List of works - Didier Devaurs

3pHLA-score improves structure-based peptide-HLA binding affinity prediction

scholarly article

A Robotics-Inspired Screening Algorithm for Molecular Caging Prediction

scientific article published on 13 March 2020

A multi-tree extension of the transition-based RRT: Application to ordering-and-pathfinding problems in continuous cost spaces

An individual-based evolving predator-prey ecosystem simulation using a fuzzy cognitive map as the behavior model

scientific article

Automatic detection of accommodation steps as an indicator of knowledge maturing

scientific article published in May 2011

Characterizing Energy Landscapes of Peptides Using a Combination of Stochastic Algorithms

scientific article published on 29 April 2015

Coarse-Grained Conformational Sampling of Protein Structure Improves the Fit to Experimental Hydrogen-Exchange Data.

scientific article

Computational analysis of complement inhibitor compstatin using molecular dynamics

scientific article published on 12 August 2020

DINC 2.0: A New Protein-Peptide Docking Webserver Using an Incremental Approach.

scientific article published in November 2017

Defining Low-Dimensional Projections to Guide Protein Conformational Sampling

scientific article published on 28 November 2016

EXPLOITING THE USER INTERACTION CONTEXT FOR AUTOMATIC TASK DETECTION

Efficient Sampling-Based Approaches to Optimal Path Planning in Complex Cost Spaces

article published in 2015

Enhancing the transition-based RRT to deal with complex cost spaces

General Prediction of Peptide-MHC Binding Modes Using Incremental Docking: A Proof of Concept

scientific article published on 12 March 2018

HLA-Arena: A Customizable Environment for the Structural Modeling and Analysis of Peptide-HLA Complexes for Cancer Immunotherapy

scientific article published on 01 July 2020

Improving protein conformational sampling by using guiding projections

MoMA-LigPath: a web server to simulate protein-ligand unbinding

scientific article published on 13 May 2013

Motion Planning for 6-D Manipulation with Aerial Towed-cable Systems

article published in 2013

Native State of Complement Protein C3d Analysed via Hydrogen Exchange and Conformational Sampling

scientific article published on 24 March 2018

Optimal Path Planning in Complex Cost Spaces With Sampling-Based Algorithms

Parallelizing RRT on Large-Scale Distributed-Memory Architectures

Parallelizing RRT on distributed-memory architectures

Revealing Unknown Protein Structures Using Computational Conformational Sampling Guided by Experimental Hydrogen-Exchange Data

scientific article published on 31 October 2018

Sampling-based methods for a full characterization of energy landscapes of small peptides

Species abundance patterns in an ecosystem simulation studied through Fisher’s logseries

Structure-based Methods for Binding Mode and Binding Affinity Prediction for Peptide-MHC Complexes

scientific article published on 01 January 2018

Studying the Factors Influencing Automatic User Task Detection on the Computer Desktop

UICO

Understanding the challenges of protein flexibility in drug design.

scientific article published on 28 September 2015

Using parallelized incremental meta-docking can solve the conformational sampling issue when docking large ligands to proteins

scientific article published on 05 September 2019

List of works by Didier Devaurs