List of works - Virginia P. Edgcomb

A molecular and physiological survey of a diverse collection of hydrothermal vent Thermococcus and Pyrococcus isolates

scientific article published on 11 September 2009

A resurgence in field research is essential to better understand the diversity, ecology, and evolution of microbial eukaryotes.

scientific article

Accessing marine protists from the anoxic Cariaco Basin ⬇️

scientific article published on March 10, 2011

Active eukaryotes in microbialites from Highborne Cay, Bahamas, and Hamelin Pool (Shark Bay), Australia

scientific article

Aethozooides uraniae, a new deep-sea genus and species of solitary bryozoan from the Mediterranean Sea, with a revision of the Aethozoidae ⬇️

scientific article published on 4 April 2019

Anaerobic ciliates as a model group for studying symbioses in oxygen‐depleted environments

scientific article published on 3 May 2022

Anomalous δ 13 C in Particulate Organic Carbon at the Chemoautotrophy Maximum in the Cariaco Basin

scientific article published in February 2020

Benthic eukaryotic diversity in the Guaymas Basin hydrothermal vent environment.

scientific article

Benthic protists and fungi of Mediterranean deep hypsersaline anoxic basin redoxcline sediments.

scientific article published on 12 November 2014

Ciliates along oxyclines of permanently stratified marine water columns.

scientific article

Class Cariacotrichea, a novel ciliate taxon from the anoxic Cariaco Basin, Venezuela.

scientific article

Combined Culture-Based and Culture-Independent Approaches Provide Insights into Diversity of Jakobids, an Extremely Plesiomorphic Eukaryotic Lineage

scientific article

Deep sequencing of subseafloor eukaryotic rRNA reveals active Fungi across marine subsurface provinces

scientific article

Deep subsurface microbiology: a guide to the research topic papers

scientific article (publication date: 2013)

Deep-sea hydrothermal vent sediments reveal diverse fungi with antibacterial activities

scientific article published in 2021

Denitrification likely catalyzed by endobionts in an allogromiid foraminifer

scientific article published in December 2011

Depth shapes α- and β-diversities of microbial eukaryotes in surficial sediments of coastal ecosystems.

scientific article published on 11 January 2015

Diverse nitrogen cycling pathways across a marine oxygen gradient indicate nitrogen loss coupled to chemoautotrophic activity

scientific article published on 05 August 2020

Ecogenomics reveals viral communities across the Challenger Deep oceanic trench

scientific article published in 2022

Ecological variables for deep-ocean monitoring must include microbiota and meiofauna for effective conservation

scientific article published on 16 November 2020

Effect of oxygen minimum zone formation on communities of marine protists

scientific article

Effects of dissolved sulfide, pH, and temperature on growth and survival of marine hyperthermophilic Archaea

scientific article

Environmental determinants of the distribution of planktonic diplonemids and kinetoplastids in the oceans

scientific article published on 10 August 2020

Environmental factors shaping bacterial, archaeal and fungal community structure in hydrothermal sediments of Guaymas Basin, Gulf of California

scientific article published in 2021

Environmental selection of protistan plankton communities in hypersaline anoxic deep-sea basins, Eastern Mediterranean Sea

scientific article

Eukaryotic Parasites Are Integral to a Productive Microbial Food Web in Oxygen-Depleted Waters

scientific article published on 01 January 2021

Evidence for isolated evolution of deep-sea ciliate communities through geological separation and environmental selection

scientific article (publication date: 8 July 2013)

Evolutionary history of "early-diverging" eukaryotes: the excavate taxon Carpediemonas is a close relative of Giardia.

scientific article

Evolutionary relationships among "jakobid" flagellates as indicated by alpha- and beta-tubulin phylogenies.

scientific article

Free-living chemoautotrophic and particle-attached heterotrophic prokaryotes dominate microbial assemblages along a pelagic redox gradient

scientific article

Fungal and Prokaryotic Activities in the Marine Subsurface Biosphere at Peru Margin and Canterbury Basin Inferred from RNA-Based Analyses and Microscopy

scientific article published on 09 June 2016

Fungi in the Marine Environment: Open Questions and Unsolved Problems

scientific article published on 05 March 2019

Gene expression in the deep biosphere

scientific article published on 12 June 2013

Gene expression profiling of microbial activities and interactions in sediments under haloclines of E. Mediterranean deep hypersaline anoxic basins.

scientific article published on 19 April 2016

Genetic tool development in marine protists: emerging model organisms for experimental cell biology

scientific article published on 06 April 2020

Genomics of New Ciliate Lineages Provides Insight into the Evolution of Obligate Anaerobiosis

scientific article published on 18 April 2020

Heat flow and thermal regime in the Guaymas Basin, Gulf of California: Estimates of conductive and advective heat transport

scholarly article

Heterotrophic protists in hypersaline microbial mats and deep hypersaline basin water columns

scientific article published on 22 May 2013

Highlighting the Biotechnological Potential of Deep Oceanic Crust Fungi through the Prism of Their Antimicrobial Activity

scientific article published in 2021

Identity of epibiotic bacteria on symbiontid euglenozoans in O2-depleted marine sediments: evidence for symbiont and host co-evolution

scientific article

In-depth analyses of deep subsurface sediments using 454-pyrosequencing reveals a reservoir of buried fungal communities at record-breaking depths.

scientific article

Insights into foraminiferal influences on microfabrics of microbialites at Highborne Cay, Bahamas

scientific article

Insights into the metabolic functioning of a multipartner ciliate symbiosis from oxygen-depleted sediments

scientific article published on 22 December 2017

Inter-comparison of the potentially active prokaryotic communities in the halocline sediments of Mediterranean deep-sea hypersaline basins

scientific article published on 16 July 2015

Living at the Limits: Evidence for Microbial Eukaryotes Thriving under Pressure in Deep Anoxic, Hypersaline Habitats

article

Marine protist associations and environmental impacts across trophic levels in the twilight zone and below.

scientific article published on 16 April 2016

Marine subsurface eukaryotes: the fungal majority.

scientific article

Massively parallel tag sequencing reveals the complexity of anaerobic marine protistan communities

scientific article

Meta-Omics highlights the diversity, activity and adaptations of fungi in deep oceanic crust

scientific article published on 02 August 2020

Metatranscriptomics and metabarcoding reveal spatiotemporal shifts in fungal communities and their activities in Chinese coastal waters

scientific article published in 2023

Metazoans of redoxcline sediments in Mediterranean deep-sea hypersaline anoxic basins

scientific article (publication date: 2015)

Microbial cell distribution in the Guaymas Basin subseafloor biosphere, a young marginal rift basin with rich organics and steep temperature gradient

scientific article published on 27 March 2022

Microbial cell distribution in the Guaymas Basin subseafloor biosphere, a young marginal rift basin with rich organics and steep temperature gradient

Microbial diversity of hydrothermal sediments in the Guaymas Basin: evidence for anaerobic methanotrophic communities

scientific article

Microbial eukaryote diversity in the marine oxygen minimum zone off northern Chile

scientific article

Microbial eukaryote life in the new hypersaline deep-sea basin Thetis

scientific article published on 19 October 2011

Molecular analysis of deep subsurface microbial communities in Nankai Trough sediments (ODP Leg 190, Site 1176)

article

Molecular evolution inferred from small subunit rRNA sequences: what does it tell us about phylogenetic relationships and taxonomy of the parabasalids?

scientific article

Molecular indicators of microbial diversity in oolitic sands of Highborne Cay, Bahamas.

scientific article

Molecular phylogenies of Blastocystis isolates from different hosts: implications for genetic diversity, identification of species, and zoonosis

scientific article

Molecular phylogeny of parabasalids based on small subunit rRNA sequences, with emphasis on the Trichomonadinae subfamily

scientific article published on 01 January 2000

Molecular phylogeny of parabasalids inferred from small subunit rRNA sequences, with emphasis on the Devescovinidae and Calonymphidae (Trichomonadea).

scientific article published in December 2002

New Insights into the Phylogeny of Trichomonads Inferred from Small Subunit rRNA Sequences

scientific article published on 01 December 1998

Pelobionts are degenerate protists: insights from molecules and morphology.

scientific article

Phylogenetic analysis of Blastocystis isolates from different hosts based on the comparison of small-subunit rRNA gene sequences

scientific article (publication date: 2003)

Phylogenetic position of the trichomonad parasite of turkeys, Histomonas meleagridis (Smith) Tyzzer, inferred from small subunit rRNA sequence.

scientific article published in July 2001

Phylogenetic relationships of class II fumarase genes from trichomonad species.

scientific article published in August 2001

Planktonic Marine Fungi: A Review

scientific article published in March 2024

Potential importance of physiologically diverse benthic foraminifera in sedimentary nitrate storage and respiration

scientific article published in 2012

Presence of the oral bacterium Capnocytophaga canimorsus in the tooth plaque of canines

scientific article

Prevalence of partnerships between bacteria and ciliates in oxygen-depleted marine water columns.

scientific article

Protist Community Grazing on Prokaryotic Prey in Deep Ocean Water Masses

scientific article

Protistan community patterns within the brine and halocline of deep hypersaline anoxic basins in the eastern Mediterranean Sea.

scientific article published on 5 December 2008

Protistan microbial observatory in the Cariaco Basin, Caribbean. I. Pyrosequencing vs Sanger insights into species richness

scientific article

Protistan microbial observatory in the Cariaco Basin, Caribbean. II. Habitat specialization.

scientific article

Publisher Correction: Genetic tool development in marine protists: emerging model organisms for experimental cell biology

scientific article published on 15 April 2020

Recycling and metabolic flexibility dictate life in the lower oceanic crust

scientific article published on 11 March 2020

Revisiting the pink-red pigmented basidiomycete mirror yeast of the phyllosphere

scientific article (publication date: October 2016)

Size-fractionated diversity of eukaryotic microbial communities in the Eastern Tropical North Pacific oxygen minimum zone.

scientific article published on April 2015

Sterane and hopane biomarkers capture microbial transformations of complex hydrocarbons in young hydrothermal Guaymas Basin sediments

scholarly article

Strength in numbers: Collaborative science for new experimental model systems

scientific article published on 02 July 2018

Structured multiple endosymbiosis of bacteria and archaea in a ciliate from marine sulfidic sediments: a survival mechanism in low oxygen, sulfidic sediments?

scientific article

Sulfide ameliorates metal toxicity for deep-sea hydrothermal vent archaea

scientific article published on April 2004

Survival and growth of two heterotrophic hydrothermal vent archaea, Pyrococcus strain GB-D and Thermococcus fumicolans, under low pH and high sulfide concentrations in combination with high temperature and pressure regimes

scientific article published on 17 November 2006

Symbiotic magnetic motility

scientific article published on 01 July 2019

The Diversity of Sulfide Oxidation and Sulfate Reduction Genes Expressed by the Bacterial Communities of the Cariaco Basin, Venezuela

scientific article published on 31 August 2016

The diversity and abundance of bacteria inhabiting seafloor lavas positively correlate with rock alteration

scientific article

The genome of an endosymbiotic methanogen is very similar to those of its free-living relatives

scientific article published on 01 July 2018

The presence of four iron-containing superoxide dismutase isozymes in trypanosomatidae: characterization, subcellular localization, and phylogenetic origin in Trypanosoma brucei

scientific article

Toward establishing model organisms for marine protists: Successful transfection protocols for Parabodo caudatus (Kinetoplastida: Excavata).

scientific article published on 19 June 2017

Ultrastructure and molecular phylogeny of Calkinsia aureus: cellular identity of a novel clade of deep-sea euglenozoans with epibiotic bacteria

scientific article

Understanding the Role of the Biological Pump in the Global Carbon Cycle: An Imperative for Ocean Science

article

UniEuk: Time to Speak a Common Language in Protistology!

scientific article

Unveiling microbial activities along the halocline of Thetis, a deep-sea hypersaline anoxic basin.

scientific article

Vibrio cholerae non-O1, non-O139 associated with seawater and plankton from coastal marine areas of the Caribbean Sea.

scientific article

Viral elements and their potential influence on microbial processes along the permanently stratified Cariaco Basin redoxcline

scientific article published on 14 August 2020

List of works by Virginia P. Edgcomb

A molecular and physiological survey of a diverse collection of hydrothermal vent Thermococcus and Pyrococcus isolates

A resurgence in field research is essential to better understand the diversity, ecology, and evolution of microbial eukaryotes.

Accessing marine protists from the anoxic Cariaco Basin ⬇️

Active eukaryotes in microbialites from Highborne Cay, Bahamas, and Hamelin Pool (Shark Bay), Australia

Aethozooides uraniae, a new deep-sea genus and species of solitary bryozoan from the Mediterranean Sea, with a revision of the Aethozoidae ⬇️

Anaerobic ciliates as a model group for studying symbioses in oxygen‐depleted environments

Anomalous δ 13 C in Particulate Organic Carbon at the Chemoautotrophy Maximum in the Cariaco Basin

Benthic eukaryotic diversity in the Guaymas Basin hydrothermal vent environment.

Benthic protists and fungi of Mediterranean deep hypsersaline anoxic basin redoxcline sediments.

Ciliates along oxyclines of permanently stratified marine water columns.

Class Cariacotrichea, a novel ciliate taxon from the anoxic Cariaco Basin, Venezuela.

Combined Culture-Based and Culture-Independent Approaches Provide Insights into Diversity of Jakobids, an Extremely Plesiomorphic Eukaryotic Lineage

Deep sequencing of subseafloor eukaryotic rRNA reveals active Fungi across marine subsurface provinces

Deep subsurface microbiology: a guide to the research topic papers

Deep-sea hydrothermal vent sediments reveal diverse fungi with antibacterial activities

Denitrification likely catalyzed by endobionts in an allogromiid foraminifer

Depth shapes α- and β-diversities of microbial eukaryotes in surficial sediments of coastal ecosystems.

Diverse nitrogen cycling pathways across a marine oxygen gradient indicate nitrogen loss coupled to chemoautotrophic activity

Ecogenomics reveals viral communities across the Challenger Deep oceanic trench

Ecological variables for deep-ocean monitoring must include microbiota and meiofauna for effective conservation

Effect of oxygen minimum zone formation on communities of marine protists

Effects of dissolved sulfide, pH, and temperature on growth and survival of marine hyperthermophilic Archaea

Environmental determinants of the distribution of planktonic diplonemids and kinetoplastids in the oceans

Environmental factors shaping bacterial, archaeal and fungal community structure in hydrothermal sediments of Guaymas Basin, Gulf of California

Environmental selection of protistan plankton communities in hypersaline anoxic deep-sea basins, Eastern Mediterranean Sea

Eukaryotic Parasites Are Integral to a Productive Microbial Food Web in Oxygen-Depleted Waters

Evidence for isolated evolution of deep-sea ciliate communities through geological separation and environmental selection

Evolutionary history of "early-diverging" eukaryotes: the excavate taxon Carpediemonas is a close relative of Giardia.

Evolutionary relationships among "jakobid" flagellates as indicated by alpha- and beta-tubulin phylogenies.

Free-living chemoautotrophic and particle-attached heterotrophic prokaryotes dominate microbial assemblages along a pelagic redox gradient

Fungal and Prokaryotic Activities in the Marine Subsurface Biosphere at Peru Margin and Canterbury Basin Inferred from RNA-Based Analyses and Microscopy

Fungi in the Marine Environment: Open Questions and Unsolved Problems

Gene expression in the deep biosphere

Gene expression profiling of microbial activities and interactions in sediments under haloclines of E. Mediterranean deep hypersaline anoxic basins.

Genetic tool development in marine protists: emerging model organisms for experimental cell biology

Genomics of New Ciliate Lineages Provides Insight into the Evolution of Obligate Anaerobiosis

Heat flow and thermal regime in the Guaymas Basin, Gulf of California: Estimates of conductive and advective heat transport

Heterotrophic protists in hypersaline microbial mats and deep hypersaline basin water columns

Highlighting the Biotechnological Potential of Deep Oceanic Crust Fungi through the Prism of Their Antimicrobial Activity

Identity of epibiotic bacteria on symbiontid euglenozoans in O2-depleted marine sediments: evidence for symbiont and host co-evolution

In-depth analyses of deep subsurface sediments using 454-pyrosequencing reveals a reservoir of buried fungal communities at record-breaking depths.

Insights into foraminiferal influences on microfabrics of microbialites at Highborne Cay, Bahamas

Insights into the metabolic functioning of a multipartner ciliate symbiosis from oxygen-depleted sediments

Inter-comparison of the potentially active prokaryotic communities in the halocline sediments of Mediterranean deep-sea hypersaline basins

Living at the Limits: Evidence for Microbial Eukaryotes Thriving under Pressure in Deep Anoxic, Hypersaline Habitats

Marine protist associations and environmental impacts across trophic levels in the twilight zone and below.

Marine subsurface eukaryotes: the fungal majority.

Massively parallel tag sequencing reveals the complexity of anaerobic marine protistan communities

Meta-Omics highlights the diversity, activity and adaptations of fungi in deep oceanic crust

Metatranscriptomics and metabarcoding reveal spatiotemporal shifts in fungal communities and their activities in Chinese coastal waters

Metazoans of redoxcline sediments in Mediterranean deep-sea hypersaline anoxic basins

Microbial cell distribution in the Guaymas Basin subseafloor biosphere, a young marginal rift basin with rich organics and steep temperature gradient

Microbial cell distribution in the Guaymas Basin subseafloor biosphere, a young marginal rift basin with rich organics and steep temperature gradient

Microbial diversity of hydrothermal sediments in the Guaymas Basin: evidence for anaerobic methanotrophic communities

Microbial eukaryote diversity in the marine oxygen minimum zone off northern Chile

Microbial eukaryote life in the new hypersaline deep-sea basin Thetis

Molecular analysis of deep subsurface microbial communities in Nankai Trough sediments (ODP Leg 190, Site 1176)

Molecular evolution inferred from small subunit rRNA sequences: what does it tell us about phylogenetic relationships and taxonomy of the parabasalids?

Molecular indicators of microbial diversity in oolitic sands of Highborne Cay, Bahamas.

Molecular phylogenies of Blastocystis isolates from different hosts: implications for genetic diversity, identification of species, and zoonosis

Molecular phylogeny of parabasalids based on small subunit rRNA sequences, with emphasis on the Trichomonadinae subfamily

Molecular phylogeny of parabasalids inferred from small subunit rRNA sequences, with emphasis on the Devescovinidae and Calonymphidae (Trichomonadea).

New Insights into the Phylogeny of Trichomonads Inferred from Small Subunit rRNA Sequences

Pelobionts are degenerate protists: insights from molecules and morphology.

Phylogenetic analysis of Blastocystis isolates from different hosts based on the comparison of small-subunit rRNA gene sequences

Phylogenetic position of the trichomonad parasite of turkeys, Histomonas meleagridis (Smith) Tyzzer, inferred from small subunit rRNA sequence.

Phylogenetic relationships of class II fumarase genes from trichomonad species.

Planktonic Marine Fungi: A Review

Potential importance of physiologically diverse benthic foraminifera in sedimentary nitrate storage and respiration

Presence of the oral bacterium Capnocytophaga canimorsus in the tooth plaque of canines

Prevalence of partnerships between bacteria and ciliates in oxygen-depleted marine water columns.

Protist Community Grazing on Prokaryotic Prey in Deep Ocean Water Masses

Protistan community patterns within the brine and halocline of deep hypersaline anoxic basins in the eastern Mediterranean Sea.

Protistan microbial observatory in the Cariaco Basin, Caribbean. I. Pyrosequencing vs Sanger insights into species richness

Protistan microbial observatory in the Cariaco Basin, Caribbean. II. Habitat specialization.

Publisher Correction: Genetic tool development in marine protists: emerging model organisms for experimental cell biology

Recycling and metabolic flexibility dictate life in the lower oceanic crust

Revisiting the pink-red pigmented basidiomycete mirror yeast of the phyllosphere

Size-fractionated diversity of eukaryotic microbial communities in the Eastern Tropical North Pacific oxygen minimum zone.