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List of works by Shannon K McDonnell

A Germline DNA Polymorphism Enhances Alternative Splicing of theKLF6Tumor Suppressor Gene and Is Associated with Increased Prostate Cancer Risk

article

A combined genomewide linkage scan of 1,233 families for prostate cancer-susceptibility genes conducted by the international consortium for prostate cancer genetics

scientific article

A genetic risk score to personalize prostate cancer screening, applied to population data

scientific article published on 24 June 2020

A meta-analysis of 87,040 individuals identifies 23 new susceptibility loci for prostate cancer

scientific article published on 14 September 2014

A meta-analysis of genome-wide association studies to identify prostate cancer susceptibility loci associated with aggressive and non-aggressive disease

scientific article

Affected relative pairs and simultaneous search for two-locus linkage in the presence of epistasis

scientific article published on 01 July 2007

Analysis of Xq27-28 linkage in the international consortium for prostate cancer genetics (ICPCG) families ⬇️

scientific article published on June 19, 2012

Analysis of the RNASEL gene in familial and sporadic prostate cancer

scientific article published on 17 May 2002

Analysis of the prostate cancer-susceptibility locus HPC20 in 172 families affected by prostate cancer

scientific article

Assessment of genotype imputation methods

scientific article

Association analyses of more than 140,000 men identify 63 new prostate cancer susceptibility loci

scientific article published on 11 June 2018

Association analysis of 9,560 prostate cancer cases from the International Consortium of Prostate Cancer Genetics confirms the role of reported prostate cancer associated SNPs for familial disease

scientific article published on 26 October 2013

Associations of prostate cancer risk variants with disease aggressiveness: results of the NCI-SPORE Genetics Working Group analysis of 18,343 cases

scientific article

Atlas of prostate cancer heritability in European and African-American men pinpoints tissue-specific regulation

scientific article published on 7 April 2016

Author Correction: Association analyses of more than 140,000 men identify 63 new prostate cancer susceptibility loci

scholarly article published in Nature Genetics

Author Correction: Association analyses of more than 140,000 men identify 63 new prostate cancer susceptibility loci

scholarly article published in Nature Genetics

Case-control study of debrisoquine 4-hydroxylase, N-acetyltransferase 2, and apolipoprotein E gene polymorphisms in Parkinson's disease

scientific article published on 01 July 2000

Case-control study of the extended tau gene haplotype in Parkinson's disease

article

Chromosomes 4 and 8 implicated in a genome wide SNP linkage scan of 762 prostate cancer families collected by the ICPCG

scientific article published on 11 July 2011

Common sequence variants on 2p15 and Xp11.22 confer susceptibility to prostate cancer

scientific journal article

Common variants within 6p21.31 locus are associated with chronic lymphocytic leukaemia and, potentially, other non-Hodgkin lymphoma subtypes

scientific article published on October 2012

Common variation at 6p21.31 (BAK1) influences the risk of chronic lymphocytic leukemia

scientific article

Comparison of tagging single-nucleotide polymorphism methods in association analyses

scientific article

Compelling evidence for a prostate cancer gene at 22q12.3 by the International Consortium for Prostate Cancer Genetics

scientific article published on 03 May 2007

Comprehensively evaluating cis-regulatory variation in the human prostate transcriptome by using gene-level allele-specific expression

scientific article published on 14 May 2015

Conference Scene: Lessons learned from the 5th Statistical Analysis Workshop of the Pharmacogenetics Research Network

scientific article published on 01 March 2010

Confirmation of a Positive Association between Prostate Cancer Risk and a Locus at Chromosome 8q24

scientific article published on 01 April 2007

Dense genome-wide SNP linkage scan in 301 hereditary prostate cancer families identifies multiple regions with suggestive evidence for linkage

scientific article published on 27 February 2009

Detecting genomic clustering of risk variants from sequence data: cases versus controls.

scientific article

Efficacy of Bilateral Prophylactic Mastectomy in Women with a Family History of Breast Cancer

article

Efficacy of bilateral prophylactic mastectomy in BRCA1 and BRCA2 gene mutation carriers

scientific article published on 01 November 2001

Efficacy of contralateral prophylactic mastectomy in women with a personal and family history of breast cancer

scientific article published on 01 October 2001

Estimation of genotype relative risks from pedigree data by retrospective likelihoods

scientific article

Evaluation of Genetic Variations in the Androgen and Estrogen Metabolic Pathways as Risk Factors for Sporadic and Familial Prostate Cancer

scientific article published on 01 May 2007

Evidence for Autosomal Dominant Inheritance of Prostate Cancer ⬇️

scientific article published on June 1, 1998

Evidence for a prostate cancer susceptibility locus on the X chromosome.

article

Experimental designs for array comparative genomic hybridization technology

scientific article published on 27 March 2013

Family-based association analysis of 42 hereditary prostate cancer families identifies the Apolipoprotein L3 region on chromosome 22q12 as a risk locus ⬇️

scientific article

Fine mapping of familial prostate cancer families narrows the interval for a susceptibility locus on chromosome 22q12.3 to 1.36 Mb.

scientific article published on 8 December 2007

Fine-mapping of prostate cancer susceptibility loci in a large meta-analysis identifies candidate causal variants.

scientific article published on 11 June 2018

Genome linkage screen for prostate cancer susceptibility loci: results from the Mayo Clinic Familial Prostate Cancer Study

scientific article published on 01 December 2003

Genome-Wide Meta-Analyses of Breast, Ovarian, and Prostate Cancer Association Studies Identify Multiple New Susceptibility Loci Shared by at Least Two Cancer Types

scientific article published in September 2016

Genome-wide association of familial prostate cancer cases identifies evidence for a rare segregating haplotype at 8q24.21.

scientific article published on 4 June 2016

Genome-wide association study of prostate cancer-specific survival

scientific article published on 25 August 2015

Genome-wide linkage analyses of hereditary prostate cancer families with colon cancer provide further evidence for a susceptibility locus on 15q11-q14.

scientific article

Genome-wide linkage analysis of 1,233 prostate cancer pedigrees from the International Consortium for Prostate Cancer Genetics using novel sumLINK and sumLOD analyses

scientific article

Genome-wide linkage scan of prostate cancer Gleason score and confirmation of chromosome 19q

scientific article published on 08 May 2007

Genome-wide transcriptional profiling reveals microRNA-correlated genes and biological processes in human lymphoblastoid cell lines

scientific article

Germline miRNA DNA variants and the risk of colorectal cancer by subtype.

scientific article published on 16 September 2016

Gluthatione-S-transferase P1 polymorphism I105V in familial and sporadic prostate cancer

scientific article published in November 2004

HOXB13 is a susceptibility gene for prostate cancer: results from the International Consortium for Prostate Cancer Genetics (ICPCG).

scientific article published on 12 October 2012

Head trauma preceding PD: a case-control study.

scientific article

How well do whole exome sequencing results correlate with medical findings? A study of 89 Mayo Clinic Biobank samples

scientific article published on 24 July 2015

Hysterectomy, menopause, and estrogen use preceding Parkinson's disease: an exploratory case-control study.

scientific article

Identification of 23 new prostate cancer susceptibility loci using the iCOGS custom genotyping array

scientific article

Identification of candidate genes for prostate cancer-risk SNPs utilizing a normal prostate tissue eQTL data set

scientific article

Identification of novel variants in colorectal cancer families by high-throughput exome sequencing

scientific article published on May 2013

Identification of seven new prostate cancer susceptibility loci through a genome-wide association study

scientific article

Incidence of progressive supranuclear palsy and multiple system atrophy in Olmsted County, Minnesota, 1976 to 1990 ⬇️

scientific article published on November 1, 1997

Incorporating Functional Annotations for Fine-Mapping Causal Variants in a Bayesian Framework Using Summary Statistics.

scientific article

Increased Risk for Cancer in Patients with the Peutz-Jeghers Syndrome

scientific article published on June 1, 1998

Lack of referral bias in genetic studies of prostate cancer

scientific article published in September 2002

Linkage analysis using principal components of gene expression data.

scientific article

Long-term satisfaction and psychological and social function following bilateral prophylactic mastectomy

scientific article published on 01 July 2000

Luteinizing hormone beta polymorphism and risk of familial and sporadic prostate cancer.

scientific article published in June 2003

Microsatellite instability and 8p allelic imbalance in stage B2 and C colorectal cancers

scientific article published on 01 August 1999

Multiple genetic variant association testing by collapsing and kernel methods with pedigree or population structured data

scientific article

Multiple novel prostate cancer predisposition loci confirmed by an international study: the PRACTICAL Consortium

scientific article

Multiple novel prostate cancer susceptibility signals identified by fine-mapping of known risk loci among Europeans

scientific article published on 29 May 2015

Mutational landscape of candidate genes in familial prostate cancer

scientific article

Mutations in CHEK2 associated with prostate cancer risk

scientific article published on 17 January 2003

Network-directed cis-mediator analysis of normal prostate tissue expression profiles reveals downstream regulatory associations of prostate cancer susceptibility loci

scientific article

No association of germline alteration of MSR1 with prostate cancer risk

scientific article (publication date: October 2003)

Nonfatal cancer preceding Parkinson's disease: a case-control study

scientific article published on 01 March 2002

Pathologic characteristics of breast parenchyma in patients with hereditary breast carcinoma, including BRCA1 and BRCA2 mutation carriers

scientific article published on 01 January 2003

Pooled genome linkage scan of aggressive prostate cancer: results from the International Consortium for Prostate Cancer Genetics

scientific article published on 25 August 2006

Post hoc Analysis for Detecting Individual Rare Variant Risk Associations Using Probit Regression Bayesian Variable Selection Methods in Case-Control Sequencing Studies

scientific article published on 17 June 2016

Prediction of individual genetic risk to prostate cancer using a polygenic score

scientific article published on 14 July 2015

Prostate cancer and genetic susceptibility: A genome scan incorporating disease aggressiveness

scientific article published on 01 February 2006

REVEL: An Ensemble Method for Predicting the Pathogenicity of Rare Missense Variants

scientific article published on 21 September 2016

Regression models for linkage heterogeneity applied to familial prostate cancer

scientific article

Risk SNP-Mediated Promoter-Enhancer Switching Drives Prostate Cancer through lncRNA PCAT19

scientific article published on 19 July 2018

Risk of Cognitive Impairment or Dementia in Relatives of Patients With Parkinson Disease

scientific article published on 01 October 2007

Risk of cancer after the diagnosis of Parkinson's disease: a historical cohort study

scientific article published on 01 June 2005

Risk tables for parkinsonism and Parkinson's disease.

scientific article

Role of the Nijmegen breakage syndrome 1 gene in familial and sporadic prostate cancer

scientific article published in May 2006

Searching for epistasis and linkage heterogeneity by correlations of pedigree-specific linkage scores

scientific article published on July 2008

Seven prostate cancer susceptibility loci identified by a multi-stage genome-wide association study

scientific article

Single versus multiple imputation for genotypic data.

scientific article

Smoking, alcohol, and coffee consumption preceding Parkinson's disease: a case-control study.

scientific article published in November 2000

Survival study of Parkinson disease in Olmsted County, Minnesota

scientific article published on 01 January 2003

Targeted sequencing of 36 known or putative colorectal cancer susceptibility genes.

scientific article published on 23 July 2017

The Mayo Clinic family study of Parkinson's disease: study design, instruments, and sample characteristics

scientific article published on 25 January 2005

The genetics of gene expression: comparison of linkage scans using two phenotype normalization methods

scientific article

The neurologic complications of B-cell chronic lymphocytic leukemia

scientific article published on 01 February 1997

Time trends in the incidence of parkinsonism in Olmsted County, Minnesota

scientific article published on 01 August 2001

Truncating variants in p53AIP1 disrupting DNA damage-induced apoptosis are associated with prostate cancer risk

scientific article published in November 2006

Two Common Chromosome 8q24 Variants Are Associated with Increased Risk for Prostate Cancer

scientific article published in April 2007

Validation of a telephone questionnaire for Parkinson's disease.

scientific article published in June 1998

Validation of prostate cancer risk-related loci identified from genome-wide association studies using family-based association analysis: evidence from the International Consortium for Prostate Cancer Genetics (ICPCG)

scientific article published on 25 December 2011

Whole exome sequencing in 75 high-risk families with validation and replication in independent case-control studies identifies TANGO2, OR5H14, and CHAD as new prostate cancer susceptibility genes

scientific article

gsSKAT: Rapid gene set analysis and multiple testing correction for rare-variant association studies using weighted linear kernels

scientific article published on 16 February 2017

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