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List of works by Jan Budczies

An online survival analysis tool to rapidly assess the effect of 22,277 genes on breast cancer prognosis using microarray data of 1,809 patients

scientific article

Chromosome 9p copy number gains involving PD-L1 are associated with a specific proliferation and immune-modulating gene expression program active across major cancer types

scientific article published on 6 December 2017

Combined targeted DNA and RNA sequencing of advanced NSCLC in routine molecular diagnostics: Analysis of the first 3,000 Heidelberg cases

scientific article published on 19 February 2019

Cutoff Finder: a comprehensive and straightforward Web application enabling rapid biomarker cutoff optimization

scientific article

Differential expression of histone deacetylases HDAC1, 2 and 3 in human breast cancer - overexpression of HDAC2 and HDAC3 is associated with clinicopathological indicators of disease progression ⬇️

scientific article published on April 30, 2013

Genomic architecture of FGFR2 fusions in cholangiocarcinoma and its implication for molecular testing

scientific article published in 2022

Histopathological regression grading matches excellently with local and regional spread after neoadjuvant therapy of rectal cancer ⬇️

scientific article published on April 30, 2013

Identification of a highly lethal V3+ TP53+ subset in ALK+ lung adenocarcinoma

scientific article published on 30 October 2018

Integrated clinicomolecular characterization identifies RAS activation and CDKN2A deletion as independent adverse prognostic factors in cancer of unknown primary

scientific article published on 11 March 2020

Ioncopy: an R Shiny app to call copy number alterations in targeted NGS data.

scientific article published on 24 April 2018

Locally recurrent colorectal cancer: results of surgical therapy ⬇️

scientific article published on June 28, 2012

Morphomolecular analysis of the immune tumor microenvironment in human head and neck cancer

scientific article published on 23 August 2019

Online survival analysis software to assess the prognostic value of biomarkers using transcriptomic data in non-small-cell lung cancer

scientific article

Size matters: Dissecting key parameters for panel-based tumor mutational burden analysis

scientific article published on 04 December 2018

The EndoPredict Gene-Expression Assay in Clinical Practice - Performance and Impact on Clinical Decisions ⬇️

scientific article published on June 27, 2013

The Novel Histologic International Association for the Study of Lung Cancer/American Thoracic Society/European Respiratory Society Classification System of Lung Adenocarcinoma Is a Stage-Independent Predictor of Survival ⬇️

scientific article published on March 5, 2012

Thymosin beta 15A (TMSB15A) is a predictor of chemotherapy response in triple-negative breast cancer ⬇️

scientific article published on October 18, 2012

Tumor-associated lymphocytes as an independent predictor of response to neoadjuvant chemotherapy in breast cancer

scientific article published on 16 November 2009

Variant classification in precision oncology

scientific article published on 21 May 2019

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