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List of works by Surendra Kumar

AIR: A batch-oriented web program package for construction of supermatrices ready for phylogenomic analyses

scientific article

Associations between clinical symptoms, plasma norepinephrine and deregulated immune gene networks in subgroups of adolescent with Chronic Fatigue Syndrome

scientific article published on 09 November 2018

BIR Pipeline for Preparation of Phylogenomic Data

scientific article

BLAST output visualization in the new sequencing era.

scientific article

BLASTGrabber: a bioinformatic tool for visualization, analysis and sequence selection of massive BLAST data

scientific article

CLOTU: An online pipeline for processing and clustering of 454 amplicon reads into OTUs followed by taxonomic annotation ⬇️

scientific article published on May 20, 2011

Changes in the root-associated fungal communities along a primary succession gradient analysed by 454 pyrosequencing

scientific article published on 01 April 2012

Environmental microbiology through the lens of high-throughput DNA sequencing: synopsis of current platforms and bioinformatics approaches

scientific article published on 28 July 2012

Expression of an estrogen-regulated variant transcript of the peroxisomal branched chain fatty acid oxidase ACOX2 in breast carcinomas

scientific article published on 17 July 2015

High consistency between replicate 454 pyrosequencing analyses of ectomycorrhizal plant root samples ⬇️

scientific article published on July 16, 2011

ITS1 versus ITS2 as DNA metabarcodes for fungi

scientific article published on 25 January 2013

Identification of a Natural Killer Cell Receptor Allele That Prolongs Survival of Cytomegalovirus-Positive Glioblastoma Patients.

scientific article published on 12 July 2016

Large-scale phylogenomic analyses reveal that two enigmatic protist lineages, telonemia and centroheliozoa, are related to photosynthetic chromalveolates

scientific article

Noninvasive profiling of serum cytokines in breast cancer patients and clinicopathological characteristics

scientific article published on 05 November 2018

Profiling the transcriptome response of Atlantic salmon head kidney to formalin-killed Renibacterium salmoninarum

scientific article published on 23 November 2019

Toward Personalized Computer Simulation of Breast Cancer Treatment: A Multiscale Pharmacokinetic and Pharmacodynamic Model Informed by Multitype Patient Data

scientific article published on 22 May 2019

Transcriptome Profiling of Atlantic Salmon Adherent Head Kidney Leukocytes Reveals That Macrophages Are Selectively Enriched During Culture

scientific article published on 16 August 2021

Transcriptomic Profiling in Fins of Atlantic Salmon Parasitized with Sea Lice: Evidence for an Early Imbalance Between Chalimus-Induced Immunomodulation and the Host's Defense Response

scientific article published on 31 March 2020

Widespread alternative exon usage in clinically distinct subtypes of Invasive Ductal Carcinoma

scientific article

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