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List of works by Bruno Gaeta

Analysis of genome-wide association study data using the protein knowledge base

scientific article

Applying, Evaluating and Refining Bioinformatics Core Competencies (An Update from the Curriculum Task Force of ISCB's Education Committee).

scientific article

BLAST ... what next?

scientific article published on 01 May 2000

BLAST on the Web

scientific article published on 01 March 2000

Benchmarking the performance of human antibody gene alignment utilities using a 454 sequence dataset.

scientific article

Biocomputing education by the Australian National Genomic Information Service

article

Bioinformatics curriculum guidelines: toward a definition of core competencies

scientific article

Candidate disease gene prediction using Gentrepid: application to a genome-wide association study on coronary artery disease

scientific article

Clustering-based identification of clonally-related immunoglobulin gene sequence sets ⬇️

scientific article published on September 27, 2010

Combining spatial and chemical information for clustering pharmacophores

scientific article published on 8 December 2014

Divergent human populations show extensive shared IGK rearrangements in peripheral blood B cells

scientific article published on 26 July 2011

Exonuclease activity and P nucleotide addition in the generation of the expressed immunoglobulin repertoire

scientific article

Fld1p, a functional homologue of human seipin, regulates the size of lipid droplets in yeast

scientific article

Genomic screening by 454 pyrosequencing identifies a new human IGHV gene and sixteen other new IGHV allelic variants.

scientific article published on 20 January 2011

Gentrepid V2.0: a web server for candidate disease gene prediction

scientific article

ISCB's initial reaction to New England Journal of Medicine editorial on data sharing

scientific article

Identification of vaccine candidate antigens from a genomic analysis of Porphyromonas gingivalis

article

Identifying highly mutated IGHD genes in the junctions of rearranged human immunoglobulin heavy chain genes.

scientific article published on 15 May 2007

IgE Sequences in Individuals Living in an Area of Endemic Parasitism Show Little Mutational Evidence of Antigen Selection ⬇️

scientific article published on May 1, 2011

IgE-associated IGHV genes from venom and peanut allergic individuals lack mutational evidence of antigen selection

scientific article

Individual variation in the germline Ig gene repertoire inferred from variable region gene rearrangements.

scientific article published on 21 May 2010

MINER: exploratory analysis of gene interaction networks by machine learning from expression data.

scientific article

Parallelizing Optimal Multiple Sequence Alignment by Dynamic Programming

Partitioning of rearranged Ig genes by mutation analysis demonstrates D-D fusion and V gene replacement in the expressed human repertoire

scientific article published in January 2004

Reconsidering the human immunoglobulin heavy-chain locus: 1. An evaluation of the expressed human IGHD gene repertoire

scientific article

The GOBLET training portal: a global repository of bioinformatics training materials, courses and trainers

scientific article

The development and application of bioinformatics core competencies to improve bioinformatics training and education

scientific article published in February 2018

The inference of phased haplotypes for the immunoglobulin H chain V region gene loci by analysis of VDJ gene rearrangements.

scientific article published on 28 December 2011

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