List of works - Zackary I Johnson

A Gulf Stream frontal eddy harbors a distinct microbiome compared to adjacent waters

scientific article published in 2023

A High-Resolution Time Series Reveals Distinct Seasonal Patterns of Planktonic Fungi at a Temperate Coastal Ocean Site (Beaufort, North Carolina, USA)

scientific article published on 17 October 2018

A suite of microplate reader-based colorimetric methods to quantify ammonium, nitrate, orthophosphate and silicate concentrations for aquatic nutrient monitoring ⬇️

scientific article published on 06 December 2010

Abundance and Genetic Diversity of Aerobic Anoxygenic Phototrophic Bacteria of Coastal Regions of the Pacific Ocean ⬇️

scientific article published on February 3, 2012

Abundance and Molecular Diversity of Thraustochytrids in Coastal Waters of Southern China

scientific article published on 18 May 2017

Acidification in the U.S. Southeast: Causes, Potential Consequences and the Role of the Southeast Ocean and Coastal Acidification Network

scientific article published on 01 July 2020

Air-water fluxes of N₂O and CH₄ during microalgae (Staurosira sp.) cultivation in an open raceway pond.

scientific article published on 11 September 2012

Annual Partitioning Patterns of Labyrinthulomycetes Reveal Their Multifaceted Role in Marine Microbial Food Webs

scientific article published on 23 October 2020

Annual community patterns are driven by seasonal switching between closely related marine bacteria

scientific article

Annual community patterns are driven by seasonal switching between closely related marine bacteria

scientific article published on 01 November 2017

Carbon allocation under light and nitrogen resource gradients in two model marine phytoplankton(1).

scientific article

Choreography of the transcriptome, photophysiology, and cell cycle of a minimal photoautotroph, prochlorococcus

scientific article

Concrete Island: Lost Sites and Hidden Heritage

2017 master's thesis by Zackary Johnson at Victoria University of Wellington

Contrasting seasonal drivers of virus abundance and production in the North Pacific Ocean

scientific article published on 7 September 2017

Decarbonizing agriculture through the conversion of animal manure to dietary protein and ammonia fertilizer

scientific article published on 02 December 2019

Degradation of hydrogen peroxide at the ocean's surface: the influence of the microbial community on the realized thermal niche of Prochlorococcus.

scientific article

Dependence of the cyanobacterium Prochlorococcus on hydrogen peroxide scavenging microbes for growth at the ocean's surface.

scientific article

Distribution and diversity of planktonic fungi in the West Pacific Warm Pool

scientific article published in 2014

Dramatic variability of the carbonate system at a temperate coastal ocean site (Beaufort, North Carolina, USA) is regulated by physical and biogeochemical processes on multiple timescales

scientific article (publication date: 2013)

Environmental stability impacts the differential sensitivity of marine microbiomes to increases in temperature and acidity

scientific article published on 04 September 2020

Facilitation of robust growth of Prochlorococcus colonies and dilute liquid cultures by "helper" heterotrophic bacteria.

scientific article published on 23 May 2008

Genomes and gene expression across light and productivity gradients in eastern subtropical Pacific microbial communities

scientific article published on 21 October 2014

Global gene expression of Prochlorococcus ecotypes in response to changes in nitrogen availability

scientific article

High phylogenetic diversity and abundance pattern of Labyrinthulomycete protists in the coastal waters of the Bohai Sea

scientific article published on 30 August 2018

In situ activity of a dominant Prochlorococcus ecotype (eHL-II) from rRNA content and cell size.

scientific article published on 13 May 2013

Insensitivity of Diverse and Temporally Variable Particle-Associated Microbial Communities to Bulk Seawater Environmental Parameters

scientific article

Light-driven synchrony of Prochlorococcus growth and mortality in the subtropical Pacific gyre

scientific article published on 15 June 2015

Marine Microalgae: Climate, Energy, and Food Security from the Sea

scientific article published in 2016

Microbial communities across nearshore to offshore coastal transects are primarily shaped by distance and temperature

scientific article published on 25 July 2019

Molecular characterization of the spatial diversity and novel lineages of mycoplankton in Hawaiian coastal waters

scientific article published on 30 July 2009

Niche partitioning among Prochlorococcus ecotypes along ocean-scale environmental gradients

scientific article published in March 2006

Niche partitioning and biogeography of high light adapted Prochlorococcus across taxonomic ranks in the North Pacific.

scientific article published on 22 January 2016

Pervasive iron limitation at subsurface chlorophyll maxima of the California Current

article published in the Proceedings of the National Academy of Sciences of the United States of America

Photosynthesis genes in marine viruses yield proteins during host infection

scientific article

Photosynthetic maximum quantum yield increases are an essential component of the Southern Ocean phytoplankton response to iron

scholarly article

Prochlorococcus ecotype abundances in the North Atlantic Ocean as revealed by an improved quantitative PCR method

scientific article published in January 2006

Prochlorococcus: approved for export

scientific article published on 24 June 2009

Properties of overlapping genes are conserved across microbial genomes

scientific article

Protistan plankton communities in the Galápagos Archipelago respond to changes in deep water masses resulting from the 2015/16 El Niño

scientific article published in 2021

Rapid changes in coastal ocean microbiomes uncoupled with shifts in environmental variables

scientific article published on 18 June 2022

Relationship between abundance and specific activity of bacterioplankton in open ocean surface waters

scientific article

Reused Cultivation Water Accumulates Dissolved Organic Carbon and Uniquely Influences Different Marine Microalgae

scientific article published on 14 May 2019

Seasonal influence of scallop culture on nutrient flux, bacterial pathogens and bacterioplankton diversity across estuaries off the Bohai Sea Coast of Northern China.

scientific article published on 2 August 2017

Southern Ocean iron enrichment experiment: carbon cycling in high- and low-Si waters

scientific article

Techniques for quantifying phytoplankton biodiversity

scientific article

The Impact of Gulf Stream Frontal Eddies on Ecology and Biogeochemistry near Cape Hatteras

scientific article published on 23 February 2023

The challenges of detecting and attributing ocean acidification impacts on marine ecosystems

scientific article

The low-light reduction in the quantum yield of photosynthesis: potential errors and biases when calculating the maximum quantum yield

scientific article published in January 2003

The ocean sampling day consortium

scientific article published in 2015

Thermally adaptive tradeoffs in closely related marine bacterial strains.

scientific article published on 27 January 2015

Transfer of photosynthesis genes to and from Prochlorococcus viruses

scientific article

Transforming the Future of Marine Aquaculture: A Circular Economy Approach

scientific article published in 2022

Variable but persistent coexistence of Prochlorococcus ecotypes along temperature gradients in the ocean's surface mixed layer

scientific article published on 7 January 2016

Viral and bacterial abundance and production in the Western Pacific Ocean and the relation to other oceanic realms

scientific article published in November 2011

List of works by Zackary I Johnson

A Gulf Stream frontal eddy harbors a distinct microbiome compared to adjacent waters

A High-Resolution Time Series Reveals Distinct Seasonal Patterns of Planktonic Fungi at a Temperate Coastal Ocean Site (Beaufort, North Carolina, USA)

A suite of microplate reader-based colorimetric methods to quantify ammonium, nitrate, orthophosphate and silicate concentrations for aquatic nutrient monitoring ⬇️

Abundance and Genetic Diversity of Aerobic Anoxygenic Phototrophic Bacteria of Coastal Regions of the Pacific Ocean ⬇️

Abundance and Molecular Diversity of Thraustochytrids in Coastal Waters of Southern China

Acidification in the U.S. Southeast: Causes, Potential Consequences and the Role of the Southeast Ocean and Coastal Acidification Network

Air-water fluxes of N₂O and CH₄ during microalgae (Staurosira sp.) cultivation in an open raceway pond.

Annual Partitioning Patterns of Labyrinthulomycetes Reveal Their Multifaceted Role in Marine Microbial Food Webs

Annual community patterns are driven by seasonal switching between closely related marine bacteria

Annual community patterns are driven by seasonal switching between closely related marine bacteria

Carbon allocation under light and nitrogen resource gradients in two model marine phytoplankton(1).

Choreography of the transcriptome, photophysiology, and cell cycle of a minimal photoautotroph, prochlorococcus

Concrete Island: Lost Sites and Hidden Heritage

Contrasting seasonal drivers of virus abundance and production in the North Pacific Ocean

Decarbonizing agriculture through the conversion of animal manure to dietary protein and ammonia fertilizer

Degradation of hydrogen peroxide at the ocean's surface: the influence of the microbial community on the realized thermal niche of Prochlorococcus.

Dependence of the cyanobacterium Prochlorococcus on hydrogen peroxide scavenging microbes for growth at the ocean's surface.

Distribution and diversity of planktonic fungi in the West Pacific Warm Pool

Dramatic variability of the carbonate system at a temperate coastal ocean site (Beaufort, North Carolina, USA) is regulated by physical and biogeochemical processes on multiple timescales

Environmental stability impacts the differential sensitivity of marine microbiomes to increases in temperature and acidity

Facilitation of robust growth of Prochlorococcus colonies and dilute liquid cultures by "helper" heterotrophic bacteria.

Genomes and gene expression across light and productivity gradients in eastern subtropical Pacific microbial communities

Global gene expression of Prochlorococcus ecotypes in response to changes in nitrogen availability

High phylogenetic diversity and abundance pattern of Labyrinthulomycete protists in the coastal waters of the Bohai Sea

In situ activity of a dominant Prochlorococcus ecotype (eHL-II) from rRNA content and cell size.

Insensitivity of Diverse and Temporally Variable Particle-Associated Microbial Communities to Bulk Seawater Environmental Parameters

Light-driven synchrony of Prochlorococcus growth and mortality in the subtropical Pacific gyre

Marine Microalgae: Climate, Energy, and Food Security from the Sea

Microbial communities across nearshore to offshore coastal transects are primarily shaped by distance and temperature

Molecular characterization of the spatial diversity and novel lineages of mycoplankton in Hawaiian coastal waters

Niche partitioning among Prochlorococcus ecotypes along ocean-scale environmental gradients

Niche partitioning and biogeography of high light adapted Prochlorococcus across taxonomic ranks in the North Pacific.

Pervasive iron limitation at subsurface chlorophyll maxima of the California Current

Photosynthesis genes in marine viruses yield proteins during host infection

Photosynthetic maximum quantum yield increases are an essential component of the Southern Ocean phytoplankton response to iron

Prochlorococcus ecotype abundances in the North Atlantic Ocean as revealed by an improved quantitative PCR method

Prochlorococcus: approved for export

Properties of overlapping genes are conserved across microbial genomes

Protistan plankton communities in the Galápagos Archipelago respond to changes in deep water masses resulting from the 2015/16 El Niño

Rapid changes in coastal ocean microbiomes uncoupled with shifts in environmental variables

Relationship between abundance and specific activity of bacterioplankton in open ocean surface waters

Reused Cultivation Water Accumulates Dissolved Organic Carbon and Uniquely Influences Different Marine Microalgae

Seasonal influence of scallop culture on nutrient flux, bacterial pathogens and bacterioplankton diversity across estuaries off the Bohai Sea Coast of Northern China.

Southern Ocean iron enrichment experiment: carbon cycling in high- and low-Si waters

Techniques for quantifying phytoplankton biodiversity

The Impact of Gulf Stream Frontal Eddies on Ecology and Biogeochemistry near Cape Hatteras

The challenges of detecting and attributing ocean acidification impacts on marine ecosystems

The low-light reduction in the quantum yield of photosynthesis: potential errors and biases when calculating the maximum quantum yield

The ocean sampling day consortium

Thermally adaptive tradeoffs in closely related marine bacterial strains.

Transfer of photosynthesis genes to and from Prochlorococcus viruses

Transforming the Future of Marine Aquaculture: A Circular Economy Approach

Variable but persistent coexistence of Prochlorococcus ecotypes along temperature gradients in the ocean's surface mixed layer

Viral and bacterial abundance and production in the Western Pacific Ocean and the relation to other oceanic realms