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List of works by Jules Jacobsen

A mouse informatics platform for phenotypic and translational discovery.

scientific article

Applying the ARRIVE Guidelines to an In Vivo Database

scientific article

BioJava: an open-source framework for bioinformatics in 2012

scientific article

Computational evaluation of exome sequence data using human and model organism phenotypes improves diagnostic efficiency.

scientific article

Disease insights through cross-species phenotype comparisons

scientific article

Disease model discovery from 3,328 gene knockouts by The International Mouse Phenotyping Consortium.

scientific article published on 26 June 2017

From protein sequences to 3D-structures and beyond: the example of the UniProt knowledgebase

scientific article

GA4GH: International policies and standards for data sharing across genomic research and healthcare

scientific article published on 10 November 2021

Interpretable Clinical Genomics with a Likelihood Ratio Paradigm

scientific article published on 29 July 2020

Navigating the Phenotype Frontier: The Monarch Initiative

scientific article

Ongoing and future developments at the Universal Protein Resource

scientific article

Phenopolis: an open platform for harmonization and analysis of genetic and phenotypic data.

scientific article

Reorganizing the protein space at the Universal Protein Resource (UniProt)

scientific article (publication date: 2012)

SIFTS: Structure Integration with Function, Taxonomy and Sequences resource

scientific article (publication date: 2013)

The Catalytic Site Atlas 2.0: cataloging catalytic sites and residues identified in enzymes

scientific article

The EBI enzyme portal

scientific article

The Human Phenotype Ontology in 2017

scientific article (publication date: 28 November 2016)

The Human Phenotype Ontology in 2024: phenotypes around the world

scientific article published in 2023

The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genes and diseases across species

The Monarch Initiative: an integrative data and analytic platform connecting phenotypes to genotypes across species

scientific article

The Universal Protein Resource (UniProt) 2009

scientific article (publication date: 2009)

The Universal Protein Resource (UniProt) in 2010

scientific article (publication date: 2010)

UniProt Knowledgebase: a hub of integrated protein data

scientific article (publication date: 2011)

Using association rule mining to determine promising secondary phenotyping hypotheses

scientific article

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