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List of works by Samir Bhatt

A database for the epidemic trends and control measures during the first wave of COVID-19 in mainland China

scientific article published on 29 October 2020

A global map of travel time to cities to assess inequalities in accessibility in 2015.

scientific article published on 10 January 2018

A sub-national analysis of the rate of transmission of COVID-19 in Italy

scientific article published on 09 May 2020

Air temperature suitability for Plasmodium falciparum malaria transmission in Africa 2000-2012: a high-resolution spatiotemporal prediction

scientific article

An effective approach for gap-filling continental scale remotely sensed time-series

scientific article

Assessing transmissibility of SARS-CoV-2 lineage B.1.1.7 in England

scientific article published on 25 March 2021

Associated patterns of insecticide resistance in field populations of malaria vectors across Africa.

scientific article

Causal Inference in Spatial Mapping

scientific article published on 03 July 2019

Comparative analysis of the risks of hospitalisation and death associated with SARS-CoV-2 omicron (B.1.1.529) and delta (B.1.617.2) variants in England: a cohort study

Correction: Quantifying Online News Media Coverage of the COVID-19 Pandemic: Text Mining Study and Resource

scientific article published in 2021

Correction: Quantifying the contribution of Plasmodium falciparum malaria to febrile illness amongst African children.

scientific article published on 16 May 2018

Coverage and system efficiencies of insecticide-treated nets in Africa from 2000 to 2017.

scientific article published on 29 December 2015

Declining malaria in Africa: improving the measurement of progress

scientific article

Defining the geographical range of the Plasmodium knowlesi reservoir

scientific article

Defining the relationship between infection prevalence and clinical incidence of Plasmodium falciparum malaria

scientific article

Detecting natural selection in RNA virus populations using sequence summary statistics

scientific article published on 11 June 2009

Effectiveness of social distancing measures and lockdowns for reducing transmission of COVID-19 in non-healthcare, community-based settings

scientific article published on 24 August 2023

Estimating Geographical Variation in the Risk of Zoonotic Plasmodium knowlesi Infection in Countries Eliminating Malaria

scientific article

Estimating reassortment rates in co-circulating Eurasian swine influenza viruses

scientific article published on 12 September 2012

Estimating spatiotemporally varying malaria reproduction numbers in a near elimination setting.

scientific article

Estimating the burden of α-thalassaemia in Thailand using a comprehensive prevalence database for Southeast Asia

scientific article published on 23 May 2019

Estimating the effects of non-pharmaceutical interventions on COVID-19 in Europe

scientific article published on 08 June 2020

Evidence of initial success for China exiting COVID-19 social distancing policy after achieving containment

scientific article published on 28 April 2020

Evolution and epidemic spread of SARS-CoV-2 in Brazil

preprint article published on 12 June 2020

Faster Adaptation in Smaller Populations: Counterintuitive Evolution of HIV during Childhood Infection

scientific article published on 7 January 2016

Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil

scientific article

Geographical distributions of African malaria vector sibling species and evidence for insecticide resistance

scientific article published on 20 February 2017

Geographical variation in Plasmodium vivax relapse

scientific article

Global distribution maps of the leishmaniases

scientific article

Global investment targets for malaria control and elimination between 2016 and 2030.

scientific article published on 16 May 2017

Global mapping of infectious disease

scientific article published on 04 February 2013

Global maps of travel time to healthcare facilities

scientific article published on 28 September 2020

Global spread of dengue virus types: mapping the 70 year history

scientific article

Global, regional, and national age-sex-specific mortality and life expectancy, 1950–2017: a systematic analysis for the Global Burden of Disease Study 2017

scientific article published in The Lancet

Global, regional, and national comparative risk assessment of 79 behavioural, environmental and occupational, and metabolic risks or clusters of risks, 1990-2015: a systematic analysis for the Global Burden of Disease Study 2015.

scientific article

Global, regional, and national disability-adjusted life-years (DALYs) for 315 diseases and injuries and healthy life expectancy (HALE), 1990-2015: a systematic analysis for the Global Burden of Disease Study 2015.

scientific article published in October 2016

Global, regional, and national incidence, prevalence, and years lived with disability for 310 diseases and injuries, 1990-2015: a systematic analysis for the Global Burden of Disease Study 2015 ⬇️

scientific article

Global, regional, national, and selected subnational levels of stillbirths, neonatal, infant, and under-5 mortality, 1980-2015: a systematic analysis for the Global Burden of Disease Study 2015.

scientific article

Have deaths from COVID-19 in Europe plateaued due to herd immunity?

scientific article published on 11 June 2020

Host or pathogen-related factors in COVID-19 severity? - Authors' reply

scientific article published on 01 October 2020

Housing and child health in sub-Saharan Africa: A cross-sectional analysis

scientific article published on 23 March 2020

Identifying residual hotspots and mapping lower respiratory infection morbidity and mortality in African children from 2000 to 2017

scientific article published on 30 September 2019

Improved prediction accuracy for disease risk mapping using Gaussian process stacked generalization

scientific article published on September 2017

Indirect effects of the COVID-19 pandemic on malaria intervention coverage, morbidity, and mortality in Africa: a geospatial modelling analysis

scientific article published on 21 September 2020

Inference of COVID-19 epidemiological distributions from Brazilian hospital data

scientific article published on 25 November 2020

Leaping through Tree Space: Continuous Phylogenetic Inference for Rooted and Unrooted Trees

scientific article published in December 2023

Local, national, and regional viral haemorrhagic fever pandemic potential in Africa: a multistage analysis

scientific article published on 11 October 2017

Malaria eradication within a generation: ambitious, achievable, and necessary

scientific article published on 08 September 2019

Mapping Plasmodium falciparum Mortality in Africa between 1990 and 2015

scientific article (publication date: 10 October 2016)

Mapping changes in housing in sub-Saharan Africa from 2000 to 2015

scientific article published on 27 March 2019

Mapping child growth failure in Africa between 2000 and 2015.

scientific article published in February 2018

Mapping diphtheria-pertussis-tetanus vaccine coverage in Africa, 2000-2016: a spatial and temporal modelling study

scientific article published on 05 April 2019

Mapping local variation in educational attainment across Africa.

scientific article published in February 2018

Mapping malaria seasonality in Madagascar using health facility data

scientific article published on 10 February 2020

Mapping the global endemicity and clinical burden of Plasmodium vivax, 2000-17: a spatial and temporal modelling study

scientific article published on 19 June 2019

Mapping the global prevalence, incidence, and mortality of Plasmodium falciparum, 2000-17: a spatial and temporal modelling study

scientific article published on 19 June 2019

Mapping the zoonotic niche of Ebola virus disease in Africa

scientific article

Mapping trends in insecticide resistance phenotypes in African malaria vectors

scientific article published on 25 June 2020

Mapping under-5 and neonatal mortality in Africa, 2000-15: a baseline analysis for the Sustainable Development Goals

scientific article published on 25 September 2017

Measuring the health-related Sustainable Development Goals in 188 countries: a baseline analysis from the Global Burden of Disease Study 2015.

scientific article published on 21 September 2016

Modelling adult Aedes aegypti and Aedes albopictus survival at different temperatures in laboratory and field settings

scientific article (publication date: 12 December 2013)

Modelling the impact of larviciding on the population dynamics and biting rates of Simulium damnosum (s.l.): implications for vector control as a complementary strategy for onchocerciasis elimination in Africa.

scientific article

Mosquito feeding behavior and how it influences residual malaria transmission across Africa

scientific article published on 08 July 2019

Multimodal deep learning from satellite and street-level imagery for measuring income, overcrowding, and environmental deprivation in urban areas

scientific article published on 01 May 2021

Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic

scientific article (publication date: 25 June 2009)

Population coverage of artemisinin-based combination treatment in children younger than 5 years with fever and Plasmodium falciparum infection in Africa, 2003-2015: a modelling study using data from national surveys

scientific article

Potential for reduction of burden and local elimination of malaria by reducing Plasmodium falciparum malaria transmission: a mathematical modelling study

scientific article published on 19 January 2016

Potential impact of the COVID-19 pandemic on HIV, tuberculosis, and malaria in low-income and middle-income countries: a modelling study

scientific article published on 13 July 2020

Predicting the risk of avian influenza A H7N9 infection in live-poultry markets across Asia

scientific article

Purifying Selection Determines the Short-Term Time Dependency of Evolutionary Rates in SARS-CoV-2 and pH1N1 Influenza

scientific article published in 2022

Pyfectious: An individual-level simulator to discover optimal containment policies for epidemic diseases

scientific article published in 2023

Quantifying Changes in Vaccine Coverage in Mainstream Media as a Result of the COVID-19 Outbreak: Text Mining Study

scientific article published in 2022

Quantifying Online News Media Coverage of the COVID-19 Pandemic: Text Mining Study and Resource

scientific article published in 2021

Quantifying the contribution of Plasmodium falciparum malaria to febrile illness amongst African children.

scientific article published on 16 October 2017

Re-examining environmental correlates of Plasmodium falciparum malaria endemicity: a data-intensive variable selection approach

scientific article

Reduction in mobility and COVID-19 transmission

scholarly article by Pierre Nouvellet published in 2021

Refining the global spatial limits of dengue virus transmission by evidence-based consensus

scientific article

Reply to: The effect of interventions on COVID-19

scientific article published on 01 December 2020

Report 21: Estimating COVID-19 cases and reproduction number in Brazil

scientific article published on 18 May 2020

Response to COVID-19 in South Korea and implications for lifting stringent interventions

scientific article published on 09 October 2020

SARS-CoV-2 infection prevalence on repatriation flights from Wuhan City, China

scientific article published on 24 August 2020

Seasonal variation in SARS-CoV-2 transmission in temperate climates: A Bayesian modelling study in 143 European regions

scientific article published in 2022

Spatial analysis made easy with linear regression and kernels

scientific article published on 21 August 2019

Spatial and temporal fluctuations in COVID-19 fatality rates in Brazilian hospitals

scientific article published in 2022

Spatial mapping with Gaussian processes and nonstationary Fourier features

scientific article published on 01 December 2018

Spectrum-Malaria: a user-friendly projection tool for health impact assessment and strategic planning by malaria control programmes in sub-Saharan Africa.

scientific article

Standardizing Plasmodium falciparum infection prevalence measured via microscopy versus rapid diagnostic test

scientific article published on 17 November 2015

State-level tracking of COVID-19 in the United States

scientific article published on 03 December 2020

Targeting the right interventions to the right people and places: the role of geospatial analysis in HIV program planning.

scientific article published in May 2018

The changing landscape of Plasmodium falciparum drug resistance in the Democratic Republic of Congo

scientific article published on 22 October 2019

The contribution of non-malarial febrile illness co-infections to Plasmodium falciparum case counts in health facilities in sub-Saharan Africa.

scientific article published on 11 June 2019

The distribution of haemoglobin C and its prevalence in newborns in Africa

scientific article

The effect of malaria control on Plasmodium falciparum in Africa between 2000 and 2015

scientific article

The evolutionary dynamics of influenza A virus adaptation to mammalian hosts.

scientific article published on 04 February 2013

The global distribution and burden of dengue

scientific article

The impact of COVID-19 and strategies for mitigation and suppression in low- and middle-income countries

scientific article

The spatial epidemiology of sickle-cell anaemia in India

scientific article published in Scientific Reports

Tracking progress towards malaria elimination in China: Individual-level estimates of transmission and its spatiotemporal variation using a diffusion network approach

scientific article published on 23 March 2020

Transmission of SARS-CoV-2 Lineage B.1.1.7 in England: Insights from linking epidemiological and genetic data

scientific article

Treatment-seeking rates in malaria endemic countries

scientific article published on 11 January 2016

Updates to the zoonotic niche map of Ebola virus disease in Africa

scientific article published on 14 July 2016

Utilizing general human movement models to predict the spread of emerging infectious diseases in resource poor settings

scientific article published on 26 March 2019

Variation in Childhood Diarrheal Morbidity and Mortality in Africa, 2000-2015

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