List of works - Enrique Merino

A Bacillus subtilis gene of previously unknown function, yhaG, is translationally regulated by tryptophan-activated TRAP and appears to be involved in tryptophan transport.

scientific article

A Codon Deletion at the Beginning of Green Fluorescent Protein Genes Enhances Protein Expression

scientific article published on 8 November 2016

A large number of novel Ergtoxin-like genes and ERG K+-channels blocking peptides from scorpions of the genus Centruroides.

scientific article published in December 2002

A novel class of peptide found in scorpion venom with neurodepressant effects in peripheral and central nervous system of the rat.

scientific article

Analysis of Spo0M function in Bacillus subtilis

scientific article

Analysis of sequencing strategies and tools for taxonomic annotation: Defining standards for progressive metagenomics

scientific article published in Scientific Reports

Bacterial Diversity and the Geochemical Landscape in the Southwestern Gulf of Mexico

scientific article published on 18 October 2018

Carbon regulation and the role in nature of the Escherichia coli penicillin acylase (pac) gene.

scientific article published in August 1992

Circulating levels of miR-150 are associated with poorer outcomes of A/H1N1 infection.

scientific article

Cloning and expression of the Entamoeba histolytica ERD2 gene ⬇️

scientific article published on May 1, 1998

Comparison of tryptophan biosynthetic operon regulation in different Gram-positive bacterial species

scientific article published on 06 June 2007

Complete Genome Sequence of Helicobacter pylori Strain 29CaP Isolated from a Mexican Patient with Gastric Cancer

scientific article

Complete Genome Sequence of Helicobacter pylori Strain 7C Isolated from a Mexican Patient with Chronic Gastritis.

scientific article published on 7 January 2016

Conservation of DNA curvature signals in regulatory regions of prokaryotic genes

scientific article published on December 2003

Conserved regulatory motifs in bacteria: riboswitches and beyond

scientific article published on 01 October 2004

Construction of protein overproducer strains in Bacillus subtilis by an integrative approach

scientific article published on 01 January 2001

Down‐regulation of PvTRE1 enhances nodule biomass and bacteroid number in the common bean ⬇️

scientific article published on November 1, 2012

Effect of genomic distance on coexpression of coregulated genes in E. coli.

scientific article

Effects of the global regulator CsrA on the BarA/UvrY two-component signaling system

scientific article

Elucidating metabolic pathways and digging for genes of unknown function in microbial communities: the riboswitch approach ⬇️

scientific article published on 01 July 2012

Epigenetics knocks on synthetic biology's door.

scientific article published on 11 August 2016

Extensive Identification of Bacterial Riboflavin Transporters and Their Distribution across Bacterial Species.

scientific article published on 4 May 2015

Functional interaction and structural characteristics of unique components of Helicobacter pylori T4SS.

scientific article published on 4 May 2017

GSEL version 2, an online genome-wide query system of operon organization and regulatory sequence elements of Geobacter sulfurreducens.

scientific article published in October 2009

GeConT 2: gene context analysis for orthologous proteins, conserved domains and metabolic pathways.

scientific article published on 29 May 2008

GeConT: gene context analysis.

scientific article

Genome analysis of Escherichia coli promoter sequences evidences that DNA static curvature plays a more important role in gene transcription than has previously been anticipated

scientific article published on 18 January 2006

High accuracy operon prediction method based on STRING database scores.

scientific article

IRES-dependent translated genes in fungi: computational prediction, phylogenetic conservation and functional association.

scientific article published on 15 December 2015

Lessons from the modular organization of the transcriptional regulatory network of Bacillus subtilis.

scientific article

Molecular and structural considerations of TF-DNA binding for the generation of biologically meaningful and accurate phylogenetic footprinting analysis: the LysR-type transcriptional regulator family as a study model.

scientific article

New insights into regulation of the tryptophan biosynthetic operon in Gram-positive bacteria.

scientific article published in August 2005

New insights into the regulatory networks of paralogous genes in bacteria.

scientific article published on 22 October 2009

New insights into the role of sigma factor RpoS as revealed in escherichia coli strains lacking the phosphoenolpyruvate:carbohydrate phosphotransferase system.

scientific article published on 15 October 2007

Novel interactions between K+ channels and scorpion toxins

scientific article

Operon-mapper: a web server for precise operon identification in bacterial and archaeal genomes

scientific article published on 01 December 2018

Peptides and genes coding for scorpion toxins that affect ion-channels.

scientific article

ProOpDB: Prokaryotic Operon DataBase

scientific article

RNA localization is a key determinant of neurite-enriched proteome

scientific article published on 19 September 2017

Regulation of Pseudomonas aeruginosa virulence factors by two novel RNA thermometers.

scientific article

RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation.

scientific article

Relationship between whole proteome aminoacid composition and static DNA curvature.

scientific article published in January 2000

Repetitive extragenic palindromic (REP) sequences in the Escherichia coli gdhA gene

scientific article published on 01 January 1985

RibEx: a web server for locating riboswitches and other conserved bacterial regulatory elements

scientific article

The DNA static curvature has a role in the regulation of the ompS1 porin gene in Salmonella enterica serovar Typhi.

scientific article published on 30 April 2009

The effect of the genomic GC content bias of prokaryotic organisms on the secondary structures of their proteins

scientific article published in 2023

The genomic sequence of Exiguobacterium chiriqhucha str. N139 reveals a species that thrives in cold waters and extreme environmental conditions

scientific article published on 19 April 2017

The ribonucleoside diphosphate reductase gene (nrdA) of Escherichia coli carries a repetitive extragenic palindromic (REP) sequence in its 3' structural terminus.

scientific article published in June 1989

Transcription attenuation: a highly conserved regulatory strategy used by bacteria

scientific article published on 01 May 2005

trp RNA-binding attenuation protein (TRAP)-trp leader RNA interactions mediate translational as well as transcriptional regulation of the Bacillus subtilis trp operon.

scientific article published on November 1995

List of works by Enrique Merino

A Bacillus subtilis gene of previously unknown function, yhaG, is translationally regulated by tryptophan-activated TRAP and appears to be involved in tryptophan transport.

A Codon Deletion at the Beginning of Green Fluorescent Protein Genes Enhances Protein Expression

A large number of novel Ergtoxin-like genes and ERG K+-channels blocking peptides from scorpions of the genus Centruroides.

A novel class of peptide found in scorpion venom with neurodepressant effects in peripheral and central nervous system of the rat.

Analysis of Spo0M function in Bacillus subtilis

Analysis of sequencing strategies and tools for taxonomic annotation: Defining standards for progressive metagenomics

Bacterial Diversity and the Geochemical Landscape in the Southwestern Gulf of Mexico

Carbon regulation and the role in nature of the Escherichia coli penicillin acylase (pac) gene.

Circulating levels of miR-150 are associated with poorer outcomes of A/H1N1 infection.

Cloning and expression of the Entamoeba histolytica ERD2 gene ⬇️

Comparison of tryptophan biosynthetic operon regulation in different Gram-positive bacterial species

Complete Genome Sequence of Helicobacter pylori Strain 29CaP Isolated from a Mexican Patient with Gastric Cancer

Complete Genome Sequence of Helicobacter pylori Strain 7C Isolated from a Mexican Patient with Chronic Gastritis.

Conservation of DNA curvature signals in regulatory regions of prokaryotic genes

Conserved regulatory motifs in bacteria: riboswitches and beyond

Construction of protein overproducer strains in Bacillus subtilis by an integrative approach

Down‐regulation of PvTRE1 enhances nodule biomass and bacteroid number in the common bean ⬇️

Effect of genomic distance on coexpression of coregulated genes in E. coli.

Effects of the global regulator CsrA on the BarA/UvrY two-component signaling system

Elucidating metabolic pathways and digging for genes of unknown function in microbial communities: the riboswitch approach ⬇️

Epigenetics knocks on synthetic biology's door.

Extensive Identification of Bacterial Riboflavin Transporters and Their Distribution across Bacterial Species.

Functional interaction and structural characteristics of unique components of Helicobacter pylori T4SS.

GSEL version 2, an online genome-wide query system of operon organization and regulatory sequence elements of Geobacter sulfurreducens.

GeConT 2: gene context analysis for orthologous proteins, conserved domains and metabolic pathways.

GeConT: gene context analysis.

Genome analysis of Escherichia coli promoter sequences evidences that DNA static curvature plays a more important role in gene transcription than has previously been anticipated

High accuracy operon prediction method based on STRING database scores.

IRES-dependent translated genes in fungi: computational prediction, phylogenetic conservation and functional association.

Lessons from the modular organization of the transcriptional regulatory network of Bacillus subtilis.

Molecular and structural considerations of TF-DNA binding for the generation of biologically meaningful and accurate phylogenetic footprinting analysis: the LysR-type transcriptional regulator family as a study model.

New insights into regulation of the tryptophan biosynthetic operon in Gram-positive bacteria.

New insights into the regulatory networks of paralogous genes in bacteria.

New insights into the role of sigma factor RpoS as revealed in escherichia coli strains lacking the phosphoenolpyruvate:carbohydrate phosphotransferase system.

Novel interactions between K+ channels and scorpion toxins

Operon-mapper: a web server for precise operon identification in bacterial and archaeal genomes

Peptides and genes coding for scorpion toxins that affect ion-channels.

ProOpDB: Prokaryotic Operon DataBase

RNA localization is a key determinant of neurite-enriched proteome

Regulation of Pseudomonas aeruginosa virulence factors by two novel RNA thermometers.

RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation.

Relationship between whole proteome aminoacid composition and static DNA curvature.

Repetitive extragenic palindromic (REP) sequences in the Escherichia coli gdhA gene

RibEx: a web server for locating riboswitches and other conserved bacterial regulatory elements

The DNA static curvature has a role in the regulation of the ompS1 porin gene in Salmonella enterica serovar Typhi.

The effect of the genomic GC content bias of prokaryotic organisms on the secondary structures of their proteins

The genomic sequence of Exiguobacterium chiriqhucha str. N139 reveals a species that thrives in cold waters and extreme environmental conditions

The ribonucleoside diphosphate reductase gene (nrdA) of Escherichia coli carries a repetitive extragenic palindromic (REP) sequence in its 3' structural terminus.

Transcription attenuation: a highly conserved regulatory strategy used by bacteria

trp RNA-binding attenuation protein (TRAP)-trp leader RNA interactions mediate translational as well as transcriptional regulation of the Bacillus subtilis trp operon.