List of works - Alessandro Senes

A Gly-zipper motif mediates homodimerization of the transmembrane domain of the mitochondrial kinase ADCK3.

scientific article

A frequent, GxxxG-mediated, transmembrane association motif is optimized for the formation of interhelical Cα-H hydrogen bonds.

scientific article published on 25 February 2014

A reversed phase HPLC method for the simultaneous determination of all monosaccharides contained in galactosaminoglycan isomers from human aorta proteoglycans

scientific article published on 01 March 1994

Amide vibrations are delocalized across the hydrophobic interface of a transmembrane helix dimer.

scholarly article

An energy-based conformer library for side chain optimization: improved prediction and adjustable sampling

scientific article

BH3-in-groove dimerization initiates and helix 9 dimerization expands Bax pore assembly in membranes

scientific article

Backbone dependency further improves side chain prediction efficiency in the Energy-based Conformer Library (bEBL).

scientific article

Combination of Cα-H Hydrogen Bonds and van der Waals Packing Modulates the Stability of GxxxG-Mediated Dimers in Membranes.

scientific article published on 13 October 2017

Computational design of membrane proteins

scientific article published on 15 July 2011

Consensus motif for integrin transmembrane helix association

scientific article

De novo design and molecular assembly of a transmembrane diporphyrin-binding protein complex.

scientific article published on November 2010

Energy and electron transfer in enhanced two-photon-absorbing systems with triplet cores

scientific article

Ez, a Depth-dependent Potential for Assessing the Energies of Insertion of Amino Acid Side-chains into Membranes: Derivation and Applications to Determining the Orientation of Transmembrane and Interfacial Helices

article

Fluorophores, environments, and quantification techniques in the analysis of transmembrane helix interaction using FRET

scientific article

Inside-out Ca(2+) signalling prompted by STIM1 conformational switch.

scientific article

Measurement of transmembrane peptide interactions in liposomes using Förster resonance energy transfer (FRET).

scientific article published in January 2013

Membrane protein folding: beyond the two stage model.

scientific article

Ptc7p Dephosphorylates Select Mitochondrial Proteins to Enhance Metabolic Function.

scientific article published on January 2017

Screening for transmembrane association in divisome proteins using TOXGREEN, a high-throughput variant of the TOXCAT assay

scientific article published on 21 July 2016

Statistical analysis of amino acid patterns in transmembrane helices: the GxxxG motif occurs frequently and in association with beta-branched residues at neighboring positions.

scientific article published in February 2000

Structural Organization of FtsB, a Transmembrane Protein of the Bacterial Divisome

scientific article

Structural informatics, modeling, and design with an open‐source Molecular Software Library (MSL) ⬇️

scientific article published on May 8, 2012

The FtsLB sub-complex of the bacterial divisome is tetramer with an uninterrupted FtsL helix linking the transmembrane and periplasmic regions

scientific article published on 12 December 2017

The coiled-coil domain of Escherichia coli FtsLB is a structurally detuned element critical for modulating its activation in bacterial cell division

scientific article published in 2022

The cytokinin oxidase/dehydrogenase CKX1 is a membrane-bound protein requiring homooligomerization in the endoplasmic reticulum for its cellular activity.

scientific article published on 4 January 2018

The oligomeric states of the purified sigma-1 receptor are stabilized by ligands

scientific article

The transmembrane domains of the bacterial cell division proteins FtsB and FtsL form a stable high-order oligomer.

scientific article published on 18 October 2013

Toward high-resolution computational design of the structure and function of helical membrane proteins

scientific article published on June 2016

Using alpha-helical coiled-coils to design nanostructured metalloporphyrin arrays

scientific article published on 19 August 2008

[Characterization of plasma glycosaminoglycans in hemodialysis patients]

scientific article published on 01 December 1992

[Separation and quantification of glycosaminoglycans using HPLC]

scientific article

[Study of the interaction between plasma proteoglycans and LDL by means of fluorescence spectroscopy]

scientific article published on 01 November 1992

List of works by Alessandro Senes

A Gly-zipper motif mediates homodimerization of the transmembrane domain of the mitochondrial kinase ADCK3.

A frequent, GxxxG-mediated, transmembrane association motif is optimized for the formation of interhelical Cα-H hydrogen bonds.

A reversed phase HPLC method for the simultaneous determination of all monosaccharides contained in galactosaminoglycan isomers from human aorta proteoglycans

Amide vibrations are delocalized across the hydrophobic interface of a transmembrane helix dimer.

An energy-based conformer library for side chain optimization: improved prediction and adjustable sampling

BH3-in-groove dimerization initiates and helix 9 dimerization expands Bax pore assembly in membranes

Backbone dependency further improves side chain prediction efficiency in the Energy-based Conformer Library (bEBL).

Combination of Cα-H Hydrogen Bonds and van der Waals Packing Modulates the Stability of GxxxG-Mediated Dimers in Membranes.

Computational design of membrane proteins

Consensus motif for integrin transmembrane helix association

De novo design and molecular assembly of a transmembrane diporphyrin-binding protein complex.

Energy and electron transfer in enhanced two-photon-absorbing systems with triplet cores

Ez, a Depth-dependent Potential for Assessing the Energies of Insertion of Amino Acid Side-chains into Membranes: Derivation and Applications to Determining the Orientation of Transmembrane and Interfacial Helices

Fluorophores, environments, and quantification techniques in the analysis of transmembrane helix interaction using FRET

Inside-out Ca(2+) signalling prompted by STIM1 conformational switch.

Measurement of transmembrane peptide interactions in liposomes using Förster resonance energy transfer (FRET).

Membrane protein folding: beyond the two stage model.

Ptc7p Dephosphorylates Select Mitochondrial Proteins to Enhance Metabolic Function.

Screening for transmembrane association in divisome proteins using TOXGREEN, a high-throughput variant of the TOXCAT assay

Statistical analysis of amino acid patterns in transmembrane helices: the GxxxG motif occurs frequently and in association with beta-branched residues at neighboring positions.

Structural Organization of FtsB, a Transmembrane Protein of the Bacterial Divisome

Structural informatics, modeling, and design with an open‐source Molecular Software Library (MSL) ⬇️

The FtsLB sub-complex of the bacterial divisome is tetramer with an uninterrupted FtsL helix linking the transmembrane and periplasmic regions

The coiled-coil domain of Escherichia coli FtsLB is a structurally detuned element critical for modulating its activation in bacterial cell division

The cytokinin oxidase/dehydrogenase CKX1 is a membrane-bound protein requiring homooligomerization in the endoplasmic reticulum for its cellular activity.

The oligomeric states of the purified sigma-1 receptor are stabilized by ligands

The transmembrane domains of the bacterial cell division proteins FtsB and FtsL form a stable high-order oligomer.

Toward high-resolution computational design of the structure and function of helical membrane proteins

Using alpha-helical coiled-coils to design nanostructured metalloporphyrin arrays

[Characterization of plasma glycosaminoglycans in hemodialysis patients]

[Separation and quantification of glycosaminoglycans using HPLC]

[Study of the interaction between plasma proteoglycans and LDL by means of fluorescence spectroscopy]