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List of works by Wilfred Otten

A fungal growth model fitted to carbon-limited dynamics of Rhizoctonia solani.

scientific article published on 28 February 2008

All-optical photoacoustic imaging and detection of early-stage dental caries

Analysis of physical pore space characteristics of two pyrolytic biochars and potential as microhabitat

Applications of percolation theory to fungal spread with synergy

scientific article published on 2 November 2011

Automated statistical method to align 2D chemical maps with 3D X-ray computed micro-tomographic images of soils

scholarly article

Biophysics of the Vadose Zone: From Reality to Model Systems and Back Again

article

Building soil sustainability from root–soil interface traits

scientific article published in 2022

Challenges and opportunities for quantifying roots and rhizosphere interactions through imaging and image analysis.

scientific article

Combination of techniques to quantify the distribution of bacteria in their soil microhabitats at different spatial scales

scholarly article

Control of Pore Geometry in Soil Microcosms and Its Effect on the Growth and Spread of Pseudomonas and Bacillus sp

scientific article published in 2018

Effect of bulk density on the spatial organisation of the fungus Rhizoctonia solani in soil

scientific article published on 01 May 2003

Effects of different soil structures on the decomposition of native and added organic carbon

article

Emergent Behavior of Soil Fungal Dynamics

article

Emergent Properties of Microbial Activity in Heterogeneous Soil Microenvironments: Different Research Approaches Are Slowly Converging, Yet Major Challenges Remain

scientific article published on 27 August 2018

Empirical evidence of spatial thresholds to control invasion of fungal parasites and saprotrophs

article

Environmental modification and niche construction: developing O2 gradients drive the evolution of the Wrinkly Spreader.

scientific article

Estimation of multiple transmission rates for epidemics in heterogeneous populations

scientific article

From Dust Bowl to Dust Bowl: Soils are Still Very Much a Frontier of Science

Functional root trait‐based classification of cover crops to improve soil physical properties

scientific article published on 15 July 2021

Fungal colonization in soils with different management histories: modeling growth in three-dimensional pore volumes

scientific article published in June 2011

In situ visualisation of fungi in soil thin sections: problems with crystallisation of the fluorochrome FB 28 (Calcofluor M2R) and improved staining by SCRI Renaissance 2200

article by Kirsty Harris et al published March 2002 in Mycological Research

Method to Quantify Short-Term Dynamics in Carbon Dioxide Emission Following Controlled Soil Deformation

article

Microscale Heterogeneity of the Spatial Distribution of Organic Matter Can Promote Bacterial Biodiversity in Soils: Insights From Computer Simulations

scientific article published on 27 July 2018

Microscale heterogeneity explains experimental variability and non-linearity in soil organic matter mineralisation

scientific article

New Local Thresholding Method for Soil Images by Minimizing Grayscale Intra-Class Variance

scientific article published in 2013

Observer-dependent variability of the thresholding step in the quantitative analysis of soil images and X-ray microtomography data

article

Percolation-based risk index for pathogen invasion: application to soilborne disease in propagation systems.

scientific article published on October 2013

Pore-Scale Monitoring of the Effect of Microarchitecture on Fungal Growth in a Two-Dimensional Soil-Like Micromodel

scientific article published in 2018

Prominent effect of soil network heterogeneity on microbial invasion.

scientific article published on 29 August 2012

Rainfall infiltration and soil hydrological characteristics below ancient forest, planted forest and grassland in a temperate northern climate

article

Research Efforts Involving Several Disciplines: Adherence to a Clear Nomenclature Is Needed

Soil aggregates as biogeochemical reactors: Not a way forward in the research on soil-atmosphere exchange of greenhouse gases

scientific article published on 29 April 2019

Soil architecture and preferential flow across scales

The Impact of Land-Use Practices on Soil Microbes

The effect of heterogeneity on invasion in spatial epidemics: from theory to experimental evidence in a model system

scientific article

The role of the natural environment in the emergence of antibiotic resistance in gram-negative bacteria

scientific article published on February 2013

Three-Dimensional Mapping of Soil Chemical Characteristics at Micrometric Scale by Combining 2D SEM-EDX Data and 3D X-Ray CT Images

scientific article

Three-Dimensional Study of F. graminearum Colonisation of Stored Wheat: Post-Harvest Growth Patterns, Dry Matter Losses and Mycotoxin Contamination

scientific article published on 01 August 2020

Toward Modeling the Resistance and Resilience of "Below-ground" Fungal Communities: A Mechanistic and Trait-Based Approach

scientific article published on 21 October 2015

Transparent soil for imaging the rhizosphere

scientific article

Transparent soil microcosms allow 3D spatial quantification of soil microbiological processes in vivo

scientific article

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