of the thermal pretransition of ribonuclease A

scientific article published on 28 December 2007

Constructing a Tandem Mass Spectral Library for Forensic Ricin Identification

scientific article published on 14 October 2019

Cross-linking and mass spectrometry methodologies to facilitate structural biology: finding a path through the maze

scientific article published on 07 August 2013

Detection and identification of heme c-modified peptides by histidine affinity chromatography, high-performance liquid chromatography-mass spectrometry, and database searching

scientific article published on 2 November 2012

Distance restraints from crosslinking mass spectrometry: mining a molecular dynamics simulation database to evaluate lysine-lysine distances

scientific article

Dynameomics: a comprehensive database of protein dynamics

scientific article

Flying Blind, or Just Flying Under the Radar? The Underappreciated Power of de novo Methods of Mass Spectrometric Peptide Identification

scientific article published on 26 July 2020

Identification and Characterization of MtoA: A Decaheme c-Type Cytochrome of the Neutrophilic Fe(II)-Oxidizing Bacterium Sideroxydans lithotrophicus ES-1.

scientific article published on 8 February 2012

Investigation of Yersinia pestis Laboratory Adaptation through a Combined Genomics and Proteomics Approach

scientific article

Live cell chemical profiling of temporal redox dynamics in a photoautotrophic cyanobacterium

scientific article published on 6 November 2013

Mixed-isotope labeling with LC-IMS-MS for characterization of protein-protein interactions by chemical cross-linking.

scientific article published on 20 February 2013

Mutations in global regulators lead to metabolic selection during adaptation to complex environments

scientific article

Probabilistic Limit of Detection for Ricin Identification Using a Shotgun Proteomics Assay

scientific article published on 20 September 2019

Protein abundances can distinguish between naturally-occurring and laboratory strains of Yersinia pestis, the causative agent of plague

scientific article

Proteomics of natural bacterial isolates powered by deep learning-based de novo identification

scholarly article published 27 September 2018

Ricin-like proteins from the castor plant do not influence liquid chromatography-mass spectrometry detection of ricin in forensically relevant samples

scientific article published on 12 October 2017

Temperature dependence of the flexibility of thermophilic and mesophilic flavoenzymes of the nitroreductase fold

scientific article

The succinated proteome

scientific article

Uniformly 15N-Labeled Recombinant Ricin A-Chain as an Internal Retention Time Standard for Increased Confidence in Forensic Identification of Ricin by Untargeted Nanoflow Liquid Chromatography-Tandem Mass Spectrometry

scientific article published on 22 October 2019

List of works by Eric D Merkley

A temperature-dependent conformational change of NADH oxidase from Thermus thermophilus HB8.

Applications and challenges of forensic proteomics

Conformational changes below the Tm: molecular dynamics studies of the thermal pretransition of ribonuclease A

Constructing a Tandem Mass Spectral Library for Forensic Ricin Identification

Cross-linking and mass spectrometry methodologies to facilitate structural biology: finding a path through the maze

Detection and identification of heme c-modified peptides by histidine affinity chromatography, high-performance liquid chromatography-mass spectrometry, and database searching

Distance restraints from crosslinking mass spectrometry: mining a molecular dynamics simulation database to evaluate lysine-lysine distances

Dynameomics: a comprehensive database of protein dynamics

Flying Blind, or Just Flying Under the Radar? The Underappreciated Power of de novo Methods of Mass Spectrometric Peptide Identification

Identification and Characterization of MtoA: A Decaheme c-Type Cytochrome of the Neutrophilic Fe(II)-Oxidizing Bacterium Sideroxydans lithotrophicus ES-1.

Investigation of Yersinia pestis Laboratory Adaptation through a Combined Genomics and Proteomics Approach

Live cell chemical profiling of temporal redox dynamics in a photoautotrophic cyanobacterium

Mixed-isotope labeling with LC-IMS-MS for characterization of protein-protein interactions by chemical cross-linking.

Mutations in global regulators lead to metabolic selection during adaptation to complex environments

Probabilistic Limit of Detection for Ricin Identification Using a Shotgun Proteomics Assay

Protein abundances can distinguish between naturally-occurring and laboratory strains of Yersinia pestis, the causative agent of plague

Proteomics of natural bacterial isolates powered by deep learning-based de novo identification

Ricin-like proteins from the castor plant do not influence liquid chromatography-mass spectrometry detection of ricin in forensically relevant samples

Temperature dependence of the flexibility of thermophilic and mesophilic flavoenzymes of the nitroreductase fold

The succinated proteome

Uniformly 15N-Labeled Recombinant Ricin A-Chain as an Internal Retention Time Standard for Increased Confidence in Forensic Identification of Ricin by Untargeted Nanoflow Liquid Chromatography-Tandem Mass Spectrometry