List of works - Simon Davy

13C metabolomics reveals widespread change in carbon fate during coral bleaching

scientific article published on 12 December 2017

A diverse host thrombospondin-type-1 repeat protein repertoire promotes symbiont colonization during establishment of cnidarian-dinoflagellate symbiosis.

scientific article

Ammonium excretion by a symbiotic sponge supplies the nitrogen requirements of its rhodophyte partner

scientific article published on November 2002

An enemy within? Observations of virus-like particles in reef corals.

scientific article published on 10 November 2004

Antioxidant plasticity and thermal sensitivity in four types of Symbiodinium sp.

scientific article

Bioeroding sponge assemblages: the importance of substrate availability and sediment

scholarly article published on 22 March 2018

Bleaching and recovery of a phototrophic bioeroding sponge

scholarly article published on 4 April 2018

Building Consensus around the Assessment and Interpretation of Symbiodiniaceae Diversity

scholarly article

Building consensus around the assessment and interpretation of Symbiodiniaceae diversity

scientific article published on 2 May 2023

Cell biology in model systems as the key to understanding corals

scientific article

Cell biology of cnidarian-dinoflagellate symbiosis.

scientific article

Cell wall proteomic analysis of the cnidarian photosymbionts <i>Breviolum minutum</i> and <i>Cladocopium goreaui</i>

scientific article published in 2021

Climate Change Alterations to Ecosystem Dominance: How Might Sponge-Dominated Reefs Function?

scientific article published in 2018

Climate change alterations to ecosystem dominance: how might sponge-dominated reefs function?

scientific article published on 30 July 2018

Comparison of the microalgal community within fast ice at two sites along the Ross Sea coast, Antarctica

article

Coral holobiont cues prime Endozoicomonas for a symbiotic lifestyle

scientific article published in 2022

Correction: The scavenger receptor repertoire in six cnidarian species and its putative role in cnidarian-dinoflagellate symbiosis

scientific article published on 6 June 2017

Correlations between algal abundance, environmental variables and sponge distribution patterns on southern hemisphere temperate rocky reefs

scholarly article

Could some coral reefs become sponge reefs as our climate changes?

scientific article

Differential ROS Generation in Response to Stress in Symbiodinium spp.

scientific article published in February 2018

Differential coral bleaching-Contrasting the activity and response of enzymatic antioxidants in symbiotic partners under thermal stress

scientific article published on 23 August 2015

Differential nitric oxide synthesis and host apoptotic events correlate with bleaching susceptibility in reef corals

scientific article published on 03 February 2014

Disease dynamics of Porites bleaching with tissue loss: prevalence, virulence, transmission, and environmental drivers.

scientific article published on February 2015

Early Development and Acquisition of Zooxanthellae in the Temperate Symbiotic Sea Anemone Anthopleura ballii (Cocks)

article

Effects of host nutritional status and seasonality on the nitrogen status of zooxanthellae in the temperate coral Plesiastrea versipora (Lamarck)

scientific article published on 26 May 2006

Elucidating the sponge stress response; lipids and fatty acids can facilitate survival under future climate scenarios.

scientific article published on 5 March 2018

Estimates of particulate organic carbon flowing from the pelagic environment to the benthos through sponge assemblages

scientific article

Exploratory analysis of Symbiodinium transcriptomes reveals potential latent infection by large dsDNA viruses

scientific article published on 2 May 2017

Expression patterns of sterol transporters NPC1 and NPC2 in the cnidarian-dinoflagellate symbiosis.

scientific article

Gross and microscopic morphology of lesions in Cnidaria from Palmyra Atoll, Central Pacific

scientific article published on 13 August 2010

Growth anomalies on the coral genera Acropora and Porites are strongly associated with host density and human population size across the Indo-Pacific

scientific article published on 18 February 2011

Hidden diversity in the genus Tethya: comparing molecular and morphological techniques for species identification

scientific article published on 21 August 2018

High single-cell metabolic activity in Antarctic sea ice bacteria

article by Andrew Martin et al published 19 June 2008 in Aquatic Microbial Ecology

Histological observations in the Hawaiian reef coral, Porites compressa, affected by Porites bleaching with tissue loss

scientific article published on 20 July 2012

Horizontal transmission of Symbiodinium cells between adult and juvenile corals is aided by benthic sediment

scientific article published on 23 September 2015

Host tolerance, not symbiont tolerance, determines the distribution of coral species in relation to their environment at a Central Pacific atoll

scholarly article

In situ responses of the sponge microbiome to ocean acidification

article

Increased cellular detoxification, cytoskeletal activities and protein transport explain physiological stress in a lagoon sponge

scientific article published in 2021

Influence of Symbiont Species on the Glycerol and Glucose Pools in a Model Cnidarian-Dinoflagellate Symbiosis

scientific article published on 29 September 2020

Influence of canopy-forming algae on temperate sponge assemblages

scholarly article in Journal of the Marine Biological Association of the United Kingdom, vol. 96 no. 2, January 2015

Influence of environmental variation on symbiotic bacterial communities of two temperate sponges

scientific article

Influence of local environmental variables on the viral consortia associated with the coral Montipora capitata from Kaneohe Bay, Hawaii, USA

scientific article published on 06 February 2015

Inter-partner specificity limits the acquisition of thermotolerant symbionts in a model cnidarian-dinoflagellate symbiosis

scientific article published on 11 June 2019

Interactive effects of temperature and pCO2 on sponges: from the cradle to the grave.

scientific article

Intra-genomic variation in Symbiodinium correlates negatively with photosynthetic efficiency and coral host performance

scholarly article published on 24 May 2018

Intra-genomic variation in symbiotic dinoflagellates: recent divergence or recombination between lineages?

scientific article

Intracellular pH and its response to CO2-driven seawater acidification in symbiotic versus non-symbiotic coral cells

scientific article

Introduction to the proceedings of the 9th International Symbiosis Congress

scholarly article

Latent virus-like infections are present in a diverse range of Symbiodinium spp. (Dinophyta).

scientific article published on 3 November 2014

Local endemicity and high diversity characterise high-latitude coral–Symbiodinium partnerships

scholarly article

Low functional redundancy in sponges as a result of differential picoplankton use.

scientific article

Mapping carbon fate during bleaching in a model cnidarian symbiosis: the application of 13 C metabolomics

scientific article

Menthol-induced bleaching rapidly and effectively provides experimental aposymbiotic sea anemones (Aiptasia sp.) for symbiosis investigations.

scientific article

Metabolite profiling of symbiont and host during thermal stress and bleaching in a model cnidarian-dinoflagellate symbiosis.

scientific article published on 18 December 2015

Metabolite profiling of symbiont and host during thermal stress and bleaching in the coral Acropora aspera

scholarly article

Modeling patterns of coral bleaching at a remote Central Pacific atoll

scientific article published on 11 June 2010

Mucus Sugar Content Shapes the Bacterial Community Structure in Thermally Stressed Acropora muricata

scientific article

Multi-gene incongruence consistent with hybridisation in Cladocopium (Symbiodiniaceae), an ecologically important genus of coral reef symbionts

scientific article published on 25 June 2019

Nitric oxide and coral bleaching: is peroxynitrite generation required for symbiosis collapse?

scientific article

Nitric oxide mediates coral bleaching through an apoptotic-like cell death pathway: evidence from a model sea anemone-dinoflagellate symbiosis

scientific article published on 9 August 2013

Nitric oxide production and tolerance differ among Symbiodinium types exposed to heat stress

scientific article published on 19 September 2012

Nutrient utilisation by shallow water temperate sponges in New Zealand

article

Ocean acidification in New Zealand waters: trends and impacts

article

Ocean warming and acidification have complex interactive effects on the dynamics of a marine fungal disease.

scientific article published on 22 January 2014

Optimal nutrient exchange and immune responses operate in partner specificity in the cnidarian-dinoflagellate symbiosis

scientific article published on 20 November 2017

Partner switching and metabolic flux in a model cnidarian–dinoflagellate symbiosis

scientific article published on 28 November 2018

Photoacclimation to light-limitation in a clionaid sponge; implications for understanding sponge bioerosion on turbid reefs

scientific article published on 24 July 2018

Photoacclimatory and photoprotective responses to cold versus heat stress in high latitude reef corals.

scientific article published on 21 November 2016

Photochemical efficiency and antioxidant capacity in relation to Symbiodinium genotype and host phenotype in a symbiotic cnidarian

scientific article published on 17 September 2014

Phylogenetic analyses of bacteria in sea ice at Cape Hallett, Antarctica

scholarly article by EW Maas et al published March 2012 in New Zealand Journal of Marine and Freshwater Research

Phylogenetic analysis of cell-cycle regulatory proteins within the Symbiodiniaceae

scientific article published on 24 November 2020

Phylogenetic characterization of transporter proteins in the cnidarian-dinoflagellate symbiosis.

scientific article published on 9 December 2017

Predictive modeling of coral disease distribution within a reef system

scientific article

Preliminary evidence for the microbial loop in Antarctic sea ice using microcosm simulations

scientific article published in 2012

Proteome metabolome and transcriptome data for three Symbiodiniaceae under ambient and heat stress conditions

publication published on 05 April 2022

Proteomics quantifies protein expression changes in a model cnidarian colonised by a thermally tolerant but suboptimal symbiont

scientific article published on 22 May 2019

Proteorhodopsin-bearing bacteria in Antarctic sea ice.

scientific article

Proximate environmental drivers of coral communities at Palmyra Atoll: establishing baselines prior to removing a WWII military causeway.

scientific article

Quantification of virus-like particles suggests viral infection in corals affected by Porites tissue loss

scientific article published on 22 May 2014

Revival of Philozoon Geddes for host-specialized dinoflagellates, ‘zooxanthellae’, in animals from coastal temperate zones of northern and southern hemispheres ⬇️

scientific article published on 28 June 2021

Seasonally Driven Sexual and Asexual Reproduction in Temperate Tethya Species

scientific article published on 21 April 2020

Short-term responses of tropical lagoon sponges to elevated temperature and nitrate

scientific article published on 19 February 2020

Spatial and temporal patterns of scleractinian coral, soft coral, and zoanthid disease on a remote, near-pristine coral reef (Palmyra Atoll, central Pacific)

scientific article published on 01 April 2011

Spatial patterns and regional affinities of coral communities at the Kermadec Islands Marine Reserve, New Zealand—a marginal high-latitude site

article

Species-specific differences in thermal tolerance may define susceptibility to intracellular acidosis in reef corals

scientific article published on 03 February 2015

Stress and death of cnidarian host cells play a role in cnidarian bleaching

scientific article published on 25 April 2013

Sub-cellular imaging shows reduced photosynthetic carbon and increased nitrogen assimilation by the non-native endosymbiont Durusdinium trenchii in the model cnidarian Aiptasia

scientific article published on 26 June 2020

Subcuticular bacteria associated with two common New Zealand echinoderms: Characterization using 16S rRNA sequence analysis and fluorescence in situ hybridization.

scientific article published in February 2010

Successive shifts in the microbial community of the surface mucus layer and tissues of the coral Acropora muricata under thermal stress.

scientific article published on 11 November 2015

Symbiont Identity Impacts the Microbiome and Volatilome of a Model Cnidarian-Dinoflagellate Symbiosis

scientific article published in 2023

Symbiont Identity Influences Patterns of Symbiosis Establishment, Host Growth, and Asexual Reproduction in a Model Cnidarian-Dinoflagellate Symbiosis.

scientific article

Symbiosis induces widespread changes in the proteome of the model cnidarian Aiptasia.

scientific article published on 30 December 2015

THE EFFECTS OF ULTRAVIOLET-B RADIATION ON ANTARCTIC SEA-ICE ALGAE(1).

scientific article published on 28 December 2011

THE SHORT-TERM EFFECT OF IRRADIANCE ON THE PHOTOSYNTHETIC PROPERTIES OF ANTARCTIC FAST-ICE MICROALGAL COMMUNITIES(1).

scientific article

Temporal variability in tropical lagoon sponges from Mauritius (Western Indian Ocean)

scholarly article

Temporal variation in food utilisation by three species of temperate demosponge

article

The Influence of Symbiosis on the Proteome of the Endosymbiont

The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing

scientific article

The Molecular Language of the Cnidarian-Dinoflagellate Symbiosis

scientific article published on 23 September 2020

The effect of elevated temperature and substrate on free-living Symbiodinium cultures

article

The influence of "host release factor" on carbon release by zooxanthellae isolated from fed and starved Aiptasia pallida (Verrill).

scientific article published in June 2001

The physiological response of the deep-sea coral to ocean acidification

article

The scavenger receptor repertoire in six cnidarian species and its putative role in cnidarian-dinoflagellate symbiosis

scientific article published on 15 November 2016

Theory and Application of Pulse Amplitude Modulated Chlorophyll Fluorometry in Coral Health Assessment

article

Thermal Shock Induces Host Proteostasis Disruption and Endoplasmic Reticulum Stress in the Model Symbiotic Cnidarian Aiptasia.

scientific article published on 5 May 2017

Transcriptomic analyses highlight the likely metabolic consequences of colonization of a cnidarian host by native or non-native species ⬇️

scientific article published on 27 March 2019

Transcriptomic characterization of the enzymatic antioxidants FeSOD, MnSOD, APX and KatG in the dinoflagellate genus Symbiodinium

scientific article published on 18 March 2015

Triggers, cascades, and endpoints: connecting the dots of coral bleaching mechanisms

scholarly article published on 12 January 2024

Uptake and Persistence of Homologous and Heterologous Zooxanthellae in the Temperate Sea Anemone Cereus pedunculatus (Pennant)

scientific article published in 1997

Viruses: agents of coral disease?

Water flow buffers shifts in bacterial community structure in heat-stressed Acropora muricata.

scientific article

phylogram: an R package for phylogenetic analysis with nested lists

scientific article published on 22 June 2018

List of works by Simon Davy

13C metabolomics reveals widespread change in carbon fate during coral bleaching

A diverse host thrombospondin-type-1 repeat protein repertoire promotes symbiont colonization during establishment of cnidarian-dinoflagellate symbiosis.

Ammonium excretion by a symbiotic sponge supplies the nitrogen requirements of its rhodophyte partner

An enemy within? Observations of virus-like particles in reef corals.

Antioxidant plasticity and thermal sensitivity in four types of Symbiodinium sp.

Bioeroding sponge assemblages: the importance of substrate availability and sediment

Bleaching and recovery of a phototrophic bioeroding sponge

Building Consensus around the Assessment and Interpretation of Symbiodiniaceae Diversity

Building consensus around the assessment and interpretation of Symbiodiniaceae diversity

Cell biology in model systems as the key to understanding corals

Cell biology of cnidarian-dinoflagellate symbiosis.

Cell wall proteomic analysis of the cnidarian photosymbionts <i>Breviolum minutum</i> and <i>Cladocopium goreaui</i>

Climate Change Alterations to Ecosystem Dominance: How Might Sponge-Dominated Reefs Function?

Climate change alterations to ecosystem dominance: how might sponge-dominated reefs function?

Comparison of the microalgal community within fast ice at two sites along the Ross Sea coast, Antarctica

Coral holobiont cues prime Endozoicomonas for a symbiotic lifestyle

Correction: The scavenger receptor repertoire in six cnidarian species and its putative role in cnidarian-dinoflagellate symbiosis

Correlations between algal abundance, environmental variables and sponge distribution patterns on southern hemisphere temperate rocky reefs

Could some coral reefs become sponge reefs as our climate changes?

Differential ROS Generation in Response to Stress in Symbiodinium spp.

Differential coral bleaching-Contrasting the activity and response of enzymatic antioxidants in symbiotic partners under thermal stress

Differential nitric oxide synthesis and host apoptotic events correlate with bleaching susceptibility in reef corals

Disease dynamics of Porites bleaching with tissue loss: prevalence, virulence, transmission, and environmental drivers.

Early Development and Acquisition of Zooxanthellae in the Temperate Symbiotic Sea Anemone Anthopleura ballii (Cocks)

Effects of host nutritional status and seasonality on the nitrogen status of zooxanthellae in the temperate coral Plesiastrea versipora (Lamarck)

Elucidating the sponge stress response; lipids and fatty acids can facilitate survival under future climate scenarios.

Estimates of particulate organic carbon flowing from the pelagic environment to the benthos through sponge assemblages

Exploratory analysis of Symbiodinium transcriptomes reveals potential latent infection by large dsDNA viruses

Expression patterns of sterol transporters NPC1 and NPC2 in the cnidarian-dinoflagellate symbiosis.

Gross and microscopic morphology of lesions in Cnidaria from Palmyra Atoll, Central Pacific

Growth anomalies on the coral genera Acropora and Porites are strongly associated with host density and human population size across the Indo-Pacific

Hidden diversity in the genus Tethya: comparing molecular and morphological techniques for species identification

High single-cell metabolic activity in Antarctic sea ice bacteria

Histological observations in the Hawaiian reef coral, Porites compressa, affected by Porites bleaching with tissue loss

Horizontal transmission of Symbiodinium cells between adult and juvenile corals is aided by benthic sediment

Host tolerance, not symbiont tolerance, determines the distribution of coral species in relation to their environment at a Central Pacific atoll

In situ responses of the sponge microbiome to ocean acidification

Increased cellular detoxification, cytoskeletal activities and protein transport explain physiological stress in a lagoon sponge

Influence of Symbiont Species on the Glycerol and Glucose Pools in a Model Cnidarian-Dinoflagellate Symbiosis

Influence of canopy-forming algae on temperate sponge assemblages

Influence of environmental variation on symbiotic bacterial communities of two temperate sponges

Influence of local environmental variables on the viral consortia associated with the coral Montipora capitata from Kaneohe Bay, Hawaii, USA

Inter-partner specificity limits the acquisition of thermotolerant symbionts in a model cnidarian-dinoflagellate symbiosis

Interactive effects of temperature and pCO2 on sponges: from the cradle to the grave.

Intra-genomic variation in Symbiodinium correlates negatively with photosynthetic efficiency and coral host performance

Intra-genomic variation in symbiotic dinoflagellates: recent divergence or recombination between lineages?

Intracellular pH and its response to CO2-driven seawater acidification in symbiotic versus non-symbiotic coral cells

Introduction to the proceedings of the 9th International Symbiosis Congress

Latent virus-like infections are present in a diverse range of Symbiodinium spp. (Dinophyta).

Local endemicity and high diversity characterise high-latitude coral–Symbiodinium partnerships

Low functional redundancy in sponges as a result of differential picoplankton use.

Mapping carbon fate during bleaching in a model cnidarian symbiosis: the application of 13 C metabolomics

Menthol-induced bleaching rapidly and effectively provides experimental aposymbiotic sea anemones (Aiptasia sp.) for symbiosis investigations.

Metabolite profiling of symbiont and host during thermal stress and bleaching in a model cnidarian-dinoflagellate symbiosis.

Metabolite profiling of symbiont and host during thermal stress and bleaching in the coral Acropora aspera

Modeling patterns of coral bleaching at a remote Central Pacific atoll

Mucus Sugar Content Shapes the Bacterial Community Structure in Thermally Stressed Acropora muricata

Multi-gene incongruence consistent with hybridisation in Cladocopium (Symbiodiniaceae), an ecologically important genus of coral reef symbionts

Nitric oxide and coral bleaching: is peroxynitrite generation required for symbiosis collapse?

Nitric oxide mediates coral bleaching through an apoptotic-like cell death pathway: evidence from a model sea anemone-dinoflagellate symbiosis

Nitric oxide production and tolerance differ among Symbiodinium types exposed to heat stress

Nutrient utilisation by shallow water temperate sponges in New Zealand

Ocean acidification in New Zealand waters: trends and impacts

Ocean warming and acidification have complex interactive effects on the dynamics of a marine fungal disease.

Optimal nutrient exchange and immune responses operate in partner specificity in the cnidarian-dinoflagellate symbiosis

Partner switching and metabolic flux in a model cnidarian–dinoflagellate symbiosis

Photoacclimation to light-limitation in a clionaid sponge; implications for understanding sponge bioerosion on turbid reefs

Photoacclimatory and photoprotective responses to cold versus heat stress in high latitude reef corals.

Photochemical efficiency and antioxidant capacity in relation to Symbiodinium genotype and host phenotype in a symbiotic cnidarian

Phylogenetic analyses of bacteria in sea ice at Cape Hallett, Antarctica

Phylogenetic analysis of cell-cycle regulatory proteins within the Symbiodiniaceae

Phylogenetic characterization of transporter proteins in the cnidarian-dinoflagellate symbiosis.

Predictive modeling of coral disease distribution within a reef system

Preliminary evidence for the microbial loop in Antarctic sea ice using microcosm simulations

Proteome metabolome and transcriptome data for three Symbiodiniaceae under ambient and heat stress conditions

Proteomics quantifies protein expression changes in a model cnidarian colonised by a thermally tolerant but suboptimal symbiont

Proteorhodopsin-bearing bacteria in Antarctic sea ice.

Proximate environmental drivers of coral communities at Palmyra Atoll: establishing baselines prior to removing a WWII military causeway.

Quantification of virus-like particles suggests viral infection in corals affected by Porites tissue loss