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List of works by Annika Jacobsen

A Generic Workflow for the Data FAIRification Process

article published in 2019

A catalogue of 863 Rett-syndrome-causing MECP2 mutations and lessons learned from data integration

scientific article published on 15 January 2021

Applying the FAIR Data Principles to the Registry of Vascular Anomalies (VASCA)

scientific article published on 01 June 2020

Applying the FAIR principles to data in a hospital: challenges and opportunities in a pandemic

scientific article published on 25 April 2022

Aurora kinase A (AURKA) interaction with Wnt and Ras-MAPK signalling pathways in colorectal cancer.

scientific article

BioASF: a framework for automatically generating executable pathway models specified in BioPAX.

scientific article

Construction and Experimental Validation of a Petri Net Model of Wnt/β-Catenin Signaling.

scientific article

De-novo FAIRification via an Electronic Data Capture system by automated transformation of filled electronic Case Report Forms into machine-readable data

scientific article published on 26 August 2021

FAIR Convergence Matrix: Optimizing the Reuse of Existing FAIR-Related Resources

FAIR Principles: Interpretations and Implementation Considerations

scholarly article

Highlights from the ISCB Student Council Symposia in 2016.

scientific article published on 15 December 2016

Highlights from the tenth ISCB Student Council Symposium 2014.

scientific article published on 28 January 2015

MECP2 variation in Rett syndrome - an overview of current coverage of genetic and phenotype data within existing databases

scholarly article from 2018

Recommendations for Improving the Quality of Rare Disease Registries

Semantic modelling of common data elements for rare disease registries, and a prototype workflow for their deployment over registry data

scientific article published on 15 March 2022

The FAIR Principles: First Generation Implementation Choices and Challenges

The Salmonella enterica pan-genome

scientific article published on 4 June 2011

The ability of transcription factors to differentially regulate gene expression is a crucial component of the mechanism underlying inversion, a frequently observed genetic interaction pattern.

scientific article published on 13 May 2019

The de novo FAIRification process of a registry for vascular anomalies

scientific article published on 04 September 2021

The use of Foundational Ontologies in Bioinformatics ⬇️

Wikidata as an intuitive resource towards semantic data modeling in data FAIRification ⬇️

scholarly article by Annika Jacobsen published in December 2018

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