List of works - Alessandra Corazza

(1)H, (13)C and (15)N backbone resonance assignments of the β-lactamase BlaP from Bacillus licheniformis 749/C and two mutational variants

scientific article

A differential equation for the Generalized Born radii

scientific article published in June 2013

A specific nanobody prevents amyloidogenesis of D76N β2-microglobulin in vitro and modifies its tissue distribution in vivo.

scientific article

Absolute quantification of choline-related biomarkers in breast cancer biopsies by liquid chromatography electrospray ionization mass spectrometry.

scientific article

Accuracy assessment of the linear Poisson-Boltzmann equation and reparametrization of the OBC generalized Born model for nucleic acids and nucleic acid-protein complexes

scientific article published on 8 January 2015

Accurate Estimation of the Entropy of Rotation-Translation Probability Distributions

scientific article published on 24 November 2015

Assessment of pretransplantation warm ischemia time by phosphorus-31 magnetic resonance spectroscopy in pig kidneys

article

Automation of peak-tracking analysis of stepwise perturbed NMR spectra

scientific article published on 17 February 2017

Beta2-microglobulin isoforms display an heterogeneous affinity for type I collagen

scientific article published on 2 February 2005

Binding of Monovalent and Bivalent Ligands by Transthyretin Causes Different Short- and Long-Distance Conformational Changes

scientific article published on 22 August 2019

Binding of cations of group IA and IIA to bovine serum amine oxidase: effect on the activity

scientific article published on October 2002

Biphasic behavior of the kinetics of 31P-containing metabolites in ischemic porcine kidneys

scientific article published on 01 December 2003

Bluues server: electrostatic properties of wild-type and mutated protein structures.

scientific article

Bluues: a program for the analysis of the electrostatic properties of proteins based on generalized Born radii

scientific article

Carnosine inhibits Aβ(42) aggregation by perturbing the H-bond network in and around the central hydrophobic cluster

scientific article published on 25 February 2013

Citrate stabilized gold nanoparticles interfere with amyloid fibril formation: D76N and ΔN6 β2-microglobulin variants

scientific article published on 01 March 2018

Citrate-stabilized gold nanoparticles hinder fibrillogenesis of a pathological variant of β2-microglobulin.

scientific article published on 7 March 2017

Collagen plays an active role in the aggregation of beta2-microglobulin under physiopathological conditions of dialysis-related amyloidosis

scientific article published in Journal of Biological Chemistry

Computational design of cyclic peptides for the customized oriented immobilization of globular proteins

scientific article published on 6 January 2017

Conformational stability of neuroglobin helix F--possible effects on the folding pathway within the globin family

scientific article

Conversion of the Native N-Terminal Domain of TDP-43 into a Monomeric Alternative Fold with Lower Aggregation Propensity

scientific article published in 2022

Determining the energy landscape of proteins by a fast isotope exchange NMR approach.

scientific article published on 5 March 2012

Distance-Based Configurational Entropy of Proteins from Molecular Dynamics Simulations

scientific article

Effect of phosphate ion on the activity of bovine plasma amine oxidase

scientific article published on December 15, 1992

Effect of polyphosphates on the activity of amine oxidases

scientific article published on 01 March 1995

Effect of tetracyclines on the dynamics of formation and destructuration of beta2-microglobulin amyloid fibrils

scientific article

Electrostatic compared with hydrophobic interactions between bovine serum amine oxidase and its substrates

scientific article published in April 2003

Enzyme mimics complexing Cu(II) ion: structure-function relationships

scientific article published on 01 December 1999

Equilibrium unfolding thermodynamics of beta2-microglobulin analyzed through native-state H/D exchange

scientific article

Estimation of $$^{3}J_{HN\hbox{-}H\alpha}$$ and $$^{3}J_{H\alpha\hbox{-}H\beta}$$ coupling constants from heteronuclear TOCSY spectra

scientific article published on 01 November 2007

Fast structure similarity searches among protein models: efficient clustering of protein fragments

scientific article published on 29 May 2012

Folding and fibrillogenesis: clues from beta2-microglobulin.

scientific article published on 15 June 2010

Generalized Born forces: surface integral formulation

scientific article published in February 2013

Helix mobility and recognition function of the rat thyroid transcription factor 1 homeodomain - hints from 15N-NMR relaxation studies

article

High-performance metabolic marker assessment in breast cancer tissue by mass spectrometry

Inhibition of the mechano-enzymatic amyloidogenesis of transthyretin: role of ligand affinity, binding cooperativity and occupancy of the inner channel.

scientific article

Interaction of copper with cysteine: stability of cuprous complexes and catalytic role of cupric ions in anaerobic thiol oxidation

scientific article published in September 2004

Interference of citrate-stabilized gold nanoparticles with β2-microglobulin oligomeric association

scientific article published on 01 May 2018

Molecular dynamics simulation of β2-microglobulin in denaturing and stabilizing conditions

scientific article published on 22 December 2010

Molecular dynamics simulation suggests possible interaction patterns at early steps of beta2-microglobulin aggregation.

scientific article published on 8 December 2006

Molecular dynamics simulations of β2-microglobulin interaction with hydrophobic surfaces.

scientific article

Monitoring the interaction between β2-microglobulin and the molecular chaperone αB-crystallin by NMR and mass spectrometry: αB-crystallin dissociates β2-microglobulin oligomers.

scientific article published on 03 May 2013

NMR solution structure of the acylphosphatase from Escherichia coli.

scientific article published on 5 October 2006

NMR-based homology model for the solution structure of the C-terminal globular domain of EMILIN1

scientific article

Native-unlike long-lived intermediates along the folding pathway of the amyloidogenic protein beta2-microglobulin revealed by real-time two-dimensional NMR.

scientific article published on 22 December 2009

Oligomeric states along the folding pathways of β2-microglobulin: kinetics, thermodynamics, and structure.

scientific article published on 3 May 2013

Plasminogen activation triggers transthyretin amyloidogenesis

scientific article published in Journal of Biological Chemistry

Probing the influence of citrate-capped gold nanoparticles on an amyloidogenic protein

scientific article published on 4 March 2015

Properties of Some Variants of Human β2-Microglobulin and Amyloidogenesis

scientific article published in Journal of Biological Chemistry

Rapid oligomer formation of human muscle acylphosphatase induced by heparan sulfate.

scientific article published on 22 April 2012

Rational design of mutations that change the aggregation rate of a protein while maintaining its native structure and stability

scientific article published on 6 May 2016

Reduction of conformational mobility and aggregation in W60G β2-microglobulin: assessment by 15N NMR relaxation.

scientific article published on 18 October 2013

Scoring predictive models using a reduced representation of proteins: model and energy definition.

scientific article

Sequence-specific backbone NMR assignments for the C-terminal globular domain of EMILIN-1.

scientific article published in May 2004

Single-shot NMR measurement of protein unfolding landscapes.

scientific article published on 13 April 2012

Solution structure of beta(2)-microglobulin and insights into fibrillogenesis.

scientific article

Structural and dynamics characteristics of acylphosphatase from Sulfolobus solfataricus in the monomeric state and in the initial native-like aggregates

scientific article published on 11 March 2010

Structural and folding dynamic properties of the T70N variant of human lysozyme.

scientific article published on 22 April 2003

Structure, conformational stability, and enzymatic properties of acylphosphatase from the hyperthermophile Sulfolobus solfataricus

scientific article

Structure, folding dynamics, and amyloidogenesis of D76N β2-microglobulin: roles of shear flow, hydrophobic surfaces, and α-crystallin.

scientific article published on 06 September 2013

Studying interactions by molecular dynamics simulations at high concentration

scientific article published on 22 February 2012

The Solution Structure of DNA-free Pax-8 Paired Box Domain Accounts for Redox Regulation of Transcriptional Activity in the Pax Protein Family

scientific article

The controlling roles of Trp60 and Trp95 in beta2-microglobulin function, folding and amyloid aggregation properties

scientific article

The solution structure of EMILIN1 globular C1q domain reveals a disordered insertion necessary for interaction with the alpha4beta1 integrin

scientific journal article

The solution structure of human β2-microglobulin reveals the prodromes of its amyloid transition

scientific article

Variants of β2-microglobulin cleaved at lysine-58 retain the main conformational features of the native protein but are more conformationally heterogeneous and unstable at physiological temperature

scientific article published on 01 June 2006

beta2-microglobulin H31Y variant 3D structure highlights the protein natural propensity towards intermolecular aggregation

scientific article

List of works by Alessandra Corazza

(1)H, (13)C and (15)N backbone resonance assignments of the β-lactamase BlaP from Bacillus licheniformis 749/C and two mutational variants

A differential equation for the Generalized Born radii

A specific nanobody prevents amyloidogenesis of D76N β2-microglobulin in vitro and modifies its tissue distribution in vivo.

Absolute quantification of choline-related biomarkers in breast cancer biopsies by liquid chromatography electrospray ionization mass spectrometry.

Accuracy assessment of the linear Poisson-Boltzmann equation and reparametrization of the OBC generalized Born model for nucleic acids and nucleic acid-protein complexes

Accurate Estimation of the Entropy of Rotation-Translation Probability Distributions

Assessment of pretransplantation warm ischemia time by phosphorus-31 magnetic resonance spectroscopy in pig kidneys

Automation of peak-tracking analysis of stepwise perturbed NMR spectra

Beta2-microglobulin isoforms display an heterogeneous affinity for type I collagen

Binding of Monovalent and Bivalent Ligands by Transthyretin Causes Different Short- and Long-Distance Conformational Changes

Binding of cations of group IA and IIA to bovine serum amine oxidase: effect on the activity

Biphasic behavior of the kinetics of 31P-containing metabolites in ischemic porcine kidneys

Bluues server: electrostatic properties of wild-type and mutated protein structures.

Bluues: a program for the analysis of the electrostatic properties of proteins based on generalized Born radii

Carnosine inhibits Aβ(42) aggregation by perturbing the H-bond network in and around the central hydrophobic cluster

Citrate stabilized gold nanoparticles interfere with amyloid fibril formation: D76N and ΔN6 β2-microglobulin variants

Citrate-stabilized gold nanoparticles hinder fibrillogenesis of a pathological variant of β2-microglobulin.

Collagen plays an active role in the aggregation of beta2-microglobulin under physiopathological conditions of dialysis-related amyloidosis

Computational design of cyclic peptides for the customized oriented immobilization of globular proteins

Conformational stability of neuroglobin helix F--possible effects on the folding pathway within the globin family

Conversion of the Native N-Terminal Domain of TDP-43 into a Monomeric Alternative Fold with Lower Aggregation Propensity

Determining the energy landscape of proteins by a fast isotope exchange NMR approach.

Distance-Based Configurational Entropy of Proteins from Molecular Dynamics Simulations

Effect of phosphate ion on the activity of bovine plasma amine oxidase

Effect of polyphosphates on the activity of amine oxidases

Effect of tetracyclines on the dynamics of formation and destructuration of beta2-microglobulin amyloid fibrils

Electrostatic compared with hydrophobic interactions between bovine serum amine oxidase and its substrates

Enzyme mimics complexing Cu(II) ion: structure-function relationships

Equilibrium unfolding thermodynamics of beta2-microglobulin analyzed through native-state H/D exchange

Estimation of $$^{3}J_{HN\hbox{-}H\alpha}$$ and $$^{3}J_{H\alpha\hbox{-}H\beta}$$ coupling constants from heteronuclear TOCSY spectra

Fast structure similarity searches among protein models: efficient clustering of protein fragments

Folding and fibrillogenesis: clues from beta2-microglobulin.

Generalized Born forces: surface integral formulation

Helix mobility and recognition function of the rat thyroid transcription factor 1 homeodomain - hints from 15N-NMR relaxation studies

High-performance metabolic marker assessment in breast cancer tissue by mass spectrometry

Inhibition of the mechano-enzymatic amyloidogenesis of transthyretin: role of ligand affinity, binding cooperativity and occupancy of the inner channel.

Interaction of copper with cysteine: stability of cuprous complexes and catalytic role of cupric ions in anaerobic thiol oxidation

Interference of citrate-stabilized gold nanoparticles with β2-microglobulin oligomeric association

Molecular dynamics simulation of β2-microglobulin in denaturing and stabilizing conditions

Molecular dynamics simulation suggests possible interaction patterns at early steps of beta2-microglobulin aggregation.

Molecular dynamics simulations of β2-microglobulin interaction with hydrophobic surfaces.

Monitoring the interaction between β2-microglobulin and the molecular chaperone αB-crystallin by NMR and mass spectrometry: αB-crystallin dissociates β2-microglobulin oligomers.

NMR solution structure of the acylphosphatase from Escherichia coli.

NMR-based homology model for the solution structure of the C-terminal globular domain of EMILIN1

Native-unlike long-lived intermediates along the folding pathway of the amyloidogenic protein beta2-microglobulin revealed by real-time two-dimensional NMR.

Oligomeric states along the folding pathways of β2-microglobulin: kinetics, thermodynamics, and structure.

Plasminogen activation triggers transthyretin amyloidogenesis

Probing the influence of citrate-capped gold nanoparticles on an amyloidogenic protein

Properties of Some Variants of Human β2-Microglobulin and Amyloidogenesis

Rapid oligomer formation of human muscle acylphosphatase induced by heparan sulfate.

Rational design of mutations that change the aggregation rate of a protein while maintaining its native structure and stability

Reduction of conformational mobility and aggregation in W60G β2-microglobulin: assessment by 15N NMR relaxation.

Scoring predictive models using a reduced representation of proteins: model and energy definition.

Sequence-specific backbone NMR assignments for the C-terminal globular domain of EMILIN-1.

Single-shot NMR measurement of protein unfolding landscapes.

Solution structure of beta(2)-microglobulin and insights into fibrillogenesis.

Structural and dynamics characteristics of acylphosphatase from Sulfolobus solfataricus in the monomeric state and in the initial native-like aggregates

Structural and folding dynamic properties of the T70N variant of human lysozyme.

Structure, conformational stability, and enzymatic properties of acylphosphatase from the hyperthermophile Sulfolobus solfataricus

Structure, folding dynamics, and amyloidogenesis of D76N β2-microglobulin: roles of shear flow, hydrophobic surfaces, and α-crystallin.

Studying interactions by molecular dynamics simulations at high concentration

The Solution Structure of DNA-free Pax-8 Paired Box Domain Accounts for Redox Regulation of Transcriptional Activity in the Pax Protein Family

The controlling roles of Trp60 and Trp95 in beta2-microglobulin function, folding and amyloid aggregation properties

The solution structure of EMILIN1 globular C1q domain reveals a disordered insertion necessary for interaction with the alpha4beta1 integrin

The solution structure of human β2-microglobulin reveals the prodromes of its amyloid transition

Variants of β2-microglobulin cleaved at lysine-58 retain the main conformational features of the native protein but are more conformationally heterogeneous and unstable at physiological temperature

beta2-microglobulin H31Y variant 3D structure highlights the protein natural propensity towards intermolecular aggregation