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List of works by Igor V Pivkin

A canonical replica exchange molecular dynamics implementation with normal pressure in each replica

scientific article published in July 2016

A comparative study between dissipative particle dynamics and molecular dynamics for simple- and complex-geometry flows.

scientific article published in September 2005

A kMC-MD method with generalized move-sets for the simulation of folding of α-helical and β-stranded peptides

scientific article

A microfabricated deformability-based flow cytometer with application to malaria.

scientific article

A polarizable coarse-grained protein model for dissipative particle dynamics

scientific article published on 04 September 2015

Accurate coarse-grained modeling of red blood cells

scientific article published on 12 September 2008

Biomechanics of red blood cells in human spleen and consequences for physiology and disease

scientific article published on 27 June 2016

Blood flow velocity effects and role of activation delay time on growth and form of platelet thrombi

scientific article

Coarse kMC-based replica exchange algorithms for the accelerated simulation of protein folding in explicit solvent

scientific article

Coarse-graining limits in open and wall-bounded dissipative particle dynamics systems.

scientific article published in May 2006

Combined effects of pulsatile flow and dynamic curvature on wall shear stress in a coronary artery bifurcation model.

scientific article published in June 2005

Combined simulation and experimental study of large deformation of red blood cells in microfluidic systems.

scientific article

Controlling density fluctuations in wall-bounded dissipative particle dynamics systems.

scientific article published on 26 May 2006

Effect of red blood cells on platelet aggregation

scientific article published in March 2009

How water layers on graphene affect folding and adsorption of TrpZip2.

scientific article published on December 2014

Inflow/Outflow Boundary Conditions for Particle-Based Blood Flow Simulations: Application to Arterial Bifurcations and Trees

scientific article

Lipid bilayer and cytoskeletal interactions in a red blood cell

scientific article published on 29 July 2013

Multiscale modelling of hematologic disorders

Particle flurries: synoptic 3D pulsatile flow visualization.

scientific article published in March 2004

Probing eukaryotic cell mechanics via mesoscopic simulations.

scientific article published on 18 September 2017

S100A4 and its role in metastasis – computational integration of data on biological networks

scientific article

S100A4 and its role in metastasis – simulations of knockout and amplification of epithelial growth factor receptor and matrix metalloproteinases

scientific article published on July 2015

Simulation and visualization of flow around bat wings during flight

scholarly article published 2004

Structure and response to flow of the glycocalyx layer

scientific article published on January 2014

The Fluid Mechanics of Cancer and Its Therapy

The SIB Swiss Institute of Bioinformatics' resources: focus on curated databases

scientific article (publication date: 4 January 2016)

The in-silico lab-on-a-chip

Visualization of blood platelets in a virtual environment

scholarly article published 2004

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