List of works - Hernán A. Burbano

A Draft Sequence of the Neandertal Genome

scientific article

A Robust Framework for Microbial Archaeology

scientific article

A complete Neandertal mitochondrial genome sequence determined by high-throughput sequencing

scientific article

A draft genome of Yersinia pestis from victims of the Black Death

scientific article

A map of climate change-driven natural selection in Arabidopsis thaliana

scholarly article published 14 May 2018

A rainfall-manipulation experiment with 517 Arabidopsis thaliana accessions

A recent evolutionary change affects a regulatory element in the human FOXP2 gene

scientific article published on 28 November 2012

African genomes illuminate the early history and transition to selfing in Arabidopsis thaliana.

scientific article

Analysis of human accelerated DNA regions using archaic hominin genomes

scientific article

Analysis of tRNA abstract shapes of precursor/derivative amino acids in Archaea

scientific article published on 15 March 2007

Ancient DNA genomics and the renaissance of herbaria

scientific article published in 2023

Ancient gene flow from early modern humans into Eastern Neanderthals

scientific article

Annotation of primate miRNAs by high throughput sequencing of small RNA libraries

scientific article

Comparative population genomics of the ejaculate in humans and the great apes

scientific article

Contesting the presence of wheat in the British Isles 8,000 years ago by assessing ancient DNA authenticity from low-coverage data

scientific article

Correction: The rise and fall of the Phytophthora infestans lineage that triggered the Irish potato famine

scientific article

DNA analysis of an early modern human from Tianyuan Cave, China

scientific article (publication date: 5 February 2013)

Differential loss of effector genes in three recently expanded pandemic clonal lineages of the rice blast fungus

scientific article published on 16 July 2020

Erratum: A draft genome of Yersinia pestis from victims of the Black Death

scientific article published in Nature

Extraction of ultrashort DNA molecules from herbarium specimens

Extraction of ultrashort DNA molecules from herbarium specimens.

scientific article

Fine-scale Population Structure of North American Arabidopsis thaliana Reveals Multiple Sources of Introduction from Across Eurasia

scientific article published on 22 January 2021

Funders should allow for cost of publication

scientific article published in Nature

Genomic basis and evolutionary potential for extreme drought adaptation in Arabidopsis thaliana.

scientific article

Genomic estimation of complex traits reveals ancient maize adaptation to temperate North America.

scientific article published in August 2017

Hybridization ddRAD-sequencing for population genomics of non-model plants using highly degraded historical specimen DNA

scientific article published on 19 April 2020

Isolation, Library Preparation, and Bioinformatic Analysis of Historical and Ancient Plant DNA

scientific article published on 01 December 2020

Mining ancient microbiomes using selective enrichment of damaged DNA molecules

scientific article published on 26 June 2020

Mining herbaria for plant pathogen genomes: back to the future

scientific article (publication date: April 2014)

Multiple Sources of Introduction of North American Arabidopsis thaliana from across Eurasia

scientific article published on 01 December 2021

Museum phylogenomics of extinct Oryctes beetles from the Mascarene Islands

scientific article published on 20 February 2020

Natural selection on the Arabidopsis thaliana genome in present and future climates

scientific article published on 28 August 2019

Neandertal and Denisovan DNA from Pleistocene sediments.

scientific article

Patterns of coding variation in the complete exomes of three Neandertals.

scientific article

Publisher Correction: Natural selection on the Arabidopsis thaliana genome in present and future climates

scientific article published on 01 October 2019

Rabbit genome analysis reveals a polygenic basis for phenotypic change during domestication

scientific article

Rapid divergence and high diversity of miRNAs and miRNA targets in the Camelineae

scientific article published on 21 January 2015

Rapid weed adaptation and range expansion in response to agriculture over the past two centuries

scientific article published on 9 December 2022

Recently expanded clonal lineages of the rice blast fungus display distinct patterns of presence/absence of effector genes

scientific article published on 10 January 2020

Reinforcing plant evolutionary genomics using ancient DNA.

scientific article

Targeted investigation of the Neandertal genome by array-based sequence capture

scientific article

Targeted resequencing of a genomic region influencing tameness and aggression reveals multiple signals of positive selection

scientific article

Temporal patterns of damage and decay kinetics of DNA retrieved from plant herbarium specimens

scientific article

The Earth BioGenome project: opportunities and challenges for plant genomics and conservation

scientific article published on 01 December 2019

The Neandertal genome and ancient DNA authenticity

scientific article

The derived FOXP2 variant of modern humans was shared with Neandertals

scientific article (publication date: November 2007)

The genomic architecture of population divergence between subspecies of the European rabbit

scientific article

The origins and adaptation of European potatoes reconstructed from historical genomes

scientific article published on 24 June 2019

The rate and potential relevance of new mutations in a colonizing plant lineage

scientific article published on 12 February 2018

The rate and potential relevance of new mutations in a colonizing plant lineage

article

The rise and fall of the Phytophthora infestans lineage that triggered the Irish potato famine

scientific article published in 2013

Tissue-specific silencing of Arabidopsis SU(VAR)3-9 HOMOLOG8 by miR171a.

scientific article published on 30 November 2012

Transcription factors are targeted by differentially expressed miRNAs in primates

scientific article

Using herbaria to study global environmental change

scientific article published on 30 August 2018

Using herbaria to study global environmental change

nQuire: A Statistical Framework For Ploidy Estimation Using Next Generation Sequencing

nQuire: a statistical framework for ploidy estimation using next generation sequencing.

scientific article published on 4 April 2018

List of works by Hernán A. Burbano

A Draft Sequence of the Neandertal Genome

A Robust Framework for Microbial Archaeology

A complete Neandertal mitochondrial genome sequence determined by high-throughput sequencing

A draft genome of Yersinia pestis from victims of the Black Death

A map of climate change-driven natural selection in Arabidopsis thaliana

A rainfall-manipulation experiment with 517 Arabidopsis thaliana accessions

A recent evolutionary change affects a regulatory element in the human FOXP2 gene

African genomes illuminate the early history and transition to selfing in Arabidopsis thaliana.

Analysis of human accelerated DNA regions using archaic hominin genomes

Analysis of tRNA abstract shapes of precursor/derivative amino acids in Archaea

Ancient DNA genomics and the renaissance of herbaria

Ancient gene flow from early modern humans into Eastern Neanderthals

Annotation of primate miRNAs by high throughput sequencing of small RNA libraries

Comparative population genomics of the ejaculate in humans and the great apes

Contesting the presence of wheat in the British Isles 8,000 years ago by assessing ancient DNA authenticity from low-coverage data

Correction: The rise and fall of the Phytophthora infestans lineage that triggered the Irish potato famine

DNA analysis of an early modern human from Tianyuan Cave, China

Differential loss of effector genes in three recently expanded pandemic clonal lineages of the rice blast fungus

Erratum: A draft genome of Yersinia pestis from victims of the Black Death

Extraction of ultrashort DNA molecules from herbarium specimens

Extraction of ultrashort DNA molecules from herbarium specimens.

Fine-scale Population Structure of North American Arabidopsis thaliana Reveals Multiple Sources of Introduction from Across Eurasia

Funders should allow for cost of publication

Genomic basis and evolutionary potential for extreme drought adaptation in Arabidopsis thaliana.

Genomic estimation of complex traits reveals ancient maize adaptation to temperate North America.

Hybridization ddRAD-sequencing for population genomics of non-model plants using highly degraded historical specimen DNA

Isolation, Library Preparation, and Bioinformatic Analysis of Historical and Ancient Plant DNA

Mining ancient microbiomes using selective enrichment of damaged DNA molecules

Mining ancient microbiomes using selective enrichment of damaged DNA molecules

Mining herbaria for plant pathogen genomes: back to the future

Multiple Sources of Introduction of North American Arabidopsis thaliana from across Eurasia

Museum phylogenomics of extinct Oryctes beetles from the Mascarene Islands

Natural selection on the Arabidopsis thaliana genome in present and future climates

Neandertal and Denisovan DNA from Pleistocene sediments.

Patterns of coding variation in the complete exomes of three Neandertals.

Publisher Correction: Natural selection on the Arabidopsis thaliana genome in present and future climates

Rabbit genome analysis reveals a polygenic basis for phenotypic change during domestication

Rapid divergence and high diversity of miRNAs and miRNA targets in the Camelineae

Rapid weed adaptation and range expansion in response to agriculture over the past two centuries

Recently expanded clonal lineages of the rice blast fungus display distinct patterns of presence/absence of effector genes

Reinforcing plant evolutionary genomics using ancient DNA.

Targeted investigation of the Neandertal genome by array-based sequence capture

Targeted resequencing of a genomic region influencing tameness and aggression reveals multiple signals of positive selection

Temporal patterns of damage and decay kinetics of DNA retrieved from plant herbarium specimens

The Earth BioGenome project: opportunities and challenges for plant genomics and conservation

The Neandertal genome and ancient DNA authenticity

The derived FOXP2 variant of modern humans was shared with Neandertals

The genomic architecture of population divergence between subspecies of the European rabbit

The origins and adaptation of European potatoes reconstructed from historical genomes

The rate and potential relevance of new mutations in a colonizing plant lineage

The rate and potential relevance of new mutations in a colonizing plant lineage

The rise and fall of the Phytophthora infestans lineage that triggered the Irish potato famine

Tissue-specific silencing of Arabidopsis SU(VAR)3-9 HOMOLOG8 by miR171a.

Transcription factors are targeted by differentially expressed miRNAs in primates

Using herbaria to study global environmental change

Using herbaria to study global environmental change

Using herbaria to study global environmental change

nQuire: A Statistical Framework For Ploidy Estimation Using Next Generation Sequencing

nQuire: a statistical framework for ploidy estimation using next generation sequencing.