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List of works by John Cushman

A CAM- and starch-deficient mutant of the facultative CAM species Mesembryanthemum crystallinum reconciles sink demands by repartitioning carbon during acclimation to salinity ⬇️

scientific article published on January 4, 2012

A Sister Group Contrast Using Untargeted Global Metabolomic Analysis Delineates the Biochemical Regulation Underlying Desiccation Tolerance in Sporobolus stapfianus ⬇️

scientific article published on April 5, 2011

A Vitis vinifera basic helix-loop-helix transcription factor enhances plant cell size, vegetative biomass and reproductive yield

scientific article published on 9 March 2018

A novel coiled-coil protein co-localizes and interacts with a calcium-dependent protein kinase in the common ice plant during low-humidity stress

scientific article published on 14 June 2006

A novel yeast two-hybrid approach to identify CDPK substrates: characterization of the interaction between AtCPK11 and AtDi19, a nuclear zinc finger protein

scientific article published on 18 January 2006

A roadmap for research on crassulacean acid metabolism (CAM) to enhance sustainable food and bioenergy production in a hotter, drier world

scientific article

A salinity-induced gene from the halophyte M. crystallinum encodes a glycolytic enzyme, cofactor-independent phosphoglyceromutase ⬇️

scientific article published on October 1, 1995

A stress-induced calcium-dependent protein kinase from Mesembryanthemum crystallinum phosphorylates a two-component pseudo-response regulator

scientific article published on December 2000

An rbcL mRNA-binding protein is associated with C3 to C4 evolution and light-induced production of Rubisco in Flaveria

scientific article

Annotating genes of known and unknown function by large-scale coexpression analysis

scientific article published on 19 March 2008

Are the metabolic components of crassulacean acid metabolism up-regulated in response to an increase in oxidative burden?

scientific article

Autophosphorylation and subcellular localization dynamics of a salt- and water deficit-induced calcium-dependent protein kinase from ice plant

scientific article published on 9 July 2004

CRASSULACEAN ACID METABOLISM: Molecular Genetics

scientific article published in June 1999

Calcium-Dependent Protein Kinases from Arabidopsis Show Substrate Specificity Differences in an Analysis of 103 Substrates ⬇️

scientific article published on August 30, 2011

Characterization and expression of a NADP-malic enzyme cDNA induced by salt stress from the facultative crassulacean acid metabolism plant, Mesembryanthemum crystallinum

scientific article published on September 1, 1992

Characterization and expression of photosystem II genes (psbE, psbF, and psbL) from the facultative crassulacean acid metabolism plant Mesembryanthemum crystallinum

scientific article published in June 1994

Characterizing the grape transcriptome. Analysis of expressed sequence tags from multiple Vitis species and development of a compendium of gene expression during berry development

scientific article

Charting plant interactomes: possibilities and challenges

scientific article published on 07 March 2008

Climate-resilient agroforestry: physiological responses to climate change and engineering of crassulacean acid metabolism (CAM) as a mitigation strategy

scientific article

Comparative metabolic profiling between desiccation‐sensitive and desiccation‐tolerant species of Selaginella reveals insights into the resurrection trait ⬇️

scientific article published on October 19, 2012

Conformation of a group 2 late embryogenesis abundant protein from soybean. Evidence of poly (L-proline)-type II structure

scientific article published in March 2003

Conservation and divergence of circadian clock operation in a stress-inducible Crassulacean acid metabolism species reveals clock compensation against stress

scientific article (publication date: March 2005)

Crassulacean acid metabolism and epiphytism linked to adaptive radiations in the Orchidaceae

scientific article published on 30 January 2009

Crassulacean acid metabolism. A plastic photosynthetic adaptation to arid environments

scientific article

Dehydration tolerance in plants

scientific article

Developmental control of crassulacean Acid metabolism inducibility by salt stress in the common ice plant

scientific article published on November 1990

Divide and Conquer (DC) BLAST: fast and easy BLAST execution within HPC environments

scientific article

Draft Nuclear Genome Sequence of the Halophilic and Beta-Carotene-Accumulating Green Alga Dunaliella salina Strain CCAP19/18.

scientific article published on 26 October 2017

ESTAP--an automated system for the analysis of EST data

scientific article

Early and late responses of grapevine (Vitis vinifera L.) to water deficit: a proteomics perspective

article

Editorial: Systems Biology and Synthetic Biology in Relation to Drought Tolerance or Avoidance in Plants

scientific article published on 09 April 2020

Enhanced tolerance to oxidative stress in transgenic Arabidopsis plants expressing proteins of unknown function

scientific article published on 9 July 2008

Evaluation of Diverse Microalgal Species as Potential Biofuel Feedstocks Grown Using Municipal Wastewater

article by Sage R. Hiibel et al published 11 May 2015 in Frontiers in Energy Research

Evolution along the crassulacean acid metabolism continuum

article

Evolution of l-DOPA 4,5-dioxygenase activity allows for recurrent specialisation to betalain pigmentation in Caryophyllales

scientific article published on 01 August 2019

Exploring the Relationship between Crassulacean Acid Metabolism (CAM) and Mineral Nutrition with a Special Focus on Nitrogen

scientific article published on 05 September 2019

Expressed sequence tag (EST) profiling in hyper saline shocked Dunaliella salina reveals high expression of protein synthetic apparatus components ⬇️

scientific article published on July 14, 2010

Expression of the CAM-form of phospho(enol)pyruvate carboxylase and nucleotide sequence of a full length cDNA from Mesembryanthemum crystallinum

scientific article

Expression, purification, and initial characterization of a recombinant form of plant PEP-carboxylase kinase from CAM-induced Mesembryanthemum crystallinum with enhanced solubility in Escherichia coli ⬇️

scientific article published on May 1, 2003

Generic recircumscriptions of Oncidiinae (Orchidaceae: Cymbidieae) based on maximum likelihood analysis of combined DNA datasets

scientific article published on 24 November 2011

Genes that are uniquely stress regulated in salt overly sensitive (sos) mutants

scientific article

Genomic approaches to plant stress tolerance

scientific article

Identification of Ice Plant (Mesembryanthemum crystallinum L.) MicroRNAs Using RNA-Seq and Their Putative Roles in High Salinity Responses in Seedlings

scientific article

Identification of enhancer and silencer regions involved in salt-responsive expression of Crassulacean acid metabolism (CAM) genes in the facultative halophyte Mesembryanthemum crystallinum ⬇️

scientific article published on May 1, 1995

Identification of genes encoding enzymes catalyzing the early steps of carrot polyacetylene biosynthesis

article

Identification of proteins that interact with catalytically active calcium-dependent protein kinases from Arabidopsis

scientific article

Identification of tissue-specific, abiotic stress-responsive gene expression patterns in wine grape (Vitis viniferaL.) based on curation and mining of large-scale EST data sets ⬇️

scientific article published on May 18, 2011

Induction of Crassulacean acid metabolism by water limitation

scientific article published on February 2002

Interview with John C. Cushman

scientific article published on 4 April 2014

Isolation and characterization of a drought-induced soybean cDNA encoding a D95 family late-embryogenesis-abundant protein

scientific article published on October 1994

Isolation and characterization of a novel v-SNARE family protein that interacts with a calcium-dependent protein kinase from the common ice plant, Mesembryanthemum crystallinum

scientific article published in March 2007

Isolation and characterization of mutants of common ice plant deficient in crassulacean acid metabolism

scientific article published on 7 March 2008

Large-scale mRNA expression profiling in the common ice plant, Mesembryanthemum crystallinum, performing C3 photosynthesis and Crassulacean acid metabolism (CAM).

scientific article

Laying the Foundation for Crassulacean Acid Metabolism (CAM) Biodesign: Expression of the C Metabolism Cycle Genes of CAM in

article

Leaf carbohydrates influence transcriptional and post-transcriptional regulation of nocturnal carboxylation and starch degradation in the facultative CAM plant, Mesembryanthemum crystallinum.

scientific article published on 5 August 2017

Light-responsive expression atlas reveals the effects of light quality and intensity in Kalanchoë fedtschenkoi, a plant with crassulacean acid metabolism

scientific article published on 01 March 2020

Metabolic rates associated with membrane fatty acids in mice selected for increased maximal metabolic rate ⬇️

scientific article published on February 16, 2013

Metabolomic profiling in Selaginella lepidophylla at various hydration states provides new insights into the mechanistic basis of desiccation tolerance

scientific article published on 13 December 2012

Molecular Genetics of Crassulacean Acid Metabolism

scientific article

Molecular cloning and expression of chloroplast NADP-malate dehydrogenase during Crassulacean acid metabolism induction by salt stress

scientific article

Multiple isoforms of phosphoenolpyruvate carboxylase in the Orchidaceae (subtribe Oncidiinae): implications for the evolution of crassulacean acid metabolism

scientific article

Nucleotide sequence of the Ppc2 gene encoding a housekeeping isoform of phosphoenolpyruvate carboxylase from Mesembryanthemum crystallinum

scientific article

Nucleotide sequence of the gene encoding a CAM specific isoform of phosphoenolpyruvate carboxylase from Mesembryanthemum crystallinum

scientific article

Organization of the psbE, psbF, orf38, and orf42 gene loci on the Euglena gracilis chloroplast genome

scientific article published in February 1988

Plant Tissue Succulence Engineering Improves Water-use Efficiency, Water-deficit Stress Attenuation, and Salinity Tolerance in Arabidopsis

scientific article published on 27 April 2020

Plant responses and adaptations to a changing climate

scientific article published in 2022

Posttranscriptional and Posttranslational Control of Enolase Expression in the Facultative Crassulacean Acid Metabolism Plant Mesembryanthemum crystallinum L ⬇️

scientific article published on July 1, 1995

Proteomic analysis reveals differences between Vitis vinifera L. cv. Chardonnay and cv. Cabernet Sauvignon and their responses to water deficit and salinity

scientific article published on 18 April 2007

Proteomic and selected metabolite analysis of grape berry tissues under well-watered and water-deficit stress conditions

scientific article

Proteomic profiling of tandem affinity purified 14-3-3 protein complexes in Arabidopsis thaliana

scientific article

Quantitative ROS bio-reporters: a robust toolkit for studying biological roles of reactive oxygen species in response to abiotic and biotic stresses

Salt stress alters A/T-rich DNA-binding factor interactions within the phosphoenolpyruvate carboxylase promoter from Mesembryanthemum crystallinum

scientific article

Salt stress leads to differential expression of two isogenes of phosphoenolpyruvate carboxylase during Crassulacean acid metabolism induction in the common ice plant

scientific article published on July 1989

Simultaneous chloroplast, mitochondria isolation and mitochondrial protein preparation for two-dimensional electrophoresis analysis of Ice plant leaves under well watered and water-deficit stressed treatments

scientific article published on 01 December 2018

Sporobolus stapfianus: Insights into desiccation tolerance in the resurrection grasses from linking transcriptomics to metabolomics

scientific article

Synthesis and Turnover of Proteins in Proplastids and Chloroplasts of Euglena gracilis

scientific article published in December 1986

Temperature-induced extended helix/random coil transitions in a group 1 late embryogenesis-abundant protein from soybean.

scientific article

Temporal and spatial transcriptomic and microRNA dynamics of CAM photosynthesis in pineapple

scientific article

The Arabidopsis AtDi19 gene family encodes a novel type of Cys2/His2 zinc-finger protein implicated in ABA-independent dehydration, high-salinity stress and light signaling pathways

scientific article

The Dunaliella salina organelle genomes: large sequences, inflated with intronic and intergenic DNA

scientific article

The Kalanchoë genome provides insights into convergent evolution and building blocks of crassulacean acid metabolism

scientific article

The Vitis vinifera C-repeat binding protein 4 (VvCBF4) transcriptional factor enhances freezing tolerance in wine grape

scientific article

The incidence of crassulacean acid metabolism in Orchidaceae derived from carbon isotope ratios: a checklist of the flora of Panama and Costa Rica

article

The microbial opsin family of optogenetic tools

scientific article

The pineapple genome and the evolution of CAM photosynthesis

scientific article published on 2 November 2015

The unicellular green alga Dunaliella salina Teod. as a model for abiotic stress tolerance: genetic advances and future perspectives

article

Tissue-specific mRNA expression profiling in grape berry tissues

scientific article

Tolerance of Mannitol-Accumulating Transgenic Wheat to Water Stress and Salinity ⬇️

scientific article published on April 1, 2003

Transcript abundance profiles reveal larger and more complex responses of grapevine to chilling compared to osmotic and salinity stress

scientific article

Transcript profiling of salinity stress responses by large-scale expressed sequence tag analysis in Mesembryanthemum crystallinum

scientific article

Transcriptomic and metabolite analyses of Cabernet Sauvignon grape berry development

scientific article

Understanding trait diversity associated with crassulacean acid metabolism (CAM)

scientific article published on 01 June 2019

Water Deficit Increases Stilbene Metabolism in Cabernet Sauvignon Berries ⬇️

scientific article published on December 3, 2010

Water and salinity stress in grapevines: early and late changes in transcript and metabolite profiles

scientific article published on 29 November 2006

Water deficit alters differentially metabolic pathways affecting important flavor and quality traits in grape berries of Cabernet Sauvignon and Chardonnay

scientific article

What makes species unique? The contribution of proteins with obscure features

scientific article published on January 2006

cDNA Clones Encoding 1,3-β-Glucanase and a Fimbrin-Like Cytoskeletal Protein Are Induced by Al Toxicity in Wheat Roots ⬇️

scientific article published on August 1, 1997

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