List of works - Ino de Bruijn

Binning metagenomic contigs by coverage and composition

scientific article

Comprehensive Analysis of Alternative Splicing Across Tumors from 8,705 Patients

article

Comprehensive Characterization of Cancer Driver Genes and Mutations

article

Diverse BRCA1 and BRCA2 Reversion Mutations in Circulating Cell-Free DNA of Therapy-Resistant Breast or Ovarian Cancer.

scientific article

Genetic Heterogeneity in Therapy-Naïve Synchronous Primary Breast Cancers and Their Metastases

scientific article published on 28 March 2017

Genome Nexus: A Comprehensive Resource for the Annotation and Interpretation of Genomic Variants in Cancer

scientific article published in 2022

Genomic and transcriptomic heterogeneity in metaplastic carcinomas of the breast

scientific article published in December 2017

High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants

scientific article published on 25 November 2019

Integration and Analysis of CPTAC Proteomics Data in the Context of Cancer Genomics in the cBioPortal

scientific article published on 15 July 2019

Loss-of-function mutations in ATP6AP1 and ATP6AP2 in granular cell tumors

scientific article published in Nature Communications

Massively parallel sequencing of phyllodes tumours of the breast reveals actionable mutations, and TERT promoter hotspot mutations and TERT gene amplification as likely drivers of progression

scientific article published on 17 November 2015

Multiomic Integration of Public Oncology Databases in Bioconductor

scientific article published on 01 October 2020

Reconstructing a hydrogen-driven microbial metabolic network in Opalinus Clay rock

scientific article published on 14 October 2016

The Cancer Genome Atlas Comprehensive Molecular Characterization of Renal Cell Carcinoma

article

The Fennoscandian Shield deep terrestrial virosphere suggests slow motion 'boom and burst' cycles

scientific article published on 08 March 2021

The evolution of RET inhibitor resistance in RET-driven lung and thyroid cancers

scientific article published on 18 March 2022

List of works by Ino de Bruijn

Binning metagenomic contigs by coverage and composition

Comprehensive Analysis of Alternative Splicing Across Tumors from 8,705 Patients

Comprehensive Characterization of Cancer Driver Genes and Mutations

Diverse BRCA1 and BRCA2 Reversion Mutations in Circulating Cell-Free DNA of Therapy-Resistant Breast or Ovarian Cancer.

Genetic Heterogeneity in Therapy-Naïve Synchronous Primary Breast Cancers and Their Metastases

Genome Nexus: A Comprehensive Resource for the Annotation and Interpretation of Genomic Variants in Cancer

Genomic and transcriptomic heterogeneity in metaplastic carcinomas of the breast

High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants

Integration and Analysis of CPTAC Proteomics Data in the Context of Cancer Genomics in the cBioPortal

Loss-of-function mutations in ATP6AP1 and ATP6AP2 in granular cell tumors

Massively parallel sequencing of phyllodes tumours of the breast reveals actionable mutations, and TERT promoter hotspot mutations and TERT gene amplification as likely drivers of progression

Multiomic Integration of Public Oncology Databases in Bioconductor

Reconstructing a hydrogen-driven microbial metabolic network in Opalinus Clay rock

The Cancer Genome Atlas Comprehensive Molecular Characterization of Renal Cell Carcinoma

The Fennoscandian Shield deep terrestrial virosphere suggests slow motion 'boom and burst' cycles

The evolution of RET inhibitor resistance in RET-driven lung and thyroid cancers