List of works - Mehmet Gönen

A Community Challenge for Inferring Genetic Predictors of Gene Essentialities through Analysis of a Functional Screen of Cancer Cell Lines

scientific article published on 3 October 2017

A community effort to assess and improve drug sensitivity prediction algorithms.

scientific article

Bayesian supervised dimensionality reduction.

scientific article published in December 2013

Coupled dimensionality reduction and classification for supervised and semi-supervised multilabel learning

scientific article published on March 2014

Cytokine response in crimean-congo hemorrhagic fever virus infection.

scientific article published on 26 May 2017

DREAMTools: a Python package for scoring collaborative challenges.

scientific article

Discriminating early- and late-stage cancers using multiple kernel learning on gene sets.

scientific article published in July 2018

Drug susceptibility prediction against a panel of drugs using kernelized Bayesian multitask learning

scientific article

Identification of SERPINE1 as a Regulator of Glioblastoma Cell Dispersal with Transcriptome Profiling

scientific article published on 25 October 2019

Impact of the ST101 clone on fatality among patients with colistin-resistant Klebsiella pneumoniae infection.

scientific article published on 3 February 2018

Integrating gene set analysis and nonlinear predictive modeling of disease phenotypes using a Bayesian multitask formulation.

scientific article

Integrative and personalized QSAR analysis in cancer by kernelized Bayesian matrix factorization

scientific article

Machine learning integration for predicting the effect of single amino acid substitutions on protein stability

scientific article

Modeling gene-wise dependencies improves the identification of drug response biomarkers in cancer studies

scientific article published on 12 January 2017

Pan-cancer transcriptional signatures predictive of oncogenic mutations reveal that Fbw7 regulates cancer cell oxidative metabolism

scientific article published on 07 May 2018

Predicting drug-target interactions from chemical and genomic kernels using Bayesian matrix factorization.

scientific article published on 23 June 2012

Protein dynamics analysis reveals that missense mutations in cancer-related genes appear frequently on hinge-neighboring residues

article

Spatiotemporal prediction of infectious diseases using structured Gaussian processes with application to Crimean-Congo hemorrhagic fever

Systematic Review and Meta-analysis of Postexposure Prophylaxis for Crimean-Congo Hemorrhagic Fever Virus among Healthcare Workers

article

Ultrasensitive proteomic quantitation of cellular signaling by digitized nanoparticle-protein counting

scientific article published on 20 June 2016

List of works by Mehmet Gönen

A Community Challenge for Inferring Genetic Predictors of Gene Essentialities through Analysis of a Functional Screen of Cancer Cell Lines

A community effort to assess and improve drug sensitivity prediction algorithms.

Bayesian supervised dimensionality reduction.

Coupled dimensionality reduction and classification for supervised and semi-supervised multilabel learning

Cytokine response in crimean-congo hemorrhagic fever virus infection.

DREAMTools: a Python package for scoring collaborative challenges.

Discriminating early- and late-stage cancers using multiple kernel learning on gene sets.

Drug susceptibility prediction against a panel of drugs using kernelized Bayesian multitask learning

Identification of SERPINE1 as a Regulator of Glioblastoma Cell Dispersal with Transcriptome Profiling

Impact of the ST101 clone on fatality among patients with colistin-resistant Klebsiella pneumoniae infection.

Integrating gene set analysis and nonlinear predictive modeling of disease phenotypes using a Bayesian multitask formulation.

Integrative and personalized QSAR analysis in cancer by kernelized Bayesian matrix factorization

Machine learning integration for predicting the effect of single amino acid substitutions on protein stability

Modeling gene-wise dependencies improves the identification of drug response biomarkers in cancer studies

Pan-cancer transcriptional signatures predictive of oncogenic mutations reveal that Fbw7 regulates cancer cell oxidative metabolism

Predicting drug-target interactions from chemical and genomic kernels using Bayesian matrix factorization.

Protein dynamics analysis reveals that missense mutations in cancer-related genes appear frequently on hinge-neighboring residues

Spatiotemporal prediction of infectious diseases using structured Gaussian processes with application to Crimean-Congo hemorrhagic fever

Systematic Review and Meta-analysis of Postexposure Prophylaxis for Crimean-Congo Hemorrhagic Fever Virus among Healthcare Workers

Ultrasensitive proteomic quantitation of cellular signaling by digitized nanoparticle-protein counting