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List of works by Noha H Youssef

A fast and reliable procedure for spore collection from anaerobic fungi: Application for RNA uptake and long-term storage of isolates.

scientific article

A multifunctional GH39 glycoside hydrolase from the anaerobic gut fungus Orpinomyces sp. strain C1A

scientific article

Anaerobic fungi (phylum Neocallimastigomycota): advances in understanding their taxonomy, life cycle, ecology, role and biotechnological potential

scientific article

Anaerobic fungi in the tortoise alimentary tract illuminate early stages of host-fungal symbiosis and Neocallimastigomycota evolution

scientific article published in 2024

Anaeromyces contortus, sp. nov., a new anaerobic gut fungal species (Neocallimastigomycota) isolated from the feces of cow and goat

scientific article published on 01 May 2018

Assessing anaerobic gut fungal diversity in herbivores using D1/D2 large ribosomal subunit sequencing and multi-year isolation

scientific article published on 12 July 2020

Assessing the global phylum level diversity within the bacterial domain: A review

scientific article

Assessment of the diversity, abundance, and ecological distribution of members of candidate division SR1 reveals a high level of phylogenetic diversity but limited morphotypic diversity

scientific article

Basis for formulating biosurfactant mixtures to achieve ultra low interfacial tension values against hydrocarbons

scientific article published on 03 May 2007

Comparison of methods to detect biosurfactant production by diverse microorganisms

scientific article published on 01 March 2004

Comparison of species richness estimates obtained using nearly complete fragments and simulated pyrosequencing-generated fragments in 16S rRNA gene-based environmental surveys

scientific article published on 26 June 2009

Defined enzyme cocktail from the anaerobic fungus Orpinomyces sp. strain C1A effectively releases sugars from pretreated corn stover and switchgrass

scientific article published on 06 July 2016

Diversity rankings among bacterial lineages in soil

scientific article

Draft Genome Sequence of the Environmental Isolate Chryseobacterium sp. Hurlbut01.

scientific article published on 17 September 2015

Draft Genome Sequences of Five Pseudomonas aeruginosa Clinical Strains Isolated from Sputum Samples from Cystic Fibrosis Patients.

scientific article

Draft Genome of the Arthrobacter sp. Strain Edens01.

scientific article published on 17 December 2015

Draft genome sequence and detailed analysis of Pantoea eucrina strain Russ and implication for opportunistic pathogenesis.

scientific article published on 20 September 2016

Draft genome sequence of Microbacterium oleivorans strain Wellendorf implicates heterotrophic versatility and bioremediation potential.

scientific article

Draft genome sequence of Micrococcus luteus strain O'Kane implicates metabolic versatility and the potential to degrade polyhydroxybutyrates

scientific article

Draft genome sequence of Pseudomonas moraviensis strain Devor implicates metabolic versatility and bioremediation potential

scientific article

Draft genome sequence of Staphylococcus hominis strain Hudgins isolated from human skin implicates metabolic versatility and several virulence determinants

scientific article (publication date: December 2016)

Evaluating the utility of hydrothermolysis pretreatment approaches in enhancing lignocellulosic biomass degradation by the anaerobic fungus Orpinomyces sp. strain C1A.

scientific article published on 24 June 2014

Feramyces austinii, gen. nov., sp. nov., an anaerobic gut fungus from rumen and fecal samples of wild Barbary sheep and fallow deer

scientific article published on 01 May 2018

Fine-scale bacterial beta diversity within a complex ecosystem (Zodletone Spring, OK, USA): the role of the rare biosphere

scientific article

Genomic Analysis of the Yet-Uncultured Binatota Reveals Broad Methylotrophic, Alkane-Degradation, and Pigment Production Capacities

scientific article published on 18 May 2021

Genomic Characterization of Candidate Division LCP-89 Reveals an Atypical Cell Wall Structure, Microcompartment Production, and Dual Respiratory and Fermentative Capacities

scientific article published on 02 May 2019

Global Distribution Patterns and Pangenomic Diversity of the Candidate Phylum "Latescibacteria" (WS3).

scientific article

Global patterns of abundance, diversity and community structure of the Aminicenantes (candidate phylum OP8)

scientific article

Importance of 3-hydroxy fatty acid composition of lipopeptides for biosurfactant activity

scientific article published on December 2005

Importance of the long-chain fatty acid beta-hydroxylating cytochrome P450 enzyme YbdT for lipopeptide biosynthesis in Bacillus subtilis strain OKB105

scientific article (publication date: 2011)

In Silico Analysis of the Metabolic Potential and Niche Specialization of Candidate Phylum "Latescibacteria" (WS3).

scientific article published on 3 June 2015

In situ biosurfactant production by Bacillus strains injected into a limestone petroleum reservoir.

scientific article published on 15 December 2006

Insights into the Utility of the Focal Adhesion Scaffolding Proteins in the Anaerobic Fungus Orpinomyces sp. C1A

scientific article

Insights into the metabolism, lifestyle and putative evolutionary history of the novel archaeal phylum 'Diapherotrites'

scientific article

Methylotrophy, alkane-degradation, and pigment production as defining features of the globally distributed yet-uncultured phylum Binatota

scientific article published on 2 October 2020

Microbial Diversity and Sulfur Cycling in an Early Earth Analogue: From Ancient Novelty to Modern Commonality

scientific article published on 08 March 2022

Microbial communities mediating algal detritus turnover under anaerobic conditions

scientific article published on 10 January 2017

Microbial community structure analysis of a benzoate-degrading halophilic archaeal enrichment.

scientific article

Microbial processes in oil fields: culprits, problems, and opportunities.

scientific article published on January 2009

Novel High-Rank Phylogenetic Lineages within a Sulfur Spring (Zodletone Spring, Oklahoma), Revealed Using a Combined Pyrosequencing-Sanger Approach ⬇️

scientific article published on February 3, 2012

Novelty and uniqueness patterns of rare members of the soil biosphere

scientific article

Patterns and determinants of halophilic archaea (class halobacteria) diversity in tunisian endorheic salt lakes and sebkhet systems.

scientific article published on 24 April 2015

Paucimyces polynucleatus gen. nov, sp. nov., a novel polycentric genus of anaerobic gut fungi from the faeces of a wild blackbuck antelope

scientific article published in 2021

Phylogenetic and metabolic diversity of Planctomycetes from anaerobic, sulfide- and sulfur-rich Zodletone Spring, Oklahoma

scientific article

Phylogenetic diversities and community structure of members of the extremely halophilic Archaea (order Halobacteriales) in multiple saline sediment habitats

scientific article

Phylogenetic diversity and community structure of anaerobic gut fungi (phylum Neocallimastigomycota) in ruminant and non-ruminant herbivores

scientific article

Response of the rare biosphere to environmental stressors in a highly diverse ecosystem (Zodletone spring, OK, USA).

scientific article

Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes ⬇️

scientific article published on 01 January 2019

Rhamnolipid biosurfactant mixtures for environmental remediation.

scientific article published on 4 November 2007

Seven new Neocallimastigomycota genera from wild, zoo-housed, and domesticated herbivores greatly expand the taxonomic diversity of the phylum

scientific article published on 14 February 2020

Spatiotemporal analysis of microbial community dynamics during seasonal stratification events in a freshwater lake (Grand Lake, OK, USA).

scientific article

Species richness in soil bacterial communities: a proposed approach to overcome sample size bias

scientific article

Survival of the anaerobic fungus Orpinomyces sp. strain C1A after prolonged air exposure.

scientific article published on 4 November 2014

Taxonomy of the anaerobic gut fungi (Neocallimastigomycota): a review of classification criteria and description of current taxa

scientific article published in 2022

The Draft Genome Sequence of Xanthomonas sp. Strain Mitacek01 Expands the Pangenome of a Genus of Plant Pathogens.

scientific article published on 10 December 2015

The Wood-Ljungdahl pathway as a key component of metabolic versatility in candidate phylum Bipolaricaulota (Acetothermia, OP1)

scientific article published on 02 April 2019

The genome of the anaerobic fungus Orpinomyces sp. strain C1A reveals the unique evolutionary history of a remarkable plant biomass degrader

scientific article (publication date: August 2013)

Transcriptomic analysis of lignocellulosic biomass degradation by the anaerobic fungal isolate Orpinomyces sp. strain C1A.

scientific article published on 8 December 2015

Trehalose/2-sulfotrehalose biosynthesis and glycine-betaine uptake are widely spread mechanisms for osmoadaptation in the Halobacteriales

scientific article published on 19 September 2013

Utilizing Anaerobic Fungi for Two-stage Sugar Extraction and Biofuel Production from Lignocellulosic Biomass

scientific article published on 11 April 2017

Where less may be more: how the rare biosphere pulls ecosystems strings

scientific article

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