List of works - Giovanna Ambrosini

A gene-rich, transcriptionally active environment and the pre-deposition of repressive marks are predictive of susceptibility to KRAB/KAP1-mediated silencing.

scientific article

Critical assessment of automated flow cytometry data analysis techniques.

scientific article

EPD and EPDnew, high-quality promoter resources in the next-generation sequencing era

scientific article

Indexing strategies for rapid searches of short words in genome sequences.

scientific article

Intraductal xenografts show lobular carcinoma cells rely on their own extracellular matrix and LOXL1

scientific article published on 22 February 2021

KRAB-zinc finger proteins and KAP1 can mediate long-range transcriptional repression through heterochromatin spreading

scientific article

MGA repository: a curated data resource for ChIP-seq and other genome annotated data

scientific article published on 24 October 2017

Nuclear Factor I genomic binding associates with chromatin boundaries

scientific article

Nuclear factor I revealed as family of promoter binding transcription activators

scientific article

Nucleosome eviction from MHC class II promoters controls positioning of the transcription start site.

scientific article published on 05 March 2009

PWMScan: a fast tool for scanning entire genomes with a position-specific weight matrix

scientific article published on 01 July 2018

SMiLE-seq identifies binding motifs of single and dimeric transcription factors

scientific article published on 16 January 2017

SNP2TFBS - a database of regulatory SNPs affecting predicted transcription factor binding site affinity

scientific article

Signal search analysis server

scientific article

The ChIP-Seq tools and web server: a resource for analyzing ChIP-seq and other types of genomic data

scientific article

The Eukaryotic Promoter Database: expansion of EPDnew and new promoter analysis tools

scientific article

The SIB Swiss Institute of Bioinformatics' resources: focus on curated databases

scientific article (publication date: 4 January 2016)

The eukaryotic promoter database in its 30th year: focus on non-vertebrate organisms

scientific article

ZFN-site searches genomes for zinc finger nuclease target sites and off-target sites. ⬇️

scientific article

List of works by Giovanna Ambrosini

A gene-rich, transcriptionally active environment and the pre-deposition of repressive marks are predictive of susceptibility to KRAB/KAP1-mediated silencing.

Critical assessment of automated flow cytometry data analysis techniques.

EPD and EPDnew, high-quality promoter resources in the next-generation sequencing era

Indexing strategies for rapid searches of short words in genome sequences.

Intraductal xenografts show lobular carcinoma cells rely on their own extracellular matrix and LOXL1

KRAB-zinc finger proteins and KAP1 can mediate long-range transcriptional repression through heterochromatin spreading

MGA repository: a curated data resource for ChIP-seq and other genome annotated data

Nuclear Factor I genomic binding associates with chromatin boundaries

Nuclear factor I revealed as family of promoter binding transcription activators

Nucleosome eviction from MHC class II promoters controls positioning of the transcription start site.

PWMScan: a fast tool for scanning entire genomes with a position-specific weight matrix

SMiLE-seq identifies binding motifs of single and dimeric transcription factors

SNP2TFBS - a database of regulatory SNPs affecting predicted transcription factor binding site affinity

Signal search analysis server

The ChIP-Seq tools and web server: a resource for analyzing ChIP-seq and other types of genomic data

The Eukaryotic Promoter Database: expansion of EPDnew and new promoter analysis tools

The SIB Swiss Institute of Bioinformatics' resources: focus on curated databases

The eukaryotic promoter database in its 30th year: focus on non-vertebrate organisms

ZFN-site searches genomes for zinc finger nuclease target sites and off-target sites. ⬇️