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List of works by Karan Uppal

A SCORE COMPRISED OF NOVEL METABOLITES RELATED TO MYOCARDIAL ENERGETICS IS ASSOCIATED WITH SEX DISPARITIES IN HEART FAILURE OUTCOMES

scholarly article

A metabolomic study of cervical dystonia

scientific article published on 26 November 2020

A precision medicine approach to defining the impact of doxorubicin on the bioenergetic-metabolite interactome in human platelets

scientific article published on 07 September 2019

A scalable workflow to characterize the human exposome

scientific article published on 22 September 2021

Addressing the batch effect issue for LC/MS metabolomics data in data preprocessing

scientific article published on 17 August 2020

Advances in Comprehensive Exposure Assessment: Opportunities for the US Military

scientific article published on 01 December 2019

Air Pollution and Metabolomics in Maternal Serum ⬇️

scholarly article

Analysis of Postdeployment Serum Samples Identifies Potential Biomarkers of Exposure to Burn Pits and Other Environmental Hazards

scientific article published on 01 December 2019

Arginine and Carnitine Metabolites Are Altered in Diabetic Retinopathy

scientific article published on 01 July 2019

Associations of Benzo(ghi)perylene and Heptachlorodibenzo-p-dioxin in Serum of Service Personnel Deployed to Balad, Iraq, and Bagram, Afghanistan Correlates With Perturbed Amino Acid Metabolism in Human Lung Fibroblasts

scientific article published on 01 December 2019

Benzo[a]pyrene Perturbs Mitochondrial and Amino Acid Metabolism in Lung Epithelial Cells and Has Similar Correlations With Metabolic Changes in Human Serum

scientific article published on 01 December 2019

CERC: an interactive content extraction, recognition, and construction tool for clinical and biomedical text

scientific article published on 15 December 2020

Cardiovascular Risk and Resilience Among Black Adults: Rationale and Design of the MECA Study

scientific article published on 28 April 2020

Characterization of plasma thiol redox potential in a common marmoset model of aging.

scientific article published on 18 July 2013

Comparative transcriptomics and metabolomics in a rhesus macaque drug administration study.

scientific article

Computational Metabolomics: A Framework for the Million Metabolome

scientific article published on 14 September 2016

Correction: Metabolic Characterization of the Common Marmoset (Callithrix jacchus).

scientific article published on 22 January 2016

Correlation of the lung microbiota with metabolic profiles in bronchoalveolar lavage fluid in HIV infection

scientific article published on 20 January 2016

Corrigendum to "Plasma metabolomics in adults with cystic fibrosis during a pulmonary exacerbation: A pilot randomized study of high-dose vitamin D3 administration" [Metabolism vol. 70, May 2017, pages 31-41].

scientific article published on 26 April 2017

Defective metabolic programming impairs early neuronal morphogenesis in neural cultures and an organoid model of Leigh syndrome

scientific article published on 26 March 2021

Deployment-Associated Exposure Surveillance With High-Resolution Metabolomics

scientific article

Detection of differentially methylated gene promoters in failing and nonfailing human left ventricle myocardium using computation analysis.

scientific article published on 21 May 2013

Distinct amino acid and lipid perturbations characterize acute versus chronic malaria

scientific article

Distribution of phytochelatins, metal-binding compounds, in plant foods: A survey of commonly consumed fruits, vegetables, grains and legumes

scientific article published on 10 September 2020

Disturbed flow induces systemic changes in metabolites in mouse plasma: a metabolomics study using ApoE⁻/⁻ mice with partial carotid ligation

scientific article

Environmental Chemicals Altered in Association With Deployment for High Risk Areas

scientific article published on 01 December 2019

Hepatic fat is a stronger correlate of key clinical and molecular abnormalities than visceral and abdominal subcutaneous fat in youth

scientific article published on 01 July 2020

High-Resolution Metabolomics Assessment of Military Personnel: Evaluating Analytical Strategies for Chemical Detection.

scientific article published on August 2016

High-Resolution Metabolomics Study Of Occupational Exposure To Trichloroethylene ⬇️

scholarly article

High-Resolution Metabolomics for Nutrition and Health Assessment of Armed Forces Personnel.

scientific article

High-resolution mapping of h1 linker histone variants in embryonic stem cells

scientific article

High-resolution metabolomics of occupational exposure to trichloroethylene

scientific article published on 05 October 2016

High-resolution metabolomics to discover potential parasite-specific biomarkers in a Plasmodium falciparum erythrocytic stage culture system

scientific article

High-resolution plasma metabolomics analysis to detect Mycobacterium tuberculosis-associated metabolites that distinguish active pulmonary tuberculosis in humans

scientific article published in PLoS ONE

Integration of Multi-Omics Data Reveal Dynamic Oxidative Stress Responses to Manganese in Human SH-SY5Y Neuroblastoma Cells

article

Integrative Network Analysis Linking Clinical Outcomes With Environmental Exposures and Molecular Variations in Service Personnel Deployed to Balad and Bagram

scientific article published on 01 December 2019

Local false discovery rate estimation using feature reliability in LC/MS metabolomics data

scientific article

Low-dose cadmium disrupts mitochondrial citric acid cycle and lipid metabolism in mouse lung

scientific article published on 06 December 2018

Low-dose cadmium potentiates lung inflammatory response to 2009 pandemic H1N1 influenza virus in mice

Low-dose cadmium potentiates lung inflammatory response to 2009 pandemic H1N1 influenza virus in mice

scientific article published on 15 April 2019

MaHPIC malaria systems biology data from Plasmodium cynomolgi sporozoite longitudinal infections in macaques

scientific article published in 2022

Manganese Stimulates Putrescine Accumulation and Influences Associated Polyamine, Methionine and Neurotransmitter Metabolism in Human SH-SY5Y Neuroblastoma Cells

scholarly article by Jolyn Fernandes et al published November 2017 in Free Radical Biology and Medicine

Maternal serum metabolome and traffic-related air pollution exposure in pregnancy

scientific article published on 20 June 2019

MetabNet: An R Package for Metabolic Association Analysis of High-Resolution Metabolomics Data.

scientific article

Metabolic Characterization of the Common Marmoset (Callithrix jacchus)

scientific article published on 18 November 2015

Metabolic Consequences of Chronic Alcohol Abuse in Non-Smokers: A Pilot Study

scientific article published on 23 June 2015

Metabolic Pathways and Networks Associated With Tobacco Use in Military Personnel.

scientific article published on August 2016

Metabolic Profiles of Obesity in American Indians: The Strong Heart Family Study

scientific article

Metabolic pathways of lung inflammation revealed by high-resolution metabolomics (HRM) of H1N1 influenza virus infection in mice.

scientific article

Metabolic profiles of biological aging in American Indians: the Strong Heart Family Study

scientific article

Metabolome Wide Association Study and the Exposome: Linking Exposure to Internal Dose, Biological Response and Disease ⬇️

scholarly article

Metabolome-Wide Association Study of Deployment to Balad, Iraq or Bagram, Afghanistan

scientific article published on 01 December 2019

Metabolome-Wide Association Study of Primary Open Angle Glaucoma.

scientific article published in July 2015

Metabolome-wide association study in human platelets for identification of metabolic signatures related to precision medicine

scholarly article

Metabolome-wide association study of neovascular age-related macular degeneration

scientific article

Metabolome-wide association study of phenylalanine in plasma of common marmosets

scientific article

Metabolomic Associations with Serum Bone Turnover Markers

scientific article published on 16 October 2020

Metabolomic Responses to Manganese Dose in SH-SY5Y Human Neuroblastoma Cells

scientific article published on 01 May 2019

Metabolomic and inflammatory responses to in-vehicle traffic pollution in a panel of car commuters ⬇️

scholarly article

Metabolomic assessment of exposure to near-highway ultrafine particles.

scientific article published on 5 December 2018

Metabolomic profiles of plasma, exhaled breath condensate, and saliva are correlated with potential for air toxics detection.

scientific article published on 15 August 2017

Metabolomics Analysis of Aspirin's Effects in Human Colon Tissue and Associations with Adenoma Risk

scientific article published on 12 July 2020

Metabolomics of ADSOL (AS-1) red blood cell storage

scientific article

Metabolomics of fescue toxicosis in grazing beef steers.

scientific article published on 18 April 2017

Metabolomics profile comparisons of irradiated and nonirradiated stored donor red blood cells.

scientific article

Microbial metabolite delta-valerobetaine is a diet-dependent obesogen

scientific article published on 20 December 2021

Mitochondria in precision medicine; linking bioenergetics and metabolomics in platelets

Mitochondrial metabolomics using high-resolution Fourier-transform mass spectrometry

scientific article

Mitochondrial network responses in oxidative physiology and disease

scientific article

Myeloperoxidase oxidation of methionine associates with early cystic fibrosis lung disease

scientific article published on 10 October 2018

N8-Acetylspermidine: A Polyamine Biomarker in Ischemic Cardiomyopathy With Reduced Ejection Fraction

scientific article published on 27 May 2020

Novel metabolic markers for the risk of diabetes development in American Indians.

scientific article

Particulate metal exposures induce plasma metabolome changes in a commuter panel study

scientific article published in PLoS ONE

Perturbations of the arginine metabolome following exposures to traffic-related air pollution in a panel of commuters with and without asthma

scientific article published on 10 April 2019

Phytochelatin database: a resource for phytochelatin complexes of nutritional and environmental metals

scientific article published on 01 January 2019

Pilot Metabolome-Wide Association Study of Benzo(a)pyrene in Serum From Military Personnel.

scientific article

Plasma Metabolomics of Common Marmosets (Callithrix jacchus) to Evaluate Diet and Feeding Husbandry

scientific article published on January 2016

Plasma metabolomics in adults with cystic fibrosis during a pulmonary exacerbation: A pilot randomized study of high-dose vitamin D3 administration.

scientific article published on 11 February 2017

Plasma metabolomics in human pulmonary tuberculosis disease: a pilot study

scientific article

Plasma metabolomics reveals membrane lipids, aspartate/asparagine and nucleotide metabolism pathway differences associated with chloroquine resistance in Plasmodium vivax malaria

scientific article published on 16 August 2017

Putrescine as indicator of manganese neurotoxicity: Dose-response study in human SH-SY5Y cells

scientific article published on 20 April 2018

Reference Standardization for Mass Spectrometry and High-resolution Metabolomics Applications to Exposome Research

scientific article

Reference Standardization for Quantification and Harmonization of Large-Scale Metabolomics

scientific article published on 03 June 2020

Selenium Supplementation Alters Hepatic Energy and Fatty Acid Metabolism in Mice

scientific article published on 01 May 2018

Selenium supplementation prevents metabolic and transcriptomic responses to cadmium in mouse lung

scientific article published on 12 April 2018

Serum metabolomics of slow vs. rapid motor progression Parkinson's disease: a pilot study

scientific article

The Carnitine Shuttle Pathway is Altered in Patients With Neovascular Age-Related Macular Degeneration

scientific article published on 01 October 2018

The Gene Expression Barcode: leveraging public data repositories to begin cataloging the human and murine transcriptomes ⬇️

scientific article published on January 1, 2011

Time-course metabolomic analysis of manganese toxicity reveals biomarkers of oxidative stress and amino acid metabolism as early cellular targets

scholarly article

Transcriptome Analysis Reveals Distinct Responses to Physiologic versus Toxic Manganese Exposure in Human Neuroblastoma Cells

scientific article published on 24 July 2019

Transcriptome-metabolome wide association study (TMWAS) of maneb and paraquat neurotoxicity reveals network level interactions in toxicologic mechanism

scientific article published on 24 July 2014

Untargeted Metabolomics Screen of Mid-pregnancy Maternal Serum and Autism in Offspring

scientific article published on 04 June 2020

Untargeted high-resolution plasma metabolomic profiling predicts outcomes in patients with coronary artery disease

scientific article published on 18 August 2020

Untargeted metabolomics reveal dysregulations in sugar, methionine, and tyrosine pathways in the prodromal state of AD

scientific article published on 11 August 2020

Untargeted metabolomics reveals multiple metabolites influencing smoking-related DNA methylation.

scientific article

Use of Biomarkers to Assess Environmental Exposures and Health Outcomes in Deployed Troops

scientific article published on 01 December 2019

Western diet induces colonic nitrergic myenteric neuropathy and dysmotility in mice via saturated fatty acid- and lipopolysaccharide-induced TLR4 signalling.

scientific article published on 20 December 2016

xMSanalyzer: automated pipeline for improved feature detection and downstream analysis of large-scale, non-targeted metabolomics data

scientific article

xMSannotator: An R Package for Network-Based Annotation of High-Resolution Metabolomics Data.

scientific article

xMWAS: a data-driven integration and differential network analysis tool.

scientific article published on 23 October 2017

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