List of works - Fiona Achcar

A Boolean probabilistic model of metabolic adaptation to oxygen in relation to iron homeostasis and oxidative stress

scientific article

AutoClass@IJM: a powerful tool for Bayesian classification of heterogeneous data in biology

scientific article

Deletion of transketolase triggers a stringent metabolic response in promastigotes and loss of virulence in amastigotes of Leishmania mexicana.

scientific article

Dynamic Modelling under Uncertainty: The Case of Trypanosoma brucei Energy Metabolism ⬇️

scientific article published on January 19, 2012

Explicit consideration of topological and parameter uncertainty gives new insights into a well-established model of glycolysis

scientific article published on 19 August 2013

Handling uncertainty in dynamic models: the pentose phosphate pathway in Trypanosoma brucei

scientific article (publication date: 2013)

LC-MS-based absolute metabolite quantification: application to metabolic flux measurement in trypanosomes

scientific article

Mapping the metabolism of five amino acids in bloodstream form using U-C-labelled substrates and LC-MS

scientific article published on 17 May 2019

Modeling Challenges in the Synthetic Biology of Secondary Metabolism ⬇️

scientific article published on May 20, 2013

Probing the metabolic network in bloodstream-form Trypanosoma brucei using untargeted metabolomics with stable isotope labelled glucose

scientific article

Running on Empty: A Metabolomics Approach to Investigating Changing Energy Metabolism during Fasted Exercise and Rest

scientific article published on 08 October 2020

Suramin exposure alters cellular metabolism and mitochondrial energy production in African trypanosomes

scientific article published on 30 April 2020

The silicon trypanosome: a test case of iterative model extension in systems biology

scientific article published on January 2014

TrypanoCyc: a community-led biochemical pathways database for Trypanosoma brucei

scientific article

Trypanosoma brucei: meet the system

scientific article published on 16 July 2014

mzMatch-ISO: an R tool for the annotation and relative quantification of isotope-labelled mass spectrometry data

scientific article

List of works by Fiona Achcar

A Boolean probabilistic model of metabolic adaptation to oxygen in relation to iron homeostasis and oxidative stress

AutoClass@IJM: a powerful tool for Bayesian classification of heterogeneous data in biology

Deletion of transketolase triggers a stringent metabolic response in promastigotes and loss of virulence in amastigotes of Leishmania mexicana.

Dynamic Modelling under Uncertainty: The Case of Trypanosoma brucei Energy Metabolism ⬇️

Explicit consideration of topological and parameter uncertainty gives new insights into a well-established model of glycolysis

Handling uncertainty in dynamic models: the pentose phosphate pathway in Trypanosoma brucei

LC-MS-based absolute metabolite quantification: application to metabolic flux measurement in trypanosomes

Mapping the metabolism of five amino acids in bloodstream form using U-C-labelled substrates and LC-MS

Modeling Challenges in the Synthetic Biology of Secondary Metabolism ⬇️

Probing the metabolic network in bloodstream-form Trypanosoma brucei using untargeted metabolomics with stable isotope labelled glucose

Running on Empty: A Metabolomics Approach to Investigating Changing Energy Metabolism during Fasted Exercise and Rest

Suramin exposure alters cellular metabolism and mitochondrial energy production in African trypanosomes

The silicon trypanosome: a test case of iterative model extension in systems biology

TrypanoCyc: a community-led biochemical pathways database for Trypanosoma brucei

Trypanosoma brucei: meet the system

mzMatch-ISO: an R tool for the annotation and relative quantification of isotope-labelled mass spectrometry data